prot_C-linearis_contig8.15497.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig8.15497.1
Unique Nameprot_C-linearis_contig8.15497.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length526
Homology
BLAST of mRNA_C-linearis_contig8.15497.1 vs. uniprot
Match: D7G585_ECTSI (MCU domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G585_ECTSI)

HSP 1 Score: 273 bits (697), Expect = 5.510e-79
Identity = 174/319 (54.55%), Postives = 211/319 (66.14%), Query Frame = 0
Query:  134 ARARKDRSSRARKTVRREKNMANSRLSALAERVEILQHTLKGERASRKSVETKHRRAQSATIRTSRYLDSILKVNQELVAT-TSGTPEP---QPSPARLSRSRAQRAIQRGEENEYGPPARRAGTMLGGVDVGAAVGEAVVVGRAGGNPVPSLTALYERIGFCAIQGEDGDDEGMQSLPTSPSRVIAGKSHEEHRVQN--DGEGMDRQRLGDRAGVDGFFPNGSPQVMGSPTRWAAGRKLDLDSSGPSGGRGDHEKGNGY-------KGYSFAHSPLAKVTSVAERSPEVLKRLEALASQLERERADVEQWYKEVVHRA 439
            A+ARKDR SRARKT RRE   A+S+L++LA R+E LQ TL  ERASR+S E KH RA+S TIR SRYLDSIL VNQELVA  TS +  P   QP P  L   + +++I+    + Y  P R       G+D+ AAV EA  VGR GG+PVPSLTALYERIGF A+QGEDG   G  SLPTSP R   G + E +R ++  DGE   RQRL +   V GFF     +V+ S  R A+  ++D   S  + G   H  GN +       KGYSFA+SPL + TS AERSPEV+KRLEALASQLERER+DVEQWYK+VVHR+
Sbjct:    6 AQARKDRCSRARKTARRETAAADSQLTSLARRLEKLQRTLDDERASRQSAELKHHRAKSTTIRISRYLDSILNVNQELVAAGTSSSLTPTAGQPVPRALGELQRKQSIR----DSYATPRRNPALEDDGIDIRAAVKEAYCVGRTGGDPVPSLTALYERIGFSAMQGEDGHHGGTPSLPTSPRRARVGNTAEAYRFRDVDDGEDYGRQRLVEPTAVGGFFAEDDAEVLESSRRQASAHQVDDGGSRSANGGKHHGTGNAFVGGGVTAKGYSFANSPLVRPTSAAERSPEVMKRLEALASQLERERSDVEQWYKDVVHRS 320          
BLAST of mRNA_C-linearis_contig8.15497.1 vs. uniprot
Match: A0A6H5KP00_9PHAE (MCU domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP00_9PHAE)

HSP 1 Score: 216 bits (549), Expect = 1.200e-57
Identity = 143/286 (50.00%), Postives = 169/286 (59.09%), Query Frame = 0
Query:  164 ERVEILQHTLKGERASRKSVETKHRRAQSATIRTSRYLDSILKVNQELVATTSGTPEPQPSPARLSRSRAQRAIQRGEE--NEYGPPARRAGTMLGGVDVGAAVGEAVVVGRAGGNPVPSLTALYERIGFCAIQGEDGDDEGMQSLPTSPSRVIAGKSHEEHRVQ--NDGEGMDRQRLGDRAGVDGFFPNGSPQVMGSPTRWAAGRKLDLDSSGPSGGRGDHEKGNGY-------KGYSFAHSPLAKVTSVAERSPEVLKRLEALASQLERERADVEQWYKEVVHR 438
            E ++ LQ TL  ER+SR+S E KH RA+S TIR  RYLDSIL VNQELVA  +GTP      AR    RA   +QR +   + Y  P + +     G+D+ AAV EA+ VGR GG+PVPSL ALYERIGF AIQGED    G  SLPTSP R   G + E +R +  +DGE   RQRL +     G                          S P+ G   H  GN +       KGYSFA+SPL + TS AERSPEV KRLEALASQLERER+DVEQWYK+VVHR
Sbjct:   98 EHLQKLQRTLNDERSSRQSTEFKHHRAKSTTIRIGRYLDSILNVNQELVA--AGTPSSLTPTARQPVPRALGELQRKQSIRDSYATPRQNSALEGDGIDIRAAVNEALGVGRTGGDPVPSLAALYERIGFSAIQGEDRHHGGAPSLPTSPRRARVGNAAEAYRSRYVHDGEDYGRQRLVEPTAAGGXXXXXXXXXXXXXXXXXXXXXXXXGGSRPANGGKHHGIGNAFVGGAVAAKGYSFANSPLVRPTSAAERSPEVAKRLEALASQLERERSDVEQWYKDVVHR 381          
BLAST of mRNA_C-linearis_contig8.15497.1 vs. uniprot
Match: A0A7R9YA16_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YA16_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 8.590e-15
Identity = 64/212 (30.19%), Postives = 119/212 (56.13%), Query Frame = 0
Query:    1 MSEVHSSRAVLAALKGLQKKVRHLEDERTKAVEEVQTLKAELTRRQEDFKDTQELQNLTIQEESAASRLSYERLLSDKRVVDIRLDETEGVKQELQQACETARNRGQDAHVAQLAAETKVSILEGRVNECGQTARARKDRSSRARKTVRREKNMANSRLSALAERVEILQHTLKGERASRKSVETKHRRAQSATIRTSRYLDSILKVNQELV 212
            MS+   SRAVL+AL+ LQ K++ LE ER+KA++EV  LK +L   +   K ++EL+ LT  E+  ASRL+ ER+ ++K+VV++RL + E  K  L++  +  R    ++ +A+  A+  +S+++G V E        K + + A + + +E++  + R   L   ++ ++  L+ E+  R    T+  R          +L  ++ +N++LV
Sbjct:  222 MSDSSGSRAVLSALRALQDKIKRLEGERSKALDEVNALKQQLEEAEASAKRSRELEKLTNSEQVHASRLANERVTAEKKVVEMRLSKAEEHKASLRKEIDALRKAASESEIARRTADGNLSVVQGHVRELEGELDDMKAQLAVAHEELAKERDERDQREIELGVVIQKIEEQLREEKTMRCEAVTEKERLDE-------FLKGVVAINEDLV 426          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig8.15497.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G585_ECTSI5.510e-7954.55MCU domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5KP00_9PHAE1.200e-5750.00MCU domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7R9YA16_9STRA8.590e-1530.19Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 7..41
NoneNo IPR availableCOILSCoilCoilcoord: 85..105
NoneNo IPR availableCOILSCoilCoilcoord: 411..434
IPR025913Cep57 centrosome localisation domainPFAMPF14073Cep57_CLDcoord: 9..66
e-value: 7.4E-7
score: 29.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig8contigC-linearis_contig8:750075..753650 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig8.15497.1mRNA_C-linearis_contig8.15497.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig8 750040..754639 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig8.15497.1 ID=prot_C-linearis_contig8.15497.1|Name=mRNA_C-linearis_contig8.15497.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=526bp
MSEVHSSRAVLAALKGLQKKVRHLEDERTKAVEEVQTLKAELTRRQEDFK
DTQELQNLTIQEESAASRLSYERLLSDKRVVDIRLDETEGVKQELQQACE
TARNRGQDAHVAQLAAETKVSILEGRVNECGQTARARKDRSSRARKTVRR
EKNMANSRLSALAERVEILQHTLKGERASRKSVETKHRRAQSATIRTSRY
LDSILKVNQELVATTSGTPEPQPSPARLSRSRAQRAIQRGEENEYGPPAR
RAGTMLGGVDVGAAVGEAVVVGRAGGNPVPSLTALYERIGFCAIQGEDGD
DEGMQSLPTSPSRVIAGKSHEEHRVQNDGEGMDRQRLGDRAGVDGFFPNG
SPQVMGSPTRWAAGRKLDLDSSGPSGGRGDHEKGNGYKGYSFAHSPLAKV
TSVAERSPEVLKRLEALASQLERERADVEQWYKEVVHRASPGAQDEGTDA
DLDASSLTKAIACLQEKAQQIDVVQESLKAFKTPPPTSTVASPTVCRRKK
AALHVLQGLCHDVVGGGENCGLNAA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025913Cep57_CLD