prot_C-linearis_contig8.15475.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig8.15475.1
Unique Name	prot_C-linearis_contig8.15475.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	222

Homology

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BLAST of mRNA_C-linearis_contig8.15475.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE)

HSP 1 Score: 240 bits (613), Expect = 2.240e-70
Identity = 157/267 (58.80%), Postives = 173/267 (64.79%), Query Frame = 0

Query:    1 CAEALQTDFSRRWGDGTDVLAYKEGGRRQPCGFRKEQVLATALDPRSKSLYGIDEDEQPGVWEEVAKAAVEVAIEVKAA---------------------------------------------GGTQSAGASSSPISVEPAAASLPQLQPXXXXXXXXXXXXXXXXXXXQGAVASSSDARHQLESIVKRELDSFMTAPGIGVSWEDRGQLVRGKPLECWRVKAREYPTLAALARRVLCIPASQAQSERVFSTAGLVVTKTRSRLDP 222
            CA+ALQTD SRRWGD TDVL Y EG RRQP GF+KEQVLATAL PRSKSLYGI+E E   VW+  A  AV+VAIE KA                                                TQSAGASSSPI VEPA         XXXXXXXXXXXXX      Q A ASSS  R Q+ESI+ RE+D+F   PG+ VSWE++GQ VRGKPLE WRVKAREYP LA+LARRVLCIPA QAQSERVFS+AGLVVTKTR+R+DP
Sbjct:  269 CAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQSAGASSSPIPVEPAX----XXXXXXXXXXXXXXXXXAHGDKQQSANASSSPLRRQMESIISREVDAFKITPGLAVSWEEKGQEVRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDP 531

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BLAST of mRNA_C-linearis_contig8.15475.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI)

HSP 1 Score: 174 bits (441), Expect = 9.670e-48
Identity = 119/234 (50.85%), Postives = 148/234 (63.25%), Query Frame = 0

Query:    2 AEALQTDFSRRWGDGTDVLAYKEGGRRQPCGFRKEQVLATALDPRSKSLYGIDEDEQPGVWEEVAKAAVEVAIEVKAAGGTQSAGA---SSSPISVEPA-------AASLPQLQPXXXXXXXXXXXXXXXXXXXQGAVASSSDARHQLESIVKRELDSFMTAPGIGVSWEDR-----GQLVRGKPLECWRVKAREYPTLAALARRVLCIPASQAQSERVFSTAGLVVTKTRSRL 220
            AEAL  DF+ RWGDG+++L Y+EG RRQP GF+++QV ATALDPR+K LYGI + E  GVW  VA AAV++A+  K AG    A A   +S P+  +PA       A+  P++             XXXXXXXX     S+ + R QL +IV  E+ +F  APGI V W+ +      + V   PL+ WR K  EYP LAALARRVL IP+SQAQSERVFSTAGL VT TRSRL
Sbjct:  306 AEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAAVDIALG-KHAGDKAPASAEKPASDPVQTQPAPLGGGQGASKRPRMS-----AFEAAAAXXXXXXXXXXXXXSADEKREQLVAIVDMEVSAFKAAPGIRV-WDMQKTNTGDKKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRL 532

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BLAST of mRNA_C-linearis_contig8.15475.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 7.860e-40
Identity = 113/230 (49.13%), Postives = 144/230 (62.61%), Query Frame = 0

Query:    4 ALQTDFSRRWGDGTDVLAYKEGGRRQPCGFRKEQVLATALDPRSKSLYGIDEDEQPGVWEEVAKAAVEVAIEVKAAGGTQSAGASSSPISVEPAAASLPQLQPXXXXXXXXXXXXXXXXXXXQGAV----------ASSSDARHQLESIVKRELDSFMTAPGIGVSWEDR-GQLVRGKPLECWRVKAREYPTLAALARRVLCIPASQAQSERVFSTAGLVVTKTRSRLDP 222
            + Q DF  RWGDG ++L YKEG RRQP GF+  QVLATALDPR+K LYG+DEDE+  VW+ V + AV++A+E + +  +Q A +   P               XXXXXXXXXXXXXXXXXX Q             A SS  R  + S V+ EL +F  + GI +  ED+ G  V   PL+ WRV+  ++P LA LARRVL IPA+QA+SER+FS AG +VTK R+ L P
Sbjct:   46 STQPDFINRWGDGRNILIYKEGRRRQPGGFKPVQVLATALDPRTKILYGVDEDEKADVWKLVEEEAVKIAVETRNSENSQRASSQQGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQAVGGARTPQLDEGADSSFVR-LITSSVRVELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAP 274

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BLAST of mRNA_C-linearis_contig8.15475.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 4.360e-38
Identity = 94/213 (44.13%), Postives = 122/213 (57.28%), Query Frame = 0

Query:    2 AEALQTDFSRRWGDGTDVLAYKEGGRRQPCGFRKEQVLATALDPRSKSLYGIDEDEQPGVWEEVAKAAVEVAIEVKAAGGTQSAGAS--SSPISVEPAAASLPQLQPXXXXXXXXXXXXXXXXXXXQGAVASSS------DARHQLESIVKRELDSFMTAPGIGV-SWEDRGQLVRGKPLECWRVKAREYPTLAALARRVLCIPASQAQSERV 205
            AEAL  DF  RWGDG+ +L Y+EG RRQP GF+ +QV ATA+DPR+K LYGI + E   VW  VA  AV++A E  ++  T ++G++  + P+   P A   P  Q                     GA ASS+      + R QL S+V  E+ SF T PGI +  W   G+ V   PL+ WR +  E+P LAALARRVL IP+SQA SERV
Sbjct:  342 AEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAEKFSSDNTATSGSAPAAQPVGTPPVA---PGGQ--GAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549

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BLAST of mRNA_C-linearis_contig8.15475.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 1.150e-36
Identity = 76/100 (76.00%), Postives = 81/100 (81.00%), Query Frame = 0

Query:    1 CAEALQTDFSRRWGDGTDVLAYKEGGRRQPCGFRKEQVLATALDPRSKSLYGIDEDEQPGVWEEVAKAAVEVAIEVKAAGGTQSAGASSSPISVEPAAAS 100
            CA ALQTD SRRW DGTDVL Y EG RRQP GF+K+QVLATALDPRSKSLYGI+E E   VWE VA  AV+VAIE KA   TQSAGASSSPI VEPAAA+
Sbjct:  241 CAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAGASSSPIPVEPAAAA 340

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BLAST of mRNA_C-linearis_contig8.15475.1 vs. uniprot
Match: A0A6H5JJV8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJV8_9PHAE)

HSP 1 Score: 112 bits (280), Expect = 3.120e-25
Identity = 83/194 (42.78%), Postives = 96/194 (49.48%), Query Frame = 0

Query:   29 QPCGFRKEQVLATALDPRSKSLYGIDEDEQPGVWEEVAKAAVEVAIEVKAAGGTQSAGASSSPISVEPAAASLPQLQPXXXXXXXXXXXXXXXXXXXQGAVASSSDARHQLESIVKRELDSFMTAPGIGVSWEDRGQLVRGKPLECWRVKAREYPTLAALARRVLCIPASQAQSERVFSTAGLVVTKTRSRLDP 222
            +P GF+K+QVLATALDPRSKSLYGI+E E   VWE VA  AV+VAIE KA   TQSAGASSS I VEPA                                     A          +  +    PG      D+ Q                    ++   RVLCIPASQ QSERVFS+AGLVVTKTR+R+DP
Sbjct:  325 EPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATEDTQSAGASSSLIPVEPA-------------------------------------AXXXXXXXXXXDFAAASAVPG------DKQQSANA----------------SSSTSRVLCIPASQPQSERVFSSAGLVVTKTRARMDP 459

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BLAST of mRNA_C-linearis_contig8.15475.1 vs. uniprot
Match: A0A6H5JVE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVE5_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 1.400e-20
Identity = 47/84 (55.95%), Postives = 63/84 (75.00%), Query Frame = 0

Query:    1 CAEALQTDFSRRWGDGTDVLAYKEGGRRQPCGFRKEQVLATALDPRSKSLYGIDEDEQPGVWEEVAKA-AVEVAIEVKAAGGTQ 83
            C +AL+ DF  RWGDG ++L YKEG RRQP GF+  QVLATALDPR+K L+G+DEDE+  VW+ V +  AV++A+E + A  +Q
Sbjct:    3 CIKALRDDFINRWGDGRNILIYKEGPRRQPAGFKPVQVLATALDPRTKILHGVDEDEKADVWKLVQEEEAVKIAVETRNAENSQ 86

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BLAST of mRNA_C-linearis_contig8.15475.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 3.460e-19
Identity = 45/83 (54.22%), Postives = 61/83 (73.49%), Query Frame = 0

Query:    1 CAEALQTDFSRRWGDGTDVLAYKEGGRRQPCGFRKEQVLATALDPRSKSLYGIDEDEQPGVWEEVAKAAVEVAIEVKAAGGTQ 83
            C +AL+ D+  RWGDG ++L YKEG RRQP GF+   VLATALDPR+K  YG+DEDE+  VW+ V + AV++A+E + A  +Q
Sbjct:  242 CIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAVETRNAENSQ 324

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BLAST of mRNA_C-linearis_contig8.15475.1 vs. uniprot
Match: UPI000B905A76 (zinc finger BED domain-containing protein 1-like n=1 Tax=Acanthochromis polyacanthus TaxID=80966 RepID=UPI000B905A76)

HSP 1 Score: 70.5 bits (171), Expect = 7.030e-11
Identity = 42/95 (44.21%), Postives = 55/95 (57.89%), Query Frame = 0

Query:  128 AVASSSDARHQLESIVKRELDSFMTAPGIGVSWEDRGQLVRGKPLECWRVKAREYPTLAALARRVLCIPASQAQSERVFSTAGLVVTKTRSRLDP 222
            A A+SS A  QLE   + EL+S++  P I    ED        PL  W+V    +P L  +AR+ LC+PA+ A SER+FST G +VT TRS L P
Sbjct:  183 AAAASSSAPVQLEDATEAELNSYLMTPTIDGE-ED--------PLAWWKVHKINFPRLCNMARKYLCVPATSAPSERLFSTGGNIVTCTRSSLKP 268

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BLAST of mRNA_C-linearis_contig8.15475.1 vs. uniprot
Match: UPI000DF2B790 (zinc finger BED domain-containing protein 1-like n=14 Tax=Pseudocrenilabrinae TaxID=318546 RepID=UPI000DF2B790)

HSP 1 Score: 67.0 bits (162), Expect = 1.440e-10
Identity = 40/93 (43.01%), Postives = 54/93 (58.06%), Query Frame = 0

Query:  130 ASSSDARHQLESIVKRELDSFMTAPGIGVSWEDRGQLVRGKPLECWRVKAREYPTLAALARRVLCIPASQAQSERVFSTAGLVVTKTRSRLDP 222
            A+SS     LE +V+ EL+S++  P I    ED        PL  W+V    +P L  +AR+ LC+PA+ A SER+FST G +VT TRS L P
Sbjct:   45 AASSALPLPLEDVVEAELNSYLLTPVI--DGED-------DPLAWWKVHNIHFPRLCKMARKYLCVPATSAPSERLFSTGGNIVTCTRSSLKP 128

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig8.15475.1 vs. uniprot

BLAST of mRNA_C-linearis_contig8.15475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JHP9_9PHAE	2.240e-70	58.80	Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 13...	[more]
D8LCS5_ECTSI	9.670e-48	50.85	Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ec...	[more]
A0A6H5JWI1_9PHAE	7.860e-40	49.13	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5KUY5_9PHAE	4.360e-38	44.13	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KVI1_9PHAE	1.150e-36	76.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JJV8_9PHAE	3.120e-25	42.78	Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec...	[more]
A0A6H5JVE5_9PHAE	1.400e-20	55.95	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L7Y8_9PHAE	3.460e-19	54.22	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
UPI000B905A76	7.030e-11	44.21	zinc finger BED domain-containing protein 1-like n...	[more]
UPI000DF2B790	1.440e-10	43.01	zinc finger BED domain-containing protein 1-like n...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 147..222 e-value: 6.0E-15 score: 54.8
None	No IPR available	PANTHER	PTHR46169	FAMILY NOT NAMED	coord: 38..220
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 38..222

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig8	contig	C-linearis_contig8:541379..542044 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig8.15475.1	mRNA_C-linearis_contig8.15475.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig8 541379..542045 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig8.15475.1 ID=prot_C-linearis_contig8.15475.1|Name=mRNA_C-linearis_contig8.15475.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=222bp
CAEALQTDFSRRWGDGTDVLAYKEGGRRQPCGFRKEQVLATALDPRSKSL
YGIDEDEQPGVWEEVAKAAVEVAIEVKAAGGTQSAGASSSPISVEPAAAS
LPQLQPPRRRRFAAAAAAAAHGAPPQGAVASSSDARHQLESIVKRELDSF
MTAPGIGVSWEDRGQLVRGKPLECWRVKAREYPTLAALARRVLCIPASQA
QSERVFSTAGLVVTKTRSRLDP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR008906	HATC_C_dom
IPR012337	RNaseH-like_sf