prot_C-linearis_contig79.15418.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig79.15418.1
Unique Nameprot_C-linearis_contig79.15418.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length268
Homology
BLAST of mRNA_C-linearis_contig79.15418.1 vs. uniprot
Match: D8LJE5_ECTSI (Putative ubiquitously-expressed transcript variant 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJE5_ECTSI)

HSP 1 Score: 185 bits (469), Expect = 1.030e-55
Identity = 94/112 (83.93%), Postives = 101/112 (90.18%), Query Frame = 0
Query:  155 RIAKIKHEMGQYAELKGKLSSIMVREEEGPLEMLTDLGADCFAKVKVDDPSRVFVLVALGFHVEFTLPEAISFADVKRASLTGALSKLRDREAEVTRDIVSAESMIRDLRNL 266
            R+AK++HEMGQYAELK KLS IMVREE+GPLEMLTDLGADCFAKVKV DPS+VFV VALGFHVEFTLPEAISFADVKR+SL  A +KLRD EAEV RDI SAESMIRDLR L
Sbjct:   33 RVAKVEHEMGQYAELKEKLSGIMVREEDGPLEMLTDLGADCFAKVKVQDPSKVFVKVALGFHVEFTLPEAISFADVKRSSLASAAAKLRDSEAEVARDIASAESMIRDLRAL 144          
BLAST of mRNA_C-linearis_contig79.15418.1 vs. uniprot
Match: L8H843_ACACA (Prefoldin, alpha subunit n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H843_ACACA)

HSP 1 Score: 70.1 bits (170), Expect = 2.650e-11
Identity = 41/110 (37.27%), Postives = 64/110 (58.18%), Query Frame = 0
Query:  158 KIKHEMGQYAELKGKLSSIMVREEEGPLEMLTDLGADCFAKVKVDDPSRVFVLVALGFHVEFTLPEAISFADVKRASLTGALSKLRDREAEVTRDIVSAESMIRDLRNLA 267
            K+  ++  Y  LK  L +I   E +   + L +LG++ + + KV D S+VFV V LGFHVEFT  EA+SF ++K A LTG +++L +    +   I +  + I +L  LA
Sbjct:   34 KLLRQIADYMTLKNNLLAIEKNELKA-FKTLVNLGSEFYIQAKVPDASKVFVNVGLGFHVEFTPKEALSFIELKEAHLTGRVNELAETANSIKSRIRTMYTGIAELMKLA 142          
BLAST of mRNA_C-linearis_contig79.15418.1 vs. uniprot
Match: A0A388K4G4_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388K4G4_CHABU)

HSP 1 Score: 69.7 bits (169), Expect = 9.670e-11
Identity = 37/109 (33.94%), Postives = 63/109 (57.80%), Query Frame = 0
Query:  158 KIKHEMGQYAELKGKLSSIMVREEEGPLEMLTDLGADCFAKVKVDDPSRVFVLVALGFHVEFTLPEAISFADVKRASLTGALSKLRDREAEVTRDIVSAESMIRDLRNL 266
            KI  E+  Y +L+  +  + V +    +  + +LG++ +A+ ++DD S +FV + LGFHVEFTL EA++F D+K+ SLT  +     + A++   I      IR+L  L
Sbjct:   73 KINEELKSYRDLEKSIRLLQVNDLTS-MRSMVNLGSEVYAQAQIDDTSHLFVDIGLGFHVEFTLQEALNFIDLKQKSLTAKVDAYTSQIADIKSQIKLFCEGIRELMRL 180          
BLAST of mRNA_C-linearis_contig79.15418.1 vs. uniprot
Match: A0A0L0SIY8_ALLM3 (Prefoldin, alpha subunit n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0SIY8_ALLM3)

HSP 1 Score: 63.2 bits (152), Expect = 7.180e-9
Identity = 31/80 (38.75%), Postives = 53/80 (66.25%), Query Frame = 0
Query:  158 KIKHEMGQYAELKGKLSSIMVREEEGPLEMLT--DLGADCFAKVKVDDPSRVFVLVALGFHVEFTLPEAISFADVKRASL 235
            ++ +++ +Y +L  ++  +   +E G  E+ T  DLG++ F + K+ D + ++V VA GFHV+FTLPEAI+FAD K+  L
Sbjct:   32 QVYNQISEYGKLANQIKML---QETGSKELKTQVDLGSNFFVQAKIPDTTYIYVQVAFGFHVQFTLPEAIAFADKKQLQL 108          
BLAST of mRNA_C-linearis_contig79.15418.1 vs. uniprot
Match: A0A0S7LD52_9TELE (UXT (Fragment) n=2 Tax=Poeciliinae TaxID=586240 RepID=A0A0S7LD52_9TELE)

HSP 1 Score: 61.6 bits (148), Expect = 2.190e-8
Identity = 38/111 (34.23%), Postives = 59/111 (53.15%), Query Frame = 0
Query:  158 KIKHEMGQYAELKGKLSSIMVREEEGP--LEMLTDLGADCFAKVKVDDPSRVFVLVALGFHVEFTLPEAISFADVKRASLTGALSKLRDREAEVTRDIVSAESMIRDLRNL 266
            ++  +M  Y +LK  + ++   EE GP  L+   DLG   F + +VD+PSR+ VLV  GF VE +  EA+ F D K   LT  + +L    A++   I      +R+L+ L
Sbjct:    8 RLYEKMSHYLQLKNAIQTL---EEAGPQRLKADVDLGCSFFVQARVDNPSRILVLVGFGFFVEMSHQEALRFIDKKTNQLTLFIEQLTKDVAKIKAHIRMVLEGLRELQGL 115          
BLAST of mRNA_C-linearis_contig79.15418.1 vs. uniprot
Match: A0A3B5MRG0_9TELE (Ubiquitously expressed prefoldin like chaperone n=8 Tax=Poeciliinae TaxID=586240 RepID=A0A3B5MRG0_9TELE)

HSP 1 Score: 62.0 bits (149), Expect = 3.060e-8
Identity = 39/111 (35.14%), Postives = 58/111 (52.25%), Query Frame = 0
Query:  158 KIKHEMGQYAELKGKLSSIMVREEEGP--LEMLTDLGADCFAKVKVDDPSRVFVLVALGFHVEFTLPEAISFADVKRASLTGALSKLRDREAEVTRDIVSAESMIRDLRNL 266
            ++  +M  Y +LK  + S+   EE GP  L+   DLG   F + +VD+PSR+ VLV  GF VE +  EA+ F D K   LT    +L    A++   I      +R+L+ L
Sbjct:   40 RLYEKMSHYLQLKNAIQSL---EEAGPQRLKADVDLGCSFFVQARVDNPSRILVLVGFGFFVEMSHQEALRFIDKKTNQLTLFTEQLTKDAAKIKAHIRMVLEGLRELQGL 147          
BLAST of mRNA_C-linearis_contig79.15418.1 vs. uniprot
Match: A0A0L0TD50_ALLM3 (Prefoldin, alpha subunit n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0TD50_ALLM3)

HSP 1 Score: 61.2 bits (147), Expect = 3.590e-8
Identity = 34/90 (37.78%), Postives = 56/90 (62.22%), Query Frame = 0
Query:  149 IRSDPIRIAKIKHEMGQYAELKGKL-SSIMVREEEGPLEMLT--DLGADCFAKVKVDDPSRVFVLVALGFHVEFTLPEAISFADVKRASL 235
            +R D  ++  ++ ++       GKL + I + +E G  E+ T  DLG++ F + K+ D + ++V VA GFHV+FTLPEAI+FA+ K+  L
Sbjct:   19 LRPDLDQVLGLRDQVYSQISDYGKLVNQIKLLQETGAKELKTQVDLGSNFFVQAKIPDTTYIYVQVAFGFHVQFTLPEAIAFAEKKQKQL 108          
BLAST of mRNA_C-linearis_contig79.15418.1 vs. uniprot
Match: A0A0S7LD04_9TELE (UXT (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7LD04_9TELE)

HSP 1 Score: 59.7 bits (143), Expect = 8.980e-8
Identity = 37/106 (34.91%), Postives = 57/106 (53.77%), Query Frame = 0
Query:  158 KIKHEMGQYAELKGKLSSIMVREEEGP--LEMLTDLGADCFAKVKVDDPSRVFVLVALGFHVEFTLPEAISFADVKRASLTGALSKLRDREAEVTRDIVSAESMIR 261
            ++  +M  Y +LK  + ++   EE GP  L+   DLG   F + +VD+PSR+ VLV  GF VE +  EA+ F D K   LT  + +L       T+D+   ++ IR
Sbjct:    8 RLYEKMSHYLQLKNAIQTL---EEAGPQRLKADVDLGCSFFVQARVDNPSRILVLVGFGFFVEMSHQEALRFIDKKTNQLTLFIEQL-------TKDVAKIKAHIR 103          
BLAST of mRNA_C-linearis_contig79.15418.1 vs. uniprot
Match: D8LZK2_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8LZK2_BLAHO)

HSP 1 Score: 58.2 bits (139), Expect = 1.500e-7
Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 0
Query:  177 MVREEEGPLEMLTDLGADCFAKVKVDDPSRVFVLVALGFHVEFTLPEAISFADVKRASL-TGALSKLRDREAE 248
            M +E +  +  L ++G++ + + K +D S +FV + +GFHVEFTL EA+ F D K A L T  + K  D E E
Sbjct:    1 MKKETKSTMRSLVNIGSEVYVQAKAEDRSHIFVNIGMGFHVEFTLDEALDFIDKKLAKLKTDVVLKNADVERE 73          
BLAST of mRNA_C-linearis_contig79.15418.1 vs. uniprot
Match: A0A8J4YHQ2_CHIOP (Protein UXT n=1 Tax=Chionoecetes opilio TaxID=41210 RepID=A0A8J4YHQ2_CHIOP)

HSP 1 Score: 59.3 bits (142), Expect = 2.060e-7
Identity = 31/107 (28.97%), Postives = 59/107 (55.14%), Query Frame = 0
Query:  158 KIKHEMGQYAELKGKLSSIMVREEEGPLEMLTDLGADCFAKVKVDDPSRVFVLVALGFHVEFTLPEAISFADVKRASLTGALSKLRDREAEVTRDIVSAESMIRDLR 264
            K+  ++  +++LK  +  I+   ++  L    DL ++ + + +V D S ++V + LG+HVEFTL EA+++ D K   L   LS+   + A++   I      IR+L+
Sbjct:   31 KLYEDIATHSQLKQTIHCIIESPDQDGLRTQVDLCSNFYVQAQVPDTSHIYVNIGLGYHVEFTLQEALTYIDKKLKFLNSKLSESTKKSAKIKGHIKFVYEGIRELQ 137          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig79.15418.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJE5_ECTSI1.030e-5583.93Putative ubiquitously-expressed transcript variant... [more]
L8H843_ACACA2.650e-1137.27Prefoldin, alpha subunit n=1 Tax=Acanthamoeba cast... [more]
A0A388K4G4_CHABU9.670e-1133.94Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A0L0SIY8_ALLM37.180e-938.75Prefoldin, alpha subunit n=1 Tax=Allomyces macrogy... [more]
A0A0S7LD52_9TELE2.190e-834.23UXT (Fragment) n=2 Tax=Poeciliinae TaxID=586240 Re... [more]
A0A3B5MRG0_9TELE3.060e-835.14Ubiquitously expressed prefoldin like chaperone n=... [more]
A0A0L0TD50_ALLM33.590e-837.78Prefoldin, alpha subunit n=1 Tax=Allomyces macrogy... [more]
A0A0S7LD04_9TELE8.980e-834.91UXT (Fragment) n=1 Tax=Poeciliopsis prolifica TaxI... [more]
D8LZK2_BLAHO1.500e-739.73Uncharacterized protein n=1 Tax=Blastocystis homin... [more]
A0A8J4YHQ2_CHIOP2.060e-728.97Protein UXT n=1 Tax=Chionoecetes opilio TaxID=4121... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009053PrefoldinGENE3D1.10.287.370coord: 154..265
e-value: 6.5E-11
score: 44.0
IPR004127Prefoldin alpha-likePFAMPF02996Prefoldincoord: 156..261
e-value: 2.2E-12
score: 47.0
NoneNo IPR availablePANTHERPTHR13345:SF4PROTEIN UXTcoord: 158..265
NoneNo IPR availablePANTHERPTHR13345NUT2 AND UXTcoord: 158..265
NoneNo IPR availableSUPERFAMILY46579Prefoldincoord: 165..265

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig79contigC-linearis_contig79:491242..492693 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig79.15418.1mRNA_C-linearis_contig79.15418.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig79 491115..493203 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig79.15418.1 ID=prot_C-linearis_contig79.15418.1|Name=mRNA_C-linearis_contig79.15418.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=268bp
MRSNRAIVLSKPLKIDPCGRGLHLQQSRPTNPPFSLLSPLSVGVLYEYRE
RALHIGSEIHCSAFAQKQLTYQPRLLRFVALLKFENECDPCPVLVREGRR
HSSYRNLLVKHVHNVEQGFRERQNPTTQPMELSISPIACFHFIDRPDPIR
SDPIRIAKIKHEMGQYAELKGKLSSIMVREEEGPLEMLTDLGADCFAKVK
VDDPSRVFVLVALGFHVEFTLPEAISFADVKRASLTGALSKLRDREAEVT
RDIVSAESMIRDLRNLA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009053Prefoldin
IPR004127Prefoldin_subunit_alpha