prot_C-linearis_contig79.15416.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig79.15416.1
Unique Nameprot_C-linearis_contig79.15416.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length345
Homology
BLAST of mRNA_C-linearis_contig79.15416.1 vs. uniprot
Match: D8LJE8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJE8_ECTSI)

HSP 1 Score: 469 bits (1208), Expect = 6.110e-164
Identity = 244/309 (78.96%), Postives = 262/309 (84.79%), Query Frame = 0
Query:    1 MSPPRACRLLAMLMGTAGMVSAFFGTPVALSPAASRPSVASTSAGRAXXXXXXXXXXXXXXXXXXXXXXXXSMGLVDAVPDKLKNVFASKPKPTSRRGRTEGAEMYRTLGVTPDADYLEVMEACDRLKVKYADDRKQVIRIDKAKDGILSLRLNQAVKGNIKTNEEAQQMDSYLTAKEAYIKKRDSPWRRPVWAKGWIKVPDKVHTKRCALRHGCMAGFVLAFPSASMGAKLVGAMTTFGMTMNRDGPDLKRDENGQVAEVRLPSKLSTAMSFLTVIGCVFFGVSLGGTFSQFIGNRFLIRETWMDMTV 309
            MSP RACRLLA  MGTAGM SAF GTPVALS AASRP+VAS+S  RA                        SMGLVDAVPDKLKNVFASKPKPTSRRGRTEGAE+YRTLGVTPDADYLEVMEACDRLKVKYA DRKQVIR+DKAKDGILSLRLNQAVKGNIKTNEEAQ MDSYLTAKEAYIK+RDSPW+RP WAKGW+KVPDKVH KRCA RHG MA FVLAFPSA MG KL+G MTTFGMTMNRDGP+LKRD+NGQVAEVRLPSKLS+AMSFL VIG +F G ++GGTFSQ+IGNR LIR+TWMD++V
Sbjct:    1 MSPQRACRLLATFMGTAGMASAFLGTPVALSSAASRPTVASSSV-RARGRCAPGAVSV-------------SMGLVDAVPDKLKNVFASKPKPTSRRGRTEGAELYRTLGVTPDADYLEVMEACDRLKVKYASDRKQVIRVDKAKDGILSLRLNQAVKGNIKTNEEAQNMDSYLTAKEAYIKQRDSPWQRPTWAKGWVKVPDKVHGKRCATRHGLMALFVLAFPSAGMGVKLIGGMTTFGMTMNRDGPELKRDDNGQVAEVRLPSKLSSAMSFLAVIGSIFVGSAVGGTFSQYIGNRILIRDTWMDLSV 295          
BLAST of mRNA_C-linearis_contig79.15416.1 vs. uniprot
Match: A0A7J7IDN1_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IDN1_9RHOD)

HSP 1 Score: 87.0 bits (214), Expect = 1.190e-15
Identity = 59/193 (30.57%), Postives = 93/193 (48.19%), Query Frame = 0
Query:   88 ASKPKPTSRR-----GRTEGAEMYRTLGVTPDADYLEVMEACDRLKVKYADDRKQVIRIDKAKDGILSLRLNQAVKGNIKTNEEAQQMDSYLTAKEAYIKKR--DSPWRRPVWA-----------KGWIKVPDKVHTKRCALRHGCMAGFVLAFPSASMGAKLVGAMTTFGMTMNRDGPDLKRDENGQVAEVR 262
            A K   TSRR     G  +G+  YRTLGV+  A + E+  A + LK+KYADD KQ+ +++  +D I   +L + ++G ++              +E+ ++KR    PW +  W             G  KVPD  + +R  +  G +A   L  P  +  A  +  MT+     NR  P+++RDE G + EVR
Sbjct:   74 APKDVSTSRRRRIDTGSEDGSNPYRTLGVSESATFEEIQAAFENLKIKYADDMKQLTKLEVLRDKIFDDKLRRRLQGKLQG-----------IVRESPLEKRFRQQPWWKTTWIGQQITTPGGLLHGIFKVPDMKYFRRTTIIMGILAILGLLVPRFATSALPIACMTSMAFLYNRGQPEVRRDEFGNIGEVR 255          
BLAST of mRNA_C-linearis_contig79.15416.1 vs. uniprot
Match: M1V6B1_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1V6B1_CYAM1)

HSP 1 Score: 74.3 bits (181), Expect = 2.900e-11
Identity = 53/194 (27.32%), Postives = 94/194 (48.45%), Query Frame = 0
Query:   88 ASKPKPTSRRGRT-----EGAEMYRTLGVTPDADYLEVMEACDRLKVKYADDRKQVIRIDKAKDGILSLRLNQAVKGNIKTNEEAQQMDSYLTAKEAYIKKRDSPWRRPVWAK-----------GWIKVPDKVHTKRCALRH---GCMAGFVLAFPSASMGAKLVGAMTTFGMTMNRDGPDLKRDENGQVAEVR 262
            +++   +S R RT     +G   YR LGV+  A + E+ EA ++LK+KYADD KQ+ +++  +D I   +L + ++G ++       ++  L         R  PW +  W             G  KVP+K + ++ ++     G +  F+  F ++S+    +   T+     NR  P+++RDE G V EVR
Sbjct:   74 STRDSSSSSRRRTGTGFGDGTNPYRELGVSESATFEEIQEAFEKLKIKYADDFKQLSKLEVLRDKIFDDKLRRRLQGKLEGIVRESPLEKRL---------RKQPWWKTSWLGRQLTSPGGLLYGIFKVPEKQYLRKTSIIMAILGLLGFFIPRFATSSLPISFI---TSMAFLYNRGQPEVRRDEFGNVGEVR 255          
BLAST of mRNA_C-linearis_contig79.15416.1 vs. uniprot
Match: A0A8J5XDM9_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XDM9_DIALT)

HSP 1 Score: 67.0 bits (162), Expect = 4.720e-9
Identity = 49/186 (26.34%), Postives = 95/186 (51.08%), Query Frame = 0
Query:  102 GAEMYRTLGVTPDADYLEVMEACDRLKVKYADDRKQVIRIDKAKDGILSLRLNQAVKGNIKTNEEAQQMDSYLTAKEAYIKKRDSPWRRPVWAKGWIKVPDKVHTKRCALRHGCMAGFVLAFPSASMGAKLVGAMTTFGMTMNRDGPDLKRDENGQVAEVRLPSKLSTAMSFLTVIGCVFFGVSLG 287
            G  +YR  G+T DADY E++ A +RL  K A D+K++IR++ AKD IL  RL + + G +    +++ ++S     +   K+R      P + + + + PD+       +    ++G  L  P+ +     +  +   G+  N+  P+ K+++ G+  E++    L + +   T++G +  G SLG
Sbjct:   48 GDNLYRKFGITEDADYDEIVAAYERLCSKNAGDKKELIRLEVAKDRILEDRLRRRMSGAL----QSKVVESSWDRAQRLKKRRPFNEYLPPYVRKFFEKPDEKFAINLGIFFALVSGAALLLPAMASTGMSLAFLVANGVIYNKGLPE-KQEDTGRRTELK---PLLSTLGITTILGGL--GFSLG 223          
BLAST of mRNA_C-linearis_contig79.15416.1 vs. uniprot
Match: A0A7S1U968_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U968_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 6.010e-7
Identity = 48/146 (32.88%), Postives = 74/146 (50.68%), Query Frame = 0
Query:   86 VFASKPK---PTSRRGRTEGAEMYRTLGVTPDADYLEVMEACDRLKVKYADDRKQVIRIDKAKDGILSLRLNQAVKGNIKTNEEAQQMDS----YLTAKEAYIKKRDSPWRRPVWAKGWIKVPDKVHTKRCALRHGCMAGFVLAFP 224
            VF  K +   P++     E A+ YRTLGV  +A++ E+ +  +RL++KY  D K+V  ++ AKD I+ L+L Q + G++     A Q D+    Y  AK    KK+   W R +  + W   P      R A  +GC AG  +  P
Sbjct:   48 VFGRKEEATGPSAEEVARELAKHYRTLGVRAEANFEEIADQTERLRLKYKGDIKKVKMVEIAKDRIMELKLAQRMSGSLAVASGAAQYDAERDIYAKAKG---KKKAPAWMRYI-RRMWCP-PTAQERTRFAAYYGCGAGASILVP 188          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig79.15416.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LJE8_ECTSI6.110e-16478.96Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7J7IDN1_9RHOD1.190e-1530.57Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M1V6B1_CYAM12.900e-1127.32Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
A0A8J5XDM9_DIALT4.720e-926.34Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S1U968_9STRA6.010e-732.88Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021788Protein CHAPERONE-LIKE PROTEIN OF POR1-likePFAMPF11833CPP1-likecoord: 114..319
e-value: 1.1E-10
score: 41.5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..269
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 292..302
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 303..323
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 270..291
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 324..344
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..22
score: 0.621
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 217..239
NoneNo IPR availableTMHMMTMhelixcoord: 273..295

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig79contigC-linearis_contig79:475620..481773 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig79.15416.1mRNA_C-linearis_contig79.15416.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig79 475598..482357 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig79.15416.1 ID=prot_C-linearis_contig79.15416.1|Name=mRNA_C-linearis_contig79.15416.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=345bp
MSPPRACRLLAMLMGTAGMVSAFFGTPVALSPAASRPSVASTSAGRARGR
NSATGAGAGAGAGARAGAVSVSMGLVDAVPDKLKNVFASKPKPTSRRGRT
EGAEMYRTLGVTPDADYLEVMEACDRLKVKYADDRKQVIRIDKAKDGILS
LRLNQAVKGNIKTNEEAQQMDSYLTAKEAYIKKRDSPWRRPVWAKGWIKV
PDKVHTKRCALRHGCMAGFVLAFPSASMGAKLVGAMTTFGMTMNRDGPDL
KRDENGQVAEVRLPSKLSTAMSFLTVIGCVFFGVSLGGTFSQFIGNRFLI
RETWMDMTVQLLLFMGSAFVTTWRDPKDGPSIAKKRGIQGRGRD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021788CPP1-like