prot_C-linearis_contig79.15401.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig79.15401.1
Unique Name	prot_C-linearis_contig79.15401.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	213

Homology

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BLAST of mRNA_C-linearis_contig79.15401.1 vs. uniprot
Match: A0A6H5JHQ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHQ8_9PHAE)

HSP 1 Score: 245 bits (625), Expect = 4.570e-76
Identity = 171/213 (80.28%), Postives = 179/213 (84.04%), Query Frame = 0

Query:    1 LSKASGSVERAIATTDINRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTTLHYSVYHKHLAVSKYLIEAGADLEARPGGIDTPLHVAATKGFCQGMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPLYMAVYNGHLKVVRELVYWYGTDRCTSDGGALALATAASRKQVEIVTFLCDAGV 213
            LSKASGSVERA+ATTDI+R CGDTN TPLMVASVIGSSRVV+DLLRQGASVSVADSDGYT LH+SVYH+HLAVS  LIEAGADLEARPG                   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     NPLLSAYGSLPL  AVYNGHLKVV ELV+WYGTDRCT+DGG LALATAASRK V+IVTFLCDAGV
Sbjct:    5 LSKASGSVERAVATTDIDRRCGDTNHTPLMVASVIGSSRVVKDLLRQGASVSVADSDGYTALHHSVYHRHLAVSISLIEAGADLEARPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLRANANPLLSAYGSLPLGTAVYNGHLKVVSELVHWYGTDRCTNDGGVLALATAASRKHVDIVTFLCDAGV 217

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BLAST of mRNA_C-linearis_contig79.15401.1 vs. uniprot
Match: A0A6H5K1W5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1W5_9PHAE)

HSP 1 Score: 243 bits (621), Expect = 2.640e-72
Identity = 175/209 (83.73%), Postives = 181/209 (86.60%), Query Frame = 0

Query:    5 SGSVERAIATTDINRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTTLHYSVYHKHLAVSKYLIEAGADLEARPGGIDTPLHVAATKGFCQGMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPLYMAVYNGHLKVVRELVYWYGTDRCTSDGGALALATAASRKQVEIVTFLCDAGV 213
            SGSVER IATTDI+R CGDTNQTPLMVASVIGSSRVVRDLLRQGASVS+ADSDGY  LH++VYHKHLAVSK LIEAGADL+ARPGGIDTPLHVAATKGFCQ M XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSA                   ELVYWYGTD CTSDGGALALATAASR QV+IVTFLCDAGV
Sbjct:  399 SGSVERPIATTDIDRRCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSLADSDGYPALHHAVYHKHLAVSKDLIEAGADLDARPGGIDTPLHVAATKGFCQEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSADXXXXXXXXXXXXXXXXXXELVYWYGTDGCTSDGGALALATAASRNQVDIVTFLCDAGV 607

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BLAST of mRNA_C-linearis_contig79.15401.1 vs. uniprot
Match: A0A6H5JL58_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL58_9PHAE)

HSP 1 Score: 213 bits (541), Expect = 1.050e-60
Identity = 159/213 (74.65%), Postives = 168/213 (78.87%), Query Frame = 0

Query:    1 LSKASGSVERAIATTDINRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTTLHYSVYHKHLAVSKYLIEAGADLEARPGGIDTPLHVAATKGFCQGMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPLYMAVYNGHLKVVRELVYWYGTDRCTSDGGALALATAASRKQVEIVTFLCDAGV 213
            LSKASGS +  IATTDI+R CG TNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYT LH++VYHKHLAVSK                                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   NPLLSAYGSLPL MAVY+GHL+VVRELV+WYGTDRCTSDGGALALATAASRK V+IV FLC+AGV
Sbjct:  426 LSKASGSADPTIATTDIDRRCGGTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANANPLLSAYGSLPLGMAVYHGHLEVVRELVHWYGTDRCTSDGGALALATAASRKHVDIVAFLCNAGV 638

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BLAST of mRNA_C-linearis_contig79.15401.1 vs. uniprot
Match: D8LH66_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH66_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 1.430e-59
Identity = 114/175 (65.14%), Postives = 118/175 (67.43%), Query Frame = 0

Query:    1 LSKASGSVERAIATTDINRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTTLHYSVYHKHLAVSKYLIEAGADLEARPGGIDTPLHVAATKGFCQGMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPLYMAVYNGHLKVVREL 175
            LSKASGS++  IATT I+RGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDG T LH+SVYH HLAVSK LIEAGADLEAR GG DTPLHVAATKGFCQGM                                         NPLLSA GSLPLYMAVYN  L   R L
Sbjct:    5 LSKASGSIDPTIATTGIDRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGCTALHHSVYHNHLAVSKDLIEAGADLEARHGGKDTPLHVAATKGFCQGM------KLLMDSRLDDGATPLFLAASDGRLEAVRVLLRANANPLLSACGSLPLYMAVYNRPLVRNRSL 173

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BLAST of mRNA_C-linearis_contig79.15401.1 vs. uniprot
Match: A0A6H5L5L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5L0_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 2.010e-51
Identity = 152/214 (71.03%), Postives = 157/214 (73.36%), Query Frame = 0

Query:    1 LSKASGSVERAIATTDINRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTTLHYSVYHKHLAVSKYLIEAGADLEARPGGIDTPLHVAATKGFCQGMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPLY-MAVYNGHLKVVRELVYWYGTDRCTSDGGALALATAASRKQVEIVTFLCDAGV 213
            LSKASGS +  IATTDI+R CGDTNQTPLMVASVIG SRVVRDLLRQGASVSVADSDGYT LH++VYHKHLAVSK                                 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   LSAYGSLPLY M          RELVYWYG DRCTSDGGALAL TAASRK V+IVTFL DAGV
Sbjct:   11 LSKASGSADPTIATTDIDRRCGDTNQTPLMVASVIGPSRVVRDLLRQGASVSVADSDGYTALHHAVYHKHLAVSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSAYGSLPLYIMXXXXXXXXXXRELVYWYGIDRCTSDGGALALVTAASRKHVDIVTFLRDAGV 224

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BLAST of mRNA_C-linearis_contig79.15401.1 vs. uniprot
Match: A0A6H5JNS0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNS0_9PHAE)

HSP 1 Score: 136 bits (343), Expect = 8.450e-35
Identity = 93/191 (48.69%), Postives = 108/191 (56.54%), Query Frame = 0

Query:   31 VASVIGSSRVVRDLLRQGASVSVADSDGYTTLHYSVYHKHLAVSKYLIEAGADLEARPG-----GID-TPLHVAATKGFCQGMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYG--SLPLYMAVYNGHLKVVRELVYWYGTDRCTSDGGALALATAASRKQVEIVTFLCDAGV 213
            VAS +G  RVVR LLR GA VS AD+DG T LH S+ +KHLAVSK L++AGADLEAR       G+  TPLHVAA KGF +GMV                                        NP+L+AY   SLPL +A  NG L VVREL   +G D C+ DGGA AL  AAS+ QV+IVTFL D GV
Sbjct:   37 VASTMGYLRVVRVLLRLGARVSAADNDGATALHLSIVNKHLAVSKALVKAGADLEARIDHHQALGVGCTPLHVAAAKGFHKGMVMLIHAGVKGFVGAKA-------------------------NPILAAYDGESLPLDVAAENGQLGVVRELEQRFGIDGCSCDGGAQALVEAASQNQVDIVTFLFDNGV 202

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BLAST of mRNA_C-linearis_contig79.15401.1 vs. uniprot
Match: A0A6H5KSL5_9PHAE (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6H5KSL5_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 6.600e-32
Identity = 86/224 (38.39%), Postives = 116/224 (51.79%), Query Frame = 0

Query:    4 ASGSVERAI-----ATTDINRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTTLHYSVYHKHLAVSKYLIEAGADLEARPGGI---------DTPLHVAATKGFCQGMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPLYMAVYNGHLKVVRELVYWYGTDRCTSDGGALALATAASRKQVEIVTFLCDAGV 213
            +SGSVER +       T+I+R C +   T LM A+  G  R+VR LLR GA VSV+  DG+T LH+++  ++LAV+K LI+AGA++EA+   +          TPLH+AA +GFC+GMV                                        NPLL    + PL +A + GHL VV+ELV  +G D C  +G   AL TAA      I+TFL DAGV
Sbjct:   26 SSGSVERTLDLLSGGFTEIDRRCDEHGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHTALHFAIGGRNLAVTKALIKAGAEVEAKADLVRMESEVVQGQTPLHLAAGEGFCEGMVALINAGANVDSRMSDGSTAMYIAACLGNLEAVEILFQKKANPLLRVGPTHPLDIATHGGHLGVVQELVQRFGIDGCADEGAIGALETAAYENHEAIMTFLLDAGV 249

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BLAST of mRNA_C-linearis_contig79.15401.1 vs. uniprot
Match: D8LP44_ECTSI (EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP44_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 1.020e-16
Identity = 72/224 (32.14%), Postives = 91/224 (40.62%), Query Frame = 0

Query:    6 GSVERAI-----ATTDINRGCGDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTTLHYSVYHKHLAVSKYLIEAGA-----------DLEARPGGIDTPLHVAATKGFCQGMVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPLLSAYGSLPLYMAVYNGHLKVVRELVYWYGTDRCTSDGGALALATAASRKQVEIVTFLCDAGV 213
            GSVER +       T+I+R C +   T LM A+  G  R+VR LLR GA VSV+  DG+                                  D E   G   TPLH+A  +GFC GMV                                        NP+L    + PL +A + GHL VV+ELV  +G D C+ +G   AL TAA      I+TFL DAGV
Sbjct:   15 GSVERTLDLLSDGFTEIDRRCEENGVTALMCAANKGYLRIVRVLLRFGADVSVSTDDGHXXXXXXXXXXXXXXXXXXXXXXXXXXXKADFLHPDQEVVQG--QTPLHLATGEGFCDGMVALIDAGANVDSRMSNGSTAMYIAACTGNLDAVKILLQERANPMLCVGPTHPLDIATHGGHLGVVQELVQRFGVDGCSDEGAIGALETAAYENHQTILTFLLDAGV 236

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BLAST of mRNA_C-linearis_contig79.15401.1 vs. uniprot
Match: A0A8C5CXW1_GADMO (Palmitoyltransferase n=3 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5CXW1_GADMO)

HSP 1 Score: 63.9 bits (154), Expect = 2.460e-8
Identity = 33/80 (41.25%), Postives = 50/80 (62.50%), Query Frame = 0

Query:   22 GDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTTLHYSVYHKHLAVSKYLIEAGADLEARPGGIDTPLHVAATK 101
            GD + TPL  A   G   +V +LLR GA  S+AD +GY +LH ++ ++HLAV+ YL+  G ++++      TPL +AA K
Sbjct:  133 GDLSSTPLQWAIRQGHLPMVIELLRHGADPSIADGEGYRSLHLAILYQHLAVAAYLMAKGQEVDSPDCNGQTPLMLAAQK 212

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BLAST of mRNA_C-linearis_contig79.15401.1 vs. uniprot
Match: A0A668ADK2_9TELE (Palmitoyltransferase n=4 Tax=Myripristis murdjan TaxID=586833 RepID=A0A668ADK2_9TELE)

HSP 1 Score: 60.8 bits (146), Expect = 2.520e-7
Identity = 32/80 (40.00%), Postives = 47/80 (58.75%), Query Frame = 0

Query:   22 GDTNQTPLMVASVIGSSRVVRDLLRQGASVSVADSDGYTTLHYSVYHKHLAVSKYLIEAGADLEARPGGIDTPLHVAATK 101
            GD N TPL  A   G   +V  LLR GA  S+AD +GY +LH ++  +H+A++ YL+  G +++       TPL +AA K
Sbjct:   77 GDLNSTPLHWAIRQGHLSMVIQLLRCGADPSIADGEGYRSLHLAILFQHMAIAAYLMAKGQEVDGPDCNGQTPLMLAAQK 156

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig79.15401.1 vs. uniprot

BLAST of mRNA_C-linearis_contig79.15401.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JHQ8_9PHAE	4.570e-76	80.28	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K1W5_9PHAE	2.640e-72	83.73	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JL58_9PHAE	1.050e-60	74.65	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LH66_ECTSI	1.430e-59	65.14	EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
A0A6H5L5L0_9PHAE	2.010e-51	71.03	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JNS0_9PHAE	8.450e-35	48.69	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KSL5_9PHAE	6.600e-32	38.39	Uncharacterized protein n=2 Tax=root TaxID=1 RepID...	[more]
D8LP44_ECTSI	1.020e-16	32.14	EsV-1-1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
A0A8C5CXW1_GADMO	2.460e-8	41.25	Palmitoyltransferase n=3 Tax=Gadus morhua TaxID=80...	[more]
A0A668ADK2_9TELE	2.520e-7	40.00	Palmitoyltransferase n=4 Tax=Myripristis murdjan T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	SMART	SM00248	ANK_2a	coord: 57..86 e-value: 3.7E-4 score: 29.8 coord: 24..53 e-value: 2.8 score: 16.9 coord: 155..184 e-value: 170.0 score: 10.8 coord: 90..119 e-value: 0.45 score: 19.6 coord: 123..152 e-value: 0.0071 score: 25.5
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 24..56 score: 11.327
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 57..89 score: 11.808
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 123..149 score: 9.805
IPR002110	Ankyrin repeat	PROSITE	PS50088	ANK_REPEAT	coord: 93..122 score: 9.431
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 2..96 e-value: 8.8E-20 score: 72.6
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 97..213 e-value: 4.6E-25 score: 90.2
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 16..213
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 8..86 e-value: 2.3E-9 score: 37.7 coord: 95..182 e-value: 3.4E-13 score: 50.0
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 24..213 score: 43.184
None	No IPR available	PANTHER	PTHR24180	FAMILY NOT NAMED	coord: 25..119 coord: 93..212

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig79	contig	C-linearis_contig79:287887..288525 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig79.15401.1	mRNA_C-linearis_contig79.15401.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig79 287885..288525 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig79.15401.1 ID=prot_C-linearis_contig79.15401.1|Name=mRNA_C-linearis_contig79.15401.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=213bp
LSKASGSVERAIATTDINRGCGDTNQTPLMVASVIGSSRVVRDLLRQGAS
VSVADSDGYTTLHYSVYHKHLAVSKYLIEAGADLEARPGGIDTPLHVAAT
KGFCQGMVVLLDAGANVDSRLDDGATPLFEAASGGRLEAVRVLLRANANP
LLSAYGSLPLYMAVYNGHLKVVRELVYWYGTDRCTSDGGALALATAASRK
QVEIVTFLCDAGV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR036770	Ankyrin_rpt-contain_sf
IPR020683	Ankyrin_rpt-contain_dom