prot_C-linearis_contig78.15375.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig78.15375.1
Unique Name	prot_C-linearis_contig78.15375.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	151

Homology

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BLAST of mRNA_C-linearis_contig78.15375.1 vs. uniprot
Match: A0A6H5L3B4_9PHAE (NADAR domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3B4_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 6.570e-54
Identity = 92/153 (60.13%), Postives = 112/153 (73.20%), Query Frame = 0

Query:    1 DDVVLFWKPPSCFSNGTPSSFTVLGVLYTCGEQYMMSENARFSNDSSICSQTMATSRPQDHQALGRRDHNFDHAEWERRREVFVLTGTYAKFAQNSLLRQHLSSTGDRTLAEASPIAHLWGIGLAACHPDAAFPACWA--GRNLLGKALIEVR 151
            DDV+LFWKPPS FS  TPS+F VLGV Y+CGEQ+MMSE A+   D +   + MA + P+ H+ LGR    FD+AEWERRRE  VLTG+YAKFAQN  ++ HL  TG R LAEASP    WGIG++AC PDA+  + WA  G+NLLGKAL+EVR
Sbjct:   76 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDLTSYDKIMAATDPKTHKFLGRNVRPFDYAEWERRREEIVLTGSYAKFAQNHDMKHHLLETGTRLLAEASPFDRFWGIGMSACFPDASVSSKWAASGKNLLGKALMEVR 228

[Close]

BLAST of mRNA_C-linearis_contig78.15375.1 vs. uniprot
Match: A0A6H5JIZ7_9PHAE (NADAR domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIZ7_9PHAE)

HSP 1 Score: 178 bits (451), Expect = 8.170e-53
Identity = 90/153 (58.82%), Postives = 110/153 (71.90%), Query Frame = 0

Query:    1 DDVVLFWKPPSCFSNGTPSSFTVLGVLYTCGEQYMMSENARFSNDSSICSQTMATSRPQDHQALGRRDHNFDHAEWERRREVFVLTGTYAKFAQNSLLRQHLSSTGDRTLAEASPIAHLWGIGLAACHPDAAFPACWA--GRNLLGKALIEVR 151
            DDV+LFWKPPS  S  TPS F VLGV Y+CGEQYMMSE A+   D +   + MA   P+ H+ LGR    FD+AEWERRRE  VLTG+YAKFAQN  ++ HL  TG R LAE+SP   +WGIG++AC P+A+  + WA  G+NLLGKAL+EVR
Sbjct:   76 DDVLLFWKPPSVSSQWTPSVFNVLGVRYSCGEQYMMSEKAKLFGDMTSYDKIMAAPDPKTHKFLGRNVRPFDYAEWERRREEIVLTGSYAKFAQNHDMKHHLLETGTRLLAESSPFDRVWGIGMSACFPEASVSSKWAASGKNLLGKALMEVR 228

[Close]

BLAST of mRNA_C-linearis_contig78.15375.1 vs. uniprot
Match: A0A6H5JDD1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDD1_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 7.750e-52
Identity = 92/153 (60.13%), Postives = 113/153 (73.86%), Query Frame = 0

Query:    1 DDVVLFWKPPSCFSNGTPSSFTVLGVLYTCGEQYMMSENARFSNDSSICSQTMATSRPQDHQALGRRDHNFDHAEWERRREVFVLTGTYAKFAQNSLLRQHLSSTGDRTLAEASPIAHLWGIGLAACHPDAAFPACWA--GRNLLGKALIEVR 151
            DDV+LFWKPPS FS  TPS+F VLGV Y+CGEQ+MMSE A+   D +   + MA + P+ H+ LGR    FD+AEWERRRE  VLTG+YAKFAQN  ++ HL  TG R LAEASP   +WGIG++AC PDA+  + WA  G+NLLGKAL+EVR
Sbjct:   76 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGRNVRPFDYAEWERRREEIVLTGSYAKFAQNHDMKHHLLETGTRLLAEASPFDRVWGIGMSACFPDASDSSKWAASGKNLLGKALMEVR 228

[Close]

BLAST of mRNA_C-linearis_contig78.15375.1 vs. uniprot
Match: A0A6H5K8W4_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8W4_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 1.110e-50
Identity = 92/153 (60.13%), Postives = 113/153 (73.86%), Query Frame = 0

Query:    1 DDVVLFWKPPSCFSNGTPSSFTVLGVLYTCGEQYMMSENARFSNDSSICSQTMATSRPQDHQALGRRDHNFDHAEWERRREVFVLTGTYAKFAQNSLLRQHLSSTGDRTLAEASPIAHLWGIGLAACHPDAAFPACWA--GRNLLGKALIEVR 151
            DDV+LFWKPPS FS  TPS+F VLGV Y+CGEQ+MMSE A+   D +   + MA + P+ H+ LGR    FD+AEWERRRE  VLTG+YAKFAQN  ++ HL  TG R LAEASP   +WGIG++AC PDA+  + WA  G+NLLGKAL+EVR
Sbjct:  593 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGRNVRPFDYAEWERRREEIVLTGSYAKFAQNHDMKHHLLETGTRLLAEASPFDRVWGIGMSACFPDASDSSKWAASGKNLLGKALMEVR 745

[Close]

BLAST of mRNA_C-linearis_contig78.15375.1 vs. uniprot
Match: A0A6H5JVW3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVW3_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 1.170e-50
Identity = 92/153 (60.13%), Postives = 113/153 (73.86%), Query Frame = 0

Query:    1 DDVVLFWKPPSCFSNGTPSSFTVLGVLYTCGEQYMMSENARFSNDSSICSQTMATSRPQDHQALGRRDHNFDHAEWERRREVFVLTGTYAKFAQNSLLRQHLSSTGDRTLAEASPIAHLWGIGLAACHPDAAFPACWA--GRNLLGKALIEVR 151
            DDV+LFWKPPS FS  TPS+F VLGV Y+CGEQ+MMSE A+   D +   + MA + P+ H+ LGR    FD+AEWERRRE  VLTG+YAKFAQN  ++ HL  TG R LAEASP   +WGIG++AC PDA+  + WA  G+NLLGKAL+EVR
Sbjct:   76 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGRNVRPFDYAEWERRREEIVLTGSYAKFAQNHDMKHHLLETGTRLLAEASPFDRVWGIGMSACFPDASDSSKWAASGKNLLGKALMEVR 228

[Close]

BLAST of mRNA_C-linearis_contig78.15375.1 vs. uniprot
Match: A0A6H5J9B4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9B4_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 2.990e-50
Identity = 91/153 (59.48%), Postives = 111/153 (72.55%), Query Frame = 0

Query:    1 DDVVLFWKPPSCFSNGTPSSFTVLGVLYTCGEQYMMSENARFSNDSSICSQTMATSRPQDHQALGRRDHNFDHAEWERRREVFVLTGTYAKFAQNSLLRQHLSSTGDRTLAEASPIAHLWGIGLAACHPDAAFPACWA--GRNLLGKALIEVR 151
            DDV+LFWKPPS FS  TPS+F VLGV Y+CGEQ+MMSE A+   D +   + MA + P+ H+ LGR    FD+AEWERRRE  VLTG+YAKFAQN  ++ HL  TG R LAEASP    WGIG++AC PDA+  + WA  G+NLLG AL+EVR
Sbjct: 1033 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGRNVRPFDYAEWERRREEIVLTGSYAKFAQNHYMKHHLLETGTRLLAEASPFDRFWGIGMSACFPDASDSSKWAASGKNLLGNALMEVR 1185

[Close]

BLAST of mRNA_C-linearis_contig78.15375.1 vs. uniprot
Match: A0A6H5KMH8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMH8_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 4.000e-50
Identity = 92/153 (60.13%), Postives = 112/153 (73.20%), Query Frame = 0

Query:    1 DDVVLFWKPPSCFSNGTPSSFTVLGVLYTCGEQYMMSENARFSNDSSICSQTMATSRPQDHQALGRRDHNFDHAEWERRREVFVLTGTYAKFAQNSLLRQHLSSTGDRTLAEASPIAHLWGIGLAACHPDAAFPACWA--GRNLLGKALIEVR 151
            DDV+LFWKPPS FS  TPS+F VLGV Y+CGEQYMMSENA+   D +   + MA + P+ H+ LGR    FD+AEWERRRE  VLTG  AKFAQN  ++ HL  TG R LAEASP   +WGIG++AC PDA+  + WA  G++LLGKAL+EVR
Sbjct:  251 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQYMMSENAKLFGDMTSYEKIMAATDPKTHKFLGRNVRPFDYAEWERRREEIVLTGLCAKFAQNHDMKHHLLETGTRLLAEASPFDRVWGIGMSACFPDASVSSKWAASGKSLLGKALMEVR 403

[Close]

BLAST of mRNA_C-linearis_contig78.15375.1 vs. uniprot
Match: A0A6H5KWH8_9PHAE (NADAR domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWH8_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 4.310e-50
Identity = 86/149 (57.72%), Postives = 109/149 (73.15%), Query Frame = 0

Query:    5 LFWKPPSCFSNGTPSSFTVLGVLYTCGEQYMMSENARFSNDSSICSQTMATSRPQDHQALGRRDHNFDHAEWERRREVFVLTGTYAKFAQNSLLRQHLSSTGDRTLAEASPIAHLWGIGLAACHPDAAFPACW--AGRNLLGKALIEVR 151
            LFWKPPS FS  TPS+F VLGV Y+CGEQ+MMSE A+   D +   + M  + P+ ++ LGR+   FD+AEWERRRE  VLTG+YAKFAQN  ++QHL +TG R LAEASP   +WGIG+AA  P+A+  + W  +GRNLLGK L+EVR
Sbjct:    5 LFWKPPSGFSQWTPSAFDVLGVRYSCGEQFMMSEKAKLFGDMASYDKIMTATDPKTYKYLGRKVRPFDYAEWERRREEIVLTGSYAKFAQNPAMKQHLMATGTRFLAEASPFDPVWGIGMAATSPEASDSSNWPNSGRNLLGKVLMEVR 153

[Close]

BLAST of mRNA_C-linearis_contig78.15375.1 vs. uniprot
Match: A0A6H5K020_9PHAE (NADAR domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K020_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 5.480e-50
Identity = 91/153 (59.48%), Postives = 112/153 (73.20%), Query Frame = 0

Query:    1 DDVVLFWKPPSCFSNGTPSSFTVLGVLYTCGEQYMMSENARFSNDSSICSQTMATSRPQDHQALGRRDHNFDHAEWERRREVFVLTGTYAKFAQNSLLRQHLSSTGDRTLAEASPIAHLWGIGLAACHPDAAFPACWA--GRNLLGKALIEVR 151
            DDV+LFWKPPS FS  TPS+F VLGV Y+CGE +MMSE A+   D +   + MA + P+ H+ LGR    FD+AEWERRRE  VLTG+YAKFAQN  ++ HL  TG R LAEASP   +WGIG++AC PDA+  + WA  G+NLLGKAL+EVR
Sbjct:  760 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEHFMMSEKAKLFGDMTSYDKIMAATDPKIHKFLGRNVRPFDYAEWERRREEIVLTGSYAKFAQNHDMKHHLLETGTRLLAEASPFDRVWGIGMSACFPDASVSSKWAASGKNLLGKALMEVR 912

[Close]

BLAST of mRNA_C-linearis_contig78.15375.1 vs. uniprot
Match: A0A6H5JGS1_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGS1_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 7.540e-50
Identity = 92/153 (60.13%), Postives = 112/153 (73.20%), Query Frame = 0

Query:    1 DDVVLFWKPPSCFSNGTPSSFTVLGVLYTCGEQYMMSENARFSNDSSICSQTMATSRPQDHQALGRRDHNFDHAEWERRREVFVLTGTYAKFAQNSLLRQHLSSTGDRTLAEASPIAHLWGIGLAACHPDAAFPACWA--GRNLLGKALIEVR 151
            DDV+LFWKPPS FS  TPS+F VLGV Y+CGEQ MMSE A+   D +   + MA + P+ H+ LGR    FD+AEWERRRE  VLTG+YAKFAQN  ++ HL  TG R LAEASP   +WGIG++AC PDA+  + WA  G+NLLGKAL+EVR
Sbjct:  345 DDVLLFWKPPSVFSQWTPSAFDVLGVRYSCGEQLMMSEKAKLFGDMTSYDKIMAATDPKTHKFLGRNVRPFDYAEWERRREEIVLTGSYAKFAQNHDMKHHLLETGTRLLAEASPFDRVWGIGMSACCPDASDSSKWAASGKNLLGKALMEVR 497

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig78.15375.1 vs. uniprot

BLAST of mRNA_C-linearis_contig78.15375.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L3B4_9PHAE	6.570e-54	60.13	NADAR domain-containing protein (Fragment) n=1 Tax...	[more]
A0A6H5JIZ7_9PHAE	8.170e-53	58.82	NADAR domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5JDD1_9PHAE	7.750e-52	60.13	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K8W4_9PHAE	1.110e-50	60.13	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5JVW3_9PHAE	1.170e-50	60.13	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5J9B4_9PHAE	2.990e-50	59.48	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KMH8_9PHAE	4.000e-50	60.13	Integrase catalytic domain-containing protein n=1 ...	[more]
A0A6H5KWH8_9PHAE	4.310e-50	57.72	NADAR domain-containing protein (Fragment) n=1 Tax...	[more]
A0A6H5K020_9PHAE	5.480e-50	59.48	NADAR domain-containing protein (Fragment) n=1 Tax...	[more]
A0A6H5JGS1_9PHAE	7.540e-50	60.13	Reverse transcriptase domain-containing protein n=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012816	NADAR	PFAM	PF08719	DUF1768	coord: 6..151 e-value: 1.1E-35 score: 123.3
IPR012816	NADAR	TIGRFAM	TIGR02464	TIGR02464	coord: 5..151 e-value: 1.7E-34 score: 117.3
IPR037238	YbiA-like superfamily	GENE3D	1.10.357.40		coord: 2..151 e-value: 3.1E-28 score: 100.3
IPR037238	YbiA-like superfamily	SUPERFAMILY	143990	YbiA-like	coord: 2..151

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig78	contig	C-linearis_contig78:781683..782135 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig78.15375.1	mRNA_C-linearis_contig78.15375.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig78 781683..782135 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig78.15375.1 ID=prot_C-linearis_contig78.15375.1|Name=mRNA_C-linearis_contig78.15375.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=151bp
DDVVLFWKPPSCFSNGTPSSFTVLGVLYTCGEQYMMSENARFSNDSSICS
QTMATSRPQDHQALGRRDHNFDHAEWERRREVFVLTGTYAKFAQNSLLRQ
HLSSTGDRTLAEASPIAHLWGIGLAACHPDAAFPACWAGRNLLGKALIEV
R

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012816	NADAR
IPR037238	YbiA-like_sf