prot_C-linearis_contig78.15372.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig78.15372.1
Unique Nameprot_C-linearis_contig78.15372.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length353
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig78.15372.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008615FNIPPFAMPF05725FNIPcoord: 129..162
e-value: 5.0E-6
score: 26.6
coord: 175..217
e-value: 4.5E-7
score: 29.9
coord: 219..262
e-value: 9.4E-9
score: 35.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 111..351
e-value: 2.3E-5
score: 25.0
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 119..341
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 130..324

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig78contigC-linearis_contig78:704481..705539 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig78.15372.1mRNA_C-linearis_contig78.15372.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig78 703731..707911 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig78.15372.1 ID=prot_C-linearis_contig78.15372.1|Name=mRNA_C-linearis_contig78.15372.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=353bp
MGHAVRKNGNTPMAQLELVSLEFCDTVRARSSKRLKVERATPKYLWMDGE
MGPASLGSVATRVLACRPREVTWQLPARRLNHGVDVFATVEGFSFGDLSI
DKVDHVVWTRGLKRFFLGKRFNCSVDAVPFPASLQELHFGPYFNQPIRRT
NWPRSLQKLTFPTCSRPHGNYPHGFNQPVTEVVWPSSIEMISLGMNFNQP
IAAVLWPPSLQTIFFGGCFNQPIIGVEWPPSLRNLSFGWHFNQPIIGVAW
PASLRQLSFGEKFDQPVSGVAWPDSLTQLSFGQCFNQPMTGVVWSSSLRQ
LEFGADFWQVVVGIAWPASLKSLTVVRAGKKTACQPNATLPARVSLNNLR
SY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008615FNIP
IPR032675LRR_dom_sf