prot_C-linearis_contig78.15370.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig78.15370.1
Unique Nameprot_C-linearis_contig78.15370.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length922
Homology
BLAST of mRNA_C-linearis_contig78.15370.1 vs. uniprot
Match: A0A6H5KKK5_9PHAE (DUF4211 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK5_9PHAE)

HSP 1 Score: 546 bits (1406), Expect = 2.640e-176
Identity = 276/354 (77.97%), Postives = 296/354 (83.62%), Query Frame = 0
Query:  570 GDACFSHAALFQEMEATQDGGVSSLSMGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPENARYGKAREMVEKKLRISGESMCGTWRQDFRDNIMRYPYYGYLSVHGHECQIADRCSACNRSNRTSVIAFLSGAEYEPNRVWDGLRWVNHLPKHWDNPAAMATSKQATKATHFLGDTCKHKSHLFHSLTHYKLYLVSKVAAKINGDDELEPENFRGEGA-QTSKKKKKRCLNFSENEFESLSSLLNKADDLNGVKWGGRVGVRGGHGKTLLQAGAASSILDWLSGEAPPEQYGELDLG-LEGAAGGAEGLGEDAREDTDNGDDEEEFHVGRGRRWRTVGSSGGRYG 921
            GDA FSHAA F EME ++DGGVSSLS+GTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPE+ARYGKA+EMVEKKLRISGES+CG+WRQDFRD IMRYP+YGY  V G  C++ DRCSACNRSNRTSVIAFLSG+EY+PNRVWDGLRW  HLP+HWD+P A A +KQ  KATH+LGDTCKHKSHLFHSLTHYKLYLVSKV+AKI GD  LEPENFRGEG  QTSKK+KKRCLNFSENEFESLS+LL KADDLNGVKWGGR GVRGGHGKT L+ GAASSILDWLSGEA   QYG LDLG LEG                   D      VGRGRRWRTVGSS GRYG
Sbjct:  630 GDAFFSHAAFFNEMEQSEDGGVSSLSVGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLCRLNDRCSACNRSNRTSVIAFLSGSEYDPNRVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGPQTSKKEKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGGLDLGELEGQGPXXXXXXXXXXXXXXXXD------VGRGRRWRTVGSSSGRYG 977          
BLAST of mRNA_C-linearis_contig78.15370.1 vs. uniprot
Match: D7G8T8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T8_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 2.010e-93
Identity = 165/253 (65.22%), Postives = 179/253 (70.75%), Query Frame = 0
Query:  671 IMRYPYYGYLSVHGHECQIADRCSACNRSNRTSVIAFLSGAEYEPNRVWDGLRWVNHLPKHWDNPAAMATSKQATKATHFLGDTCKHKSHLFHSLTHYKLYLVSKVAAKINGDDELEPENFRGEGA-QTSKKKKKRCLNFSENEFESLSSLLNKADDLNGVKWGGRVGVRGGHGKTLLQAGAASSILDWLSGEAPPEQYGELDLG-LEGAAGGAEGLGEDAREDTDNGDDEEEFHVGRGRRWRTVGSSGGRYG 921
            I+ Y   G +      C I   C  C+R     ++ F         +VWDGLRW  HLP+HWD+P A A +KQ  KATH+LGDTCKHKSHLFHSLTHYKLYLVSKV+AKI GD  LEPENFRGEG   TSKKKKKRCLNFSENEFESLS+LL KADDLNGVKWGGR GVRGGHGKT L+ GAASSILDWLSGEA   QYG+LDLG LEG   G   LG               FHVGRGRRWRTVGSSGGRYG
Sbjct:   21 ILNYVLTGLVQKLERACLIRSVCLCCSRLT-CPLLPF--------RKVWDGLRWDKHLPEHWDDPDAAAVAKQEAKATHYLGDTCKHKSHLFHSLTHYKLYLVSKVSAKIRGDSGLEPENFRGEGGPHTSKKKKKRCLNFSENEFESLSALLRKADDLNGVKWGGRAGVRGGHGKTFLEMGAASSILDWLSGEAQQGQYGDLDLGDLEGQRAG---LGXXXXXXXXXXX----FHVGRGRRWRTVGSSGGRYG 257          
BLAST of mRNA_C-linearis_contig78.15370.1 vs. uniprot
Match: D7G8T9_ECTSI (DUF4211 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8T9_ECTSI)

HSP 1 Score: 263 bits (671), Expect = 1.370e-71
Identity = 124/148 (83.78%), Postives = 137/148 (92.57%), Query Frame = 0
Query:  571 DACFSHAALFQEMEATQDGGVSSLSMGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPENARYGKAREMVEKKLRISGESMCGTWRQDFRDNIMRYPYYGYLSVHGHECQIADRCSACNRSNRTSVIAFLSGAEYEPNRV 718
            DA FSHAA F EME ++DGG+SSLS+GTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPE+ARYGKA+EMVEKKLRISGES+CG+WRQDFRD IMRYP+YGY  V G  C++ DRCSACNRSNRTSVIAFLSG+EY+PNRV
Sbjct:  659 DAFFSHAAFFNEMEQSEDGGISSLSVGTMTFKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPEHARYGKAKEMVEKKLRISGESLCGSWRQDFRDTIMRYPHYGYHHVDGDLCRLTDRCSACNRSNRTSVIAFLSGSEYDPNRV 806          
BLAST of mRNA_C-linearis_contig78.15370.1 vs. uniprot
Match: D7FLB0_ECTSI (RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB0_ECTSI)

HSP 1 Score: 78.2 bits (191), Expect = 6.530e-11
Identity = 65/212 (30.66%), Postives = 101/212 (47.64%), Query Frame = 0
Query:  608 YVEYIAKATQGDGAGEAFMKKYVAQPRIPENARYGKAREMVEKKLRISGESMC--GTWRQDFRDNIMRYPYYGYLSVHGHE--CQIADR----------------CSACNRSNRTSVIA-FLSGAEYEPNRVWDGLRWVNHLPKHWDNPAAMATSKQATKATHFLGDTCKHKSHLFHSLTHYKLYLVSKVAAKINGDDELEPENFR-GEGAQ 797
            Y+E++AKA QG G G AFM+K+ ++     +  Y KA +  E ++    ES+   G+W Q+F   +  YP+ G+     HE   +I D                 C+AC+R  R ++   +L+G+         G +                 SKQ  +    LG  C++KSHL+H+L HYKLYLV KV   ++    + PE+ R GE A+
Sbjct:  940 YLEFLAKAVQGGGKGAAFMEKFDSKRHAFTD--YRKAIKNFEGRVCTIRESIAAGGSWNQEFMTAVTSYPFVGFHFGVSHEGPTEIDDEEEGQDIDWESLGRPDPCAACHRRQRENMSTMYLAGSR-------GGYK-----------------SKQKVRERLGLGGRCRYKSHLYHTLLHYKLYLVCKVREHMDTTG-VGPEDLRKGEWAE 1124          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig78.15370.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KKK5_9PHAE2.640e-17677.97DUF4211 domain-containing protein n=1 Tax=Ectocarp... [more]
D7G8T8_ECTSI2.010e-9365.22Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G8T9_ECTSI1.370e-7183.78DUF4211 domain-containing protein n=1 Tax=Ectocarp... [more]
D7FLB0_ECTSI6.530e-1130.66RNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 312..332
NoneNo IPR availableCOILSCoilCoilcoord: 485..521
IPR025451Domain of unknown function DUF4211PFAMPF13926DUF4211coord: 566..716
e-value: 5.9E-9
score: 36.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig78contigC-linearis_contig78:684040..695160 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig78.15370.1mRNA_C-linearis_contig78.15370.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig78 683577..695160 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig78.15370.1 ID=prot_C-linearis_contig78.15370.1|Name=mRNA_C-linearis_contig78.15370.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=922bp
MSAARRRRVLLESDDEDEKVSRQLAVMPKESPPAEQPRPKKSYNKGKIIS
GVDEEEDDEEEGEGGGEGGTGKIGGSEVKRQNCVFSAGRGDEDQDEMEWK
RRRQLAERWTQLEEDSDHDLSDGAGGGGSGKKRSTLVQLRVQDSWKRSTP
SRKSSRLFAKEKPPSEDEIGDSSDSDDDFDDFIIADDDDDDDDDNLQGEG
GNGDYNGDRKKKKKKKKKGGASKKGKTEGTKEGDKKKLSASGKSGGDAAT
VPKSGRRGGGEIEDSSSEDSDDDDDEEDNITVLRSSGRRGGGSAGAPAAA
AAVSKKRRGKGASQAGEEGDEEEEEEEEEEERPGRRKRARRSERSRKATI
DLSSDKDQQEDEELEEEAPAKVTGGAGKGKDKGKTKKGKGKGKKGRKKNK
RNEQQEEEEEEPAAAVATAKRTSRPRRKSSMVNYRDMLRTDGVSSSEDEA
SDSGDGAVVGGGSHGGGAGRKCGGDEDADADDNFAENLKDDDEEDENDEE
EEEEEEEVEKTKKKRAGATKRRSSGNWNRYGVSFWLTLCGKCDFARVSDD
DDDDDDNDGVVDDDEDDDEGDACFSHAALFQEMEATQDGGVSSLSMGTMT
FKEAFLFYVEYIAKATQGDGAGEAFMKKYVAQPRIPENARYGKAREMVEK
KLRISGESMCGTWRQDFRDNIMRYPYYGYLSVHGHECQIADRCSACNRSN
RTSVIAFLSGAEYEPNRVWDGLRWVNHLPKHWDNPAAMATSKQATKATHF
LGDTCKHKSHLFHSLTHYKLYLVSKVAAKINGDDELEPENFRGEGAQTSK
KKKKRCLNFSENEFESLSSLLNKADDLNGVKWGGRVGVRGGHGKTLLQAG
AASSILDWLSGEAPPEQYGELDLGLEGAAGGAEGLGEDAREDTDNGDDEE
EFHVGRGRRWRTVGSSGGRYG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025451DUF4211