prot_C-linearis_contig78.15364.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig78.15364.1
Unique Name	prot_C-linearis_contig78.15364.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	185

Homology

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BLAST of mRNA_C-linearis_contig78.15364.1 vs. uniprot
Match: A0A6H5K7Z6_9PHAE (DUF4440 domain-containing protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7Z6_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 5.990e-57
Identity = 87/157 (55.41%), Postives = 114/157 (72.61%), Query Frame = 0

Query:   28 VRANMTQAGARSFFSSGPSADEKAINKAVENWRDTLTSGADDAPTKVAALYAPDALFWGTVSEQLRTTPQHVLEYFEYFARSPKLTMTRLNPGKVQMHGDIGIQAGDYTFTWVGADGPV-EVDARFTFHFRREADGWKIVEHHSSAMPTAPPALKPA 183
            V+  + Q   ++ +++  ++D+KA++ A  NWRDT+TS  +DAP K AA+YA DALFWGTVSEQ+R TP+HV +YF++FAR PKL+M   +P   ++HGD  I AG YTF W GADG + E  ARFTF +RRE   W +VEHHSSAMP APP LKPA
Sbjct:   59 VKLPVRQMSGQADYAANYTSDQKAVDAATRNWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEQVRNTPEHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVMVEHHSSAMPKAPPGLKPA 215

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BLAST of mRNA_C-linearis_contig78.15364.1 vs. uniprot
Match: A0A6H5K6U8_9PHAE (DUF4440 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6U8_9PHAE)

HSP 1 Score: 182 bits (462), Expect = 7.210e-56
Identity = 82/144 (56.94%), Postives = 108/144 (75.00%), Query Frame = 0

Query:   41 FSSGPSADEKAINKAVENWRDTLTSGADDAPTKVAALYAPDALFWGTVSEQLRTTPQHVLEYFEYFARSPKLTMTRLNPGKVQMHGDIGIQAGDYTFTWVGADGPV-EVDARFTFHFRREADGWKIVEHHSSAMPTAPPALKPA 183
            +++  +AD+KA++ A  +WRDT+TS  +DAP K AA+YA DALFWGTVSE++R TP+HV +YF++FAR PKL+M   +P   ++HGD  + AG YTF W GADG + E  ARFTF +RRE   W ++EHHSSAMP APP LKPA
Sbjct:    7 YAANYTADQKAVDAATRHWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEEVRNTPEHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAVHAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVMIEHHSSAMPKAPPGLKPA 150

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BLAST of mRNA_C-linearis_contig78.15364.1 vs. uniprot
Match: A0A6H5JT29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT29_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 1.050e-42
Identity = 80/162 (49.38%), Postives = 102/162 (62.96%), Query Frame = 0

Query:   40 FFSSGPSAD--------------EKAINKAVENWRDTLTSGADDAPTKVAALYAPDALFWGTVSEQLRTTPQHVLEYFEYFARSPKLTMTRLNPGKVQMHGDIGIQAGDYTFTWVGADGP-VEVDARFTFHFRREADG----WKIVEHHSSAMPTAPPALKP 182
            FF  GP+AD              +KA+      W+DT+T G DDAP K AALYAPDA+ WGTVSE++R TP+ + +YF++FAR PKL +    P  V+++G+  ++AG YTF W G DG  VE  ARF+F FRR   G    W IVEHHSS+MP AP  LKP
Sbjct:  271 FFKVGPNADLVKVTPKKVEITPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRVVEYTPAPVRVYGEFAVEAGTYTFAWQGEDGKTVEKRARFSFTFRRGKPGSPQPWTIVEHHSSSMPIAPAELKP 432

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BLAST of mRNA_C-linearis_contig78.15364.1 vs. uniprot
Match: A0A6H5JX02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX02_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 1.240e-41
Identity = 76/142 (53.52%), Postives = 95/142 (66.90%), Query Frame = 0

Query:   45 PSADEKAINKAVENWRDTLTSGADDAPTKVAALYAPDALFWGTVSEQLRTTPQHVLEYFEYFARSPKLTMTRLNPGKVQMHGDIGIQAGDYTFTWVGADGP-VEVDARFTFHFRREADG----WKIVEHHSSAMPTAPPALK 181
            P  D +A+ +    W+DT+TSG  DAP K AALYAPD   WGTVSE++R TPQ +  YF+YFAR P+L +    P  V+++GD  +QAG YTF+W   DG  VE  ARF+F FRR+  G    W IVEHHSS+MPTAP  LK
Sbjct:   24 PKLDRRAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGTVSEEVRDTPQQIYAYFDYFARLPELKVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGTIVEKRARFSFTFRRDNPGTDRPWTIVEHHSSSMPTAPAGLK 165

[Close]

BLAST of mRNA_C-linearis_contig78.15364.1 vs. uniprot
Match: A0A6H5K0Z5_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z5_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 1.640e-41
Identity = 75/139 (53.96%), Postives = 96/139 (69.06%), Query Frame = 0

Query:   48 DEKAINKAVENWRDTLTSGADDAPTKVAALYAPDALFWGTVSEQLRTTPQHVLEYFEYFARSPKLTMTRLNPGKVQMHGDIGIQAGDYTFTWVGADGP-VEVDARFTFHFRREADG----WKIVEHHSSAMPTAPPALK 181
            D+KA+ +    W+DT+T G DDAP K AALYAPDA+ WGTVSE++R TP+ + +YF++FAR PKL +    P  V+++G+  +QAG YTF W G DG  VE  ARF+F FRR   G    W IVEHHSS+MP AP  LK
Sbjct:  322 DQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGEFAVQAGTYTFAWEGDDGDTVEKRARFSFTFRRGKPGSPRPWTIVEHHSSSMPDAPAELK 460

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BLAST of mRNA_C-linearis_contig78.15364.1 vs. uniprot
Match: D7FUF8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF8_ECTSI)

HSP 1 Score: 155 bits (391), Expect = 5.020e-41
Identity = 74/140 (52.86%), Postives = 95/140 (67.86%), Query Frame = 0

Query:   48 DEKAINKAVENWRDTLTSGADDAPTKVAALYAPDALFWGTVSEQLRTTPQHVLEYFEYFARSPKLTMTRLNPGKVQMHGDIGIQAGDYTFTWVGADGP-VEVDARFTFHFRREADG----WKIVEHHSSAMPTAPPALKP 182
            D+KA+      W+DT+T G DDAP K AALYA DA+ WGTVSE++R TP+ + +YF++FAR PKL +    P  V+++G   ++AG YTF W G DG  VE  ARF+F FRR+  G    W IVEHHSS+MP AP  LKP
Sbjct:  287 DQKAVAATTIVWKDTVTLGTDDAPKKTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKP 426

[Close]

BLAST of mRNA_C-linearis_contig78.15364.1 vs. uniprot
Match: D7FUF9_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF9_ECTSI)

HSP 1 Score: 154 bits (388), Expect = 2.490e-40
Identity = 75/139 (53.96%), Postives = 94/139 (67.63%), Query Frame = 0

Query:   48 DEKAINKAVENWRDTLTSGADDAPTKVAALYAPDALFWGTVSEQLRTTPQHVLEYFEYFARSPKLTMTRLNPGKVQMHGDIGIQAGDYTFTWVGADGP-VEVDARFTFHFRREADG----WKIVEHHSSAMPTAPPALK 181
            D +A+ +    W+DT+TSG  DAP K AALYAPD   WGTVSE++R TPQ +  YF+YFAR P+L +    P  V+++GD  +QAG YTF+W   DG  VE  ARF+F FRR+  G    W IVEHHSS+MPTAP  LK
Sbjct:  172 DRRAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGTVSEEVRDTPQQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGAIVEKRARFSFTFRRDNPGTERPWTIVEHHSSSMPTAPAGLK 310

[Close]

BLAST of mRNA_C-linearis_contig78.15364.1 vs. uniprot
Match: A0A6H5JSB2_9PHAE (DUF4440 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSB2_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 6.460e-38
Identity = 65/138 (47.10%), Postives = 89/138 (64.49%), Query Frame = 0

Query:   48 DEKAINKAVENWRDTLTSGADDAPTKVAALYAPDALFWGTVSEQLRTTPQHVLEYFEYFARSPKLTMTRLNPGKVQMHGDIGIQAGDYTFTWVGADG-PVEVDARFTFHFRREADG---WKIVEHHSSAMPTAPPALK 181
            D K + +    W++ +T G  DAP K A LYA D + WGTVSE++R TP+ + +YF+YFAR P L ++   P  ++++GD   +AG YTF W G DG P E  ARF+F FR + +    W IVEHHSS+MPT+P  LK
Sbjct:  103 DRKGVEQTTIRWKEMVTLGTPDAPRKTADLYAVDGVLWGTVSEEVRDTPEEIYDYFDYFARLPNLRLSEFTPVSLRVYGDFATEAGTYTFKWQGEDGVPKEKRARFSFTFRSDPESPTSWTIVEHHSSSMPTSPLQLK 240

[Close]

BLAST of mRNA_C-linearis_contig78.15364.1 vs. uniprot
Match: A0A6H5LB09_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB09_9PHAE)

HSP 1 Score: 148 bits (373), Expect = 7.320e-38
Identity = 74/140 (52.86%), Postives = 94/140 (67.14%), Query Frame = 0

Query:   47 ADEKAINKAVENWRDTLTSGADDAPTKVAALYAPDALFWGTVSEQLRTTPQHVLEYFEYFARSPKLTMTRLNPGKVQMHGDIGIQAGDYTFTWVGADGP-VEVDARFTFHFRREADG----WKIVEHHSSAMPTAPPALK 181
            AD+ A+      W+DT+TSG  DAP K AALYA D + WGTVSE++R TP+ +  YF+YFAR P+L +    P  V+++GD  +QAG YTF + GADG  VE  ARF+F FRR+  G    W IVEHHSS+MP AP  LK
Sbjct: 1257 ADKAAVAATTIIWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGADGETVEKRARFSFTFRRDHPGSPTPWTIVEHHSSSMPNAPAGLK 1396

[Close]

BLAST of mRNA_C-linearis_contig78.15364.1 vs. uniprot
Match: D7FN21_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN21_ECTSI)

HSP 1 Score: 145 bits (365), Expect = 2.770e-37
Identity = 72/139 (51.80%), Postives = 92/139 (66.19%), Query Frame = 0

Query:   48 DEKAINKAVENWRDTLTSGADDAPTKVAALYAPDALFWGTVSEQLRTTPQHVLEYFEYFARSPKLTMTRLNPGKVQMHGDIGIQAGDYTFTWVGADGP-VEVDARFTFHFRRE----ADGWKIVEHHSSAMPTAPPALK 181
            D+ A+      W+DT+TSG  DAP K AALYA D + WGTVSE++R TP+ +  YF+YFAR P+L +    P  V+++GD  +QAG YTF + GADG  VE  ARF+F FRR+       W IVEHHSS+MP AP  LK
Sbjct:  133 DKAAVAATTVVWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRLVEYTPVAVRVYGDFAVQAGTYTFAFQGADGATVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPNAPAGLK 271

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig78.15364.1 vs. uniprot

BLAST of mRNA_C-linearis_contig78.15364.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5K7Z6_9PHAE	5.990e-57	55.41	DUF4440 domain-containing protein n=7 Tax=Ectocarp...	[more]
A0A6H5K6U8_9PHAE	7.210e-56	56.94	DUF4440 domain-containing protein n=1 Tax=Ectocarp...	[more]
A0A6H5JT29_9PHAE	1.050e-42	49.38	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JX02_9PHAE	1.240e-41	53.52	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K0Z5_9PHAE	1.640e-41	53.96	PDZ domain-containing protein n=2 Tax=Ectocarpus T...	[more]
D7FUF8_ECTSI	5.020e-41	52.86	Similar to Uncharacterized protein conserved in ba...	[more]
D7FUF9_ECTSI	2.490e-40	53.96	Similar to Uncharacterized protein conserved in ba...	[more]
A0A6H5JSB2_9PHAE	6.460e-38	47.10	DUF4440 domain-containing protein n=2 Tax=Ectocarp...	[more]
A0A6H5LB09_9PHAE	7.320e-38	52.86	Reverse transcriptase domain-containing protein n=...	[more]
D7FN21_ECTSI	2.770e-37	51.80	Similar to Uncharacterized protein conserved in ba...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027843	Domain of unknown function DUF4440	PFAM	PF14534	DUF4440	coord: 52..165 e-value: 5.1E-18 score: 65.4
None	No IPR available	GENE3D	3.10.450.50		coord: 40..184 e-value: 1.8E-37 score: 130.5
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..184
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 15..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 5..14
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..4
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..19 score: 0.488
IPR032710	NTF2-like domain superfamily	SUPERFAMILY	54427	NTF2-like	coord: 44..174

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig78	contig	C-linearis_contig78:504423..506762 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig78.15364.1	mRNA_C-linearis_contig78.15364.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig78 503144..508478 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig78.15364.1 ID=prot_C-linearis_contig78.15364.1|Name=mRNA_C-linearis_contig78.15364.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=185bp
MKKMFLFNLGCCVIDTCGCLDDEAFGGVRANMTQAGARSFFSSGPSADEK
AINKAVENWRDTLTSGADDAPTKVAALYAPDALFWGTVSEQLRTTPQHVL
EYFEYFARSPKLTMTRLNPGKVQMHGDIGIQAGDYTFTWVGADGPVEVDA
RFTFHFRREADGWKIVEHHSSAMPTAPPALKPAM*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027843	DUF4440
IPR032710	NTF2-like_dom_sf