mRNA_C-linearis_contig78.15364.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig78.15364.1
Unique NamemRNA_C-linearis_contig78.15364.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
[Close]
BLAST of mRNA_C-linearis_contig78.15364.1 vs. uniprot
Match: A0A6H5K7Z6_9PHAE (DUF4440 domain-containing protein n=7 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7Z6_9PHAE)

HSP 1 Score: 188 bits (478), Expect = 7.890e-51
Identity = 87/158 (55.06%), Postives = 114/158 (72.15%), Query Frame = 2 
Query: 1361 VRANMTQAGARSFFSSGPSADEKAINKAVENWRDTLTSGADDAPTKVAALYAPDALFWGTVSEQLRTTPQHVLEYFEYFARSPKLTMTRLNPGKVQMHGDIGIQAGDYTFTWVGADGPV-EVDARFTFHFRREADGWKIVEHHSSAMPTAPPALKPAM 1831
            V+  + Q   ++ +++  ++D+KA++ A  NWRDT+TS  +DAP K AA+YA DALFWGTVSEQ+R TP+HV +YF++FAR PKL+M   +P   ++HGD  I AG YTF W GADG + E  ARFTF +RRE   W +VEHHSSAMP APP LKPA 
Sbjct:   59 VKLPVRQMSGQADYAANYTSDQKAVDAATRNWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEQVRNTPEHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAIHAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVMVEHHSSAMPKAPPGLKPAQ 216
[Close]
BLAST of mRNA_C-linearis_contig78.15364.1 vs. uniprot
Match: A0A6H5K6U8_9PHAE (DUF4440 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6U8_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 5.710e-50
Identity = 82/145 (56.55%), Postives = 108/145 (74.48%), Query Frame = 2 
Query: 1400 FSSGPSADEKAINKAVENWRDTLTSGADDAPTKVAALYAPDALFWGTVSEQLRTTPQHVLEYFEYFARSPKLTMTRLNPGKVQMHGDIGIQAGDYTFTWVGADGPV-EVDARFTFHFRREADGWKIVEHHSSAMPTAPPALKPAM 1831
            +++  +AD+KA++ A  +WRDT+TS  +DAP K AA+YA DALFWGTVSE++R TP+HV +YF++FAR PKL+M   +P   ++HGD  + AG YTF W GADG + E  ARFTF +RRE   W ++EHHSSAMP APP LKPA 
Sbjct:    7 YAANYTADQKAVDAATRHWRDTVTSNTEDAPKKTAAIYADDALFWGTVSEEVRNTPEHVYDYFDFFARMPKLSMVAYDPAPPRIHGDFAVHAGAYTFAWAGADGAMTETRARFTFAYRRENGKWVMIEHHSSAMPKAPPGLKPAQ 151
[Close]
BLAST of mRNA_C-linearis_contig78.15364.1 vs. uniprot
Match: A0A6H5JT29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT29_9PHAE)

HSP 1 Score: 159 bits (402), Expect = 4.640e-38
Identity = 84/175 (48.00%), Postives = 107/175 (61.14%), Query Frame = 2 
Query: 1397 FFSSGPSAD--------------EKAINKAVENWRDTLTSGADDAPTKVAALYAPDALFWGTVSEQLRTTPQHVLEYFEYFARSPKLTMTRLNPGKVQMHGDIGIQAGDYTFTWVGADGP-VEVDARFTFHFRREADG----WKIVEHHSSAMPTAPPALKPAM*AFG---DAFG 1855
            FF  GP+AD              +KA+      W+DT+T G DDAP K AALYAPDA+ WGTVSE++R TP+ + +YF++FAR PKL +    P  V+++G+  ++AG YTF W G DG  VE  ARF+F FRR   G    W IVEHHSS+MP AP  LKP   A G   + FG
Sbjct:  271 FFKVGPNADLVKVTPKKVEITPDQKAVAATTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRVVEYTPAPVRVYGEFAVEAGTYTFAWQGEDGKTVEKRARFSFTFRRGKPGSPQPWTIVEHHSSSMPIAPAELKPVGVARGAWLETFG 445
[Close]
BLAST of mRNA_C-linearis_contig78.15364.1 vs. uniprot
Match: A0A6H5JX02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX02_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 1.180e-36
Identity = 76/142 (53.52%), Postives = 95/142 (66.90%), Query Frame = 2 
Query: 1412 PSADEKAINKAVENWRDTLTSGADDAPTKVAALYAPDALFWGTVSEQLRTTPQHVLEYFEYFARSPKLTMTRLNPGKVQMHGDIGIQAGDYTFTWVGADGP-VEVDARFTFHFRREADG----WKIVEHHSSAMPTAPPALK 1822
            P  D +A+ +    W+DT+TSG  DAP K AALYAPD   WGTVSE++R TPQ +  YF+YFAR P+L +    P  V+++GD  +QAG YTF+W   DG  VE  ARF+F FRR+  G    W IVEHHSS+MPTAP  LK
Sbjct:   24 PKLDRRAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGTVSEEVRDTPQQIYAYFDYFARLPELKVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGTIVEKRARFSFTFRRDNPGTDRPWTIVEHHSSSMPTAPAGLK 165
[Close]
BLAST of mRNA_C-linearis_contig78.15364.1 vs. uniprot
Match: A0A6H5K0Z5_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z5_9PHAE)

HSP 1 Score: 157 bits (397), Expect = 2.010e-36
Identity = 75/139 (53.96%), Postives = 96/139 (69.06%), Query Frame = 2 
Query: 1421 DEKAINKAVENWRDTLTSGADDAPTKVAALYAPDALFWGTVSEQLRTTPQHVLEYFEYFARSPKLTMTRLNPGKVQMHGDIGIQAGDYTFTWVGADGP-VEVDARFTFHFRREADG----WKIVEHHSSAMPTAPPALK 1822
            D+KA+ +    W+DT+T G DDAP K AALYAPDA+ WGTVSE++R TP+ + +YF++FAR PKL +    P  V+++G+  +QAG YTF W G DG  VE  ARF+F FRR   G    W IVEHHSS+MP AP  LK
Sbjct:  322 DQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGEFAVQAGTYTFAWEGDDGDTVEKRARFSFTFRRGKPGSPRPWTIVEHHSSSMPDAPAELK 460
[Close]
BLAST of mRNA_C-linearis_contig78.15364.1 vs. uniprot
Match: D7FUF8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF8_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 5.200e-36
Identity = 74/140 (52.86%), Postives = 95/140 (67.86%), Query Frame = 2 
Query: 1421 DEKAINKAVENWRDTLTSGADDAPTKVAALYAPDALFWGTVSEQLRTTPQHVLEYFEYFARSPKLTMTRLNPGKVQMHGDIGIQAGDYTFTWVGADGP-VEVDARFTFHFRREADG----WKIVEHHSSAMPTAPPALKP 1825
            D+KA+      W+DT+T G DDAP K AALYA DA+ WGTVSE++R TP+ + +YF++FAR PKL +    P  V+++G   ++AG YTF W G DG  VE  ARF+F FRR+  G    W IVEHHSS+MP AP  LKP
Sbjct:  287 DQKAVAATTIVWKDTVTLGTDDAPKKTAALYAADAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLVEYTPAPVRVYGQFAVEAGTYTFAWQGDDGKTVEKRARFSFTFRRDKPGSPQPWTIVEHHSSSMPIAPAELKP 426
[Close]
BLAST of mRNA_C-linearis_contig78.15364.1 vs. uniprot
Match: D7FUF9_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF9_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 2.590e-35
Identity = 75/141 (53.19%), Postives = 94/141 (66.67%), Query Frame = 2 
Query: 1421 DEKAINKAVENWRDTLTSGADDAPTKVAALYAPDALFWGTVSEQLRTTPQHVLEYFEYFARSPKLTMTRLNPGKVQMHGDIGIQAGDYTFTWVGADGP-VEVDARFTFHFRREADG---WKIVEHHSSAMPTAPPALKPAM 1831
            D+KA+      W+DT+T G DD P K A LYA DA  WGTVSE++R TP+ +  YF+YFAR P L +    P  V+++GD  +QAG YTF+W   DG  VE  ARF+F FRR+ +    W IVEHHSS+MPTAP  LKPAM
Sbjct:  331 DQKAVAATAVVWKDTVTMGTDDTPRKTADLYAQDATLWGTVSEEVRDTPEQIYAYFDYFARLPALRLVEYTPVAVRVYGDFAVQAGTYTFSWQDNDGDTVEKRARFSFTFRRDPNKPQQWAIVEHHSSSMPTAPAGLKPAM 471
[Close]
BLAST of mRNA_C-linearis_contig78.15364.1 vs. uniprot
Match: A0A6H5JSB2_9PHAE (DUF4440 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSB2_9PHAE)

HSP 1 Score: 140 bits (353), Expect = 1.020e-33
Identity = 65/138 (47.10%), Postives = 89/138 (64.49%), Query Frame = 2 
Query: 1421 DEKAINKAVENWRDTLTSGADDAPTKVAALYAPDALFWGTVSEQLRTTPQHVLEYFEYFARSPKLTMTRLNPGKVQMHGDIGIQAGDYTFTWVGADG-PVEVDARFTFHFRREADG---WKIVEHHSSAMPTAPPALK 1822
            D K + +    W++ +T G  DAP K A LYA D + WGTVSE++R TP+ + +YF+YFAR P L ++   P  ++++GD   +AG YTF W G DG P E  ARF+F FR + +    W IVEHHSS+MPT+P  LK
Sbjct:  103 DRKGVEQTTIRWKEMVTLGTPDAPRKTADLYAVDGVLWGTVSEEVRDTPEEIYDYFDYFARLPNLRLSEFTPVSLRVYGDFATEAGTYTFKWQGEDGVPKEKRARFSFTFRSDPESPTSWTIVEHHSSSMPTSPLQLK 240
[Close]
BLAST of mRNA_C-linearis_contig78.15364.1 vs. uniprot
Match: D7FN21_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN21_ECTSI)

HSP 1 Score: 145 bits (367), Expect = 1.190e-32
Identity = 72/139 (51.80%), Postives = 92/139 (66.19%), Query Frame = 2 
Query: 1421 DEKAINKAVENWRDTLTSGADDAPTKVAALYAPDALFWGTVSEQLRTTPQHVLEYFEYFARSPKLTMTRLNPGKVQMHGDIGIQAGDYTFTWVGADGP-VEVDARFTFHFRRE----ADGWKIVEHHSSAMPTAPPALK 1822
            D+ A+      W+DT+TSG  DAP K AALYA D + WGTVSE++R TP+ +  YF+YFAR P+L +    P  V+++GD  +QAG YTF + GADG  VE  ARF+F FRR+       W IVEHHSS+MP AP  LK
Sbjct:  133 DKAAVAATTVVWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRLVEYTPVAVRVYGDFAVQAGTYTFAFQGADGATVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPNAPAGLK 271
[Close]
BLAST of mRNA_C-linearis_contig78.15364.1 vs. uniprot
Match: A0A6H5LB09_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB09_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 1.620e-32
Identity = 74/140 (52.86%), Postives = 94/140 (67.14%), Query Frame = 2 
Query: 1418 ADEKAINKAVENWRDTLTSGADDAPTKVAALYAPDALFWGTVSEQLRTTPQHVLEYFEYFARSPKLTMTRLNPGKVQMHGDIGIQAGDYTFTWVGADGP-VEVDARFTFHFRREADG----WKIVEHHSSAMPTAPPALK 1822
            AD+ A+      W+DT+TSG  DAP K AALYA D + WGTVSE++R TP+ +  YF+YFAR P+L +    P  V+++GD  +QAG YTF + GADG  VE  ARF+F FRR+  G    W IVEHHSS+MP AP  LK
Sbjct: 1257 ADKAAVAATTIIWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGADGETVEKRARFSFTFRRDHPGSPTPWTIVEHHSSSMPNAPAGLK 1396
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig78.15364.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K7Z6_9PHAE7.890e-5155.06DUF4440 domain-containing protein n=7 Tax=Ectocarp... [more]
A0A6H5K6U8_9PHAE5.710e-5056.55DUF4440 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5JT29_9PHAE4.640e-3848.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JX02_9PHAE1.180e-3653.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0Z5_9PHAE2.010e-3653.96PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
D7FUF8_ECTSI5.200e-3652.86Similar to Uncharacterized protein conserved in ba... [more]
D7FUF9_ECTSI2.590e-3553.19Similar to Uncharacterized protein conserved in ba... [more]
A0A6H5JSB2_9PHAE1.020e-3347.10DUF4440 domain-containing protein n=2 Tax=Ectocarp... [more]
D7FN21_ECTSI1.190e-3251.80Similar to Uncharacterized protein conserved in ba... [more]
A0A6H5LB09_9PHAE1.620e-3252.86Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig78contigC-linearis_contig78:503144..508478 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score186.4
Seed ortholog evalue1.2e-44
Seed eggNOG ortholog2880.D8LFN8
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.SnoaL-like domain
EggNOG OGs2S0Y2@2759,COG4875@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size3182
Cds size555
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig78.15364.1prot_C-linearis_contig78.15364.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig78 504423..506762 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930483.6615539-UTR-C-linearis_contig78:503143..5044221622930483.6615539-UTR-C-linearis_contig78:503143..504422Chordaria linearis ClinC8C monoicousUTRC-linearis_contig78 503144..504422 +
1690881093.2391188-UTR-C-linearis_contig78:503143..5044221690881093.2391188-UTR-C-linearis_contig78:503143..504422Chordaria linearis ClinC8C monoicousUTRC-linearis_contig78 503144..504422 +
1622930483.7823443-UTR-C-linearis_contig78:506762..5067981622930483.7823443-UTR-C-linearis_contig78:506762..506798Chordaria linearis ClinC8C monoicousUTRC-linearis_contig78 506763..506798 +
1690881093.3156939-UTR-C-linearis_contig78:506762..5067981690881093.3156939-UTR-C-linearis_contig78:506762..506798Chordaria linearis ClinC8C monoicousUTRC-linearis_contig78 506763..506798 +
1622930483.8047926-UTR-C-linearis_contig78:507166..5084781622930483.8047926-UTR-C-linearis_contig78:507166..508478Chordaria linearis ClinC8C monoicousUTRC-linearis_contig78 507167..508478 +
1690881093.3280528-UTR-C-linearis_contig78:507166..5084781690881093.3280528-UTR-C-linearis_contig78:507166..508478Chordaria linearis ClinC8C monoicousUTRC-linearis_contig78 507167..508478 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930483.6830275-CDS-C-linearis_contig78:504422..5045241622930483.6830275-CDS-C-linearis_contig78:504422..504524Chordaria linearis ClinC8C monoicousCDSC-linearis_contig78 504423..504524 +
1690881093.253696-CDS-C-linearis_contig78:504422..5045241690881093.253696-CDS-C-linearis_contig78:504422..504524Chordaria linearis ClinC8C monoicousCDSC-linearis_contig78 504423..504524 +
1622930483.701629-CDS-C-linearis_contig78:504876..5049161622930483.701629-CDS-C-linearis_contig78:504876..504916Chordaria linearis ClinC8C monoicousCDSC-linearis_contig78 504877..504916 +
1690881093.2700005-CDS-C-linearis_contig78:504876..5049161690881093.2700005-CDS-C-linearis_contig78:504876..504916Chordaria linearis ClinC8C monoicousCDSC-linearis_contig78 504877..504916 +
1622930483.7226331-CDS-C-linearis_contig78:505415..5055821622930483.7226331-CDS-C-linearis_contig78:505415..505582Chordaria linearis ClinC8C monoicousCDSC-linearis_contig78 505416..505582 +
1690881093.2789853-CDS-C-linearis_contig78:505415..5055821690881093.2789853-CDS-C-linearis_contig78:505415..505582Chordaria linearis ClinC8C monoicousCDSC-linearis_contig78 505416..505582 +
1622930483.741124-CDS-C-linearis_contig78:506123..5063601622930483.741124-CDS-C-linearis_contig78:506123..506360Chordaria linearis ClinC8C monoicousCDSC-linearis_contig78 506124..506360 +
1690881093.2910423-CDS-C-linearis_contig78:506123..5063601690881093.2910423-CDS-C-linearis_contig78:506123..506360Chordaria linearis ClinC8C monoicousCDSC-linearis_contig78 506124..506360 +
1622930483.7650516-CDS-C-linearis_contig78:506753..5067621622930483.7650516-CDS-C-linearis_contig78:506753..506762Chordaria linearis ClinC8C monoicousCDSC-linearis_contig78 506754..506762 +
1690881093.30313-CDS-C-linearis_contig78:506753..5067621690881093.30313-CDS-C-linearis_contig78:506753..506762Chordaria linearis ClinC8C monoicousCDSC-linearis_contig78 506754..506762 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig78.15364.1

>prot_C-linearis_contig78.15364.1 ID=prot_C-linearis_contig78.15364.1|Name=mRNA_C-linearis_contig78.15364.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=185bp
MKKMFLFNLGCCVIDTCGCLDDEAFGGVRANMTQAGARSFFSSGPSADEK
AINKAVENWRDTLTSGADDAPTKVAALYAPDALFWGTVSEQLRTTPQHVL
EYFEYFARSPKLTMTRLNPGKVQMHGDIGIQAGDYTFTWVGADGPVEVDA
RFTFHFRREADGWKIVEHHSSAMPTAPPALKPAM*
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mRNA from alignment at C-linearis_contig78:503144..508478+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig78.15364.1 ID=mRNA_C-linearis_contig78.15364.1|Name=mRNA_C-linearis_contig78.15364.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=5335bp|location=Sequence derived from alignment at C-linearis_contig78:503144..508478+ (Chordaria linearis ClinC8C monoicous)
AACACATCAAACTCCCAAGCCTCATCACGCCTCACATCCTTTCTTCATCG
TTCAGGTGATTCGAGCGATAGAGTGTGTCCCACATCAAAGGGAAAGCGGT
AGATGACCAGTTGCGGTTGTCCAGCTCTGATGATTCGCGTACATGCCCTT
ACCTGTCTGCAGGAGGAGGGAGGCAGTCGCGCTCCTGTACGCACATGTGG
GTGTCTTCTTGTAGTCTGCCTGCACATGCAGTTTCTTTTGTTGCGTCATC
TTTTTGGCTCTCGCGGTGTTTTTCGGTCTTGCGTGCTCGGGTTGTAGCGT
CGAGAGGTGACTAAATCATGTTATCCCTACCCTTCTCCGCCGTCCCTCGC
GCACGCAGTCAAACTTTTTACCAGGCACAATGATGAACGTCGGAAGGACC
GCATCCAGGGTGGGGAGGGTCGTGGTGGCCCAGGCCTCCAAGAACGCGAC
GCTGTCCACCAGGGCGGTTGTACCCGCGGCCAGGCTCTCCGTCGCCAACT
TCCCGATGAAGCAACTGCCAATCGCACACGTAAGATGGGGTTGTGGGAGT
TTTGTTTCATGCGAAACATTGCCCTCTTTTTTTTCTGCATGGCCTTTGCA
CCCGCTGGAAGGGACCCCACTTTAATCCTCATGACGATTGCCAAACATGG
TCTGCTGGTCCATCCGGGCACTTTTTACCACGCCCGCTTCCTCGGGTACT
GCGCACGCATAGTGGAGGAGATGAGTTTTCCGTGTGGGTGCTCCAGCAAA
ACGACGAAACCTCTGAAAGCCAGCCGTCCTGCTTTTTTGCTCCTATGCGC
CCTGCTCTTGGTAGGACACGTATGATATGTACACGTACAGCAGTTTTGCG
CCGCACTTAAAAATCATCCGGAGTACTTTTCGCAAGACAGCTTTTGCACG
TAACTTCTGGAAGGAAGACTGATCCCTTTATCGCAAAAGCGGCGCAGTCA
TCCCGCACATTCGAGGTTCGCAGCGTTTGGAATGTGTTGCTGGGCCGGCA
CTCTGGGCCCTCACTCTGCGCATCTAGCGTACAGAAATATGCCGCCCCGG
CGGACGATAGCGAAACATCATCACACGTGTTTTTTTTTCCCGCGGAGTGT
TTCCCTCCCACACCCGCGCACGTATGTTCGGTCGTGTAGGGTCCAATTCG
TGTGTGGATACCAAAAACACTTAAATCCACGCGCTCAAATCTTTGTACGT
ATGTAGGTAGGCACATGGCGAGCTACCCCGTGATCGGGGAAAATAACCTC
TCGTGCCCAGGTGATTTCGCCACACATGCATGAAGAAAATGTTCTTGTTC
AACCTCGGGTGTTGCGTTATCGATACATGCGGCTGTTTGGATGATGAGGC
ATTTGGTGGCGTCCGGGCTAACATGACACAGGCGAGGAGCTCAGCTTGAT
CGGTTTCTGTGCGTTGCACGACCTGCAGCAGGAGTACAAATGCTATTCGC
GCTCAAAAGTTGTTGGGGTTGAAGAGCTCCGAGAGTCTCAAAGTGACGCA
AAAATATGTCGTGCAGACGAGTCACCCGGAACAACCCGCATCGCCGTTAA
AATTTGTGCCTCTTTTTTCCTCGGCTGTTGGTCGTGTGTCCCGTGCCAGA
GCAGTGAACAACCGGCGCTCTCCCCCTACTCTGTCTCCAACCCCACGCGT
ATGAAACTTTCTTTCATTTTGGCCTGGAAACACGCTGCCCAACGCACCCA
CTCGCTCGTTCTATCGCTCTTTCGCAATTCCAGGCAGGAGCTCGCTCGTT
CTTCTCCTCGGGCCCCTCCGCTGGTAAGACGATTCCGTTGCCATTCTACT
TGCTGCCATTTCTTACTATTTGAGTTGTTCGCAACAGCAGCCAGCCGTAG
CCACCGACGTGCTGCTTCAAGGGTGTTTACTGCTGCTGTAGGGTCGTTTA
TTTTGGAGCACGGGTGTCGTCTGGCGGTTCGAAGTTTTGTAACTGTGTTT
CGGTTCTGTGTGTCGTTTGTTTCCCGCTACAGCACACTCCCTCCGCGTGA
AGTACCCCCTTTTACAAACGCCTCGGTTGTGCGGCCGACATGAAGTAAGT
CTAGTTTGGTGGTCGTGCGAGAGAATCTAGACGCTGTCGATGTTGCAGGA
TTATTCCCACGTAGAGCAAAAGACATTTCTCCCATCTTTTGTATTTTACA
CATTGCTTGCTTTTCACTTGTTTTTTCCTGGAGGTTCGCGAAACATAATT
CCCGAAAACTTGCCCCGACACTCCTGTCCCCACCGCTTCCGTGATTCGTT
TCTTCGTTTGTCCAATGAACAGACGAGAAGGCCATCAACAAGGCTGTCGA
GAACTGGAGGGACACCCTCACCTCCGGAGCTGACGACGCGCCGACGAAGG
TCGCCGCCCTCTACGCTCCCGACGCACTGTTCTGGGGAACCGTATCGGAG
CAGCTCCGCACCACCCCGCAGCACGTCCTCGAATACTTTGTGAGTGTTGC
ACCTGCAGACAAAAGAGCACCTGATTGAGACGGTTTTTGTTTTCATCTTG
CAGTTGGCTGCGGTGTTTGGTTTGCTGGCGGTAGCTTACTCTTGCATGTC
CTTGGCAAAGTATTGTGGCTTCTTCGATTTCGGCCCTTTACACCGGCGGC
GTATTTTCGAGGGGGGCGTCCTGCATACCGCTCCGCCCGGCAGATAGGTT
TTGTGTGATGTGTTGGATATACGACGTCTTGTGGTGTTCGCTGCTGCTCG
TCTTTTATTTTTTGGCATGTTTTGCCTCGCCCGCAGTCACTATATACTAA
ATACCTCGCTGCCGACCATCTCATCGCACTCACTCCAAACTCTAGAACCC
AATCAAACGTCGCTGTTGCCAAACAAATAGTGACTTTTAGGTGACGCTAC
ATGCCCGTACATTCTCGAAACAGAACGCCGCGAACCAAGTGTGGCGAGAG
CCTCTTTCCGCCCGAGCCGACGATAGTCCTCTCTCTCTCCCTCTCTTTAT
TCGTAACTCTCGCCGCCGGGAAAAAAACAGGAGTACTTCGCGCGCTCGCC
CAAGCTCACCATGACCCGGCTCAACCCCGGAAAGGTCCAAATGCACGGCG
ACATCGGCATCCAGGCCGGCGACTACACCTTCACCTGGGTCGGAGCTGAC
GGGCCCGTGGAGGTGGACGCGCGCTTCACCTTCCACTTCCGGCGGGAGGC
CGACGGCTGGAAGATCGTGGAGCACCACTCGTCTGCGATGCCCACCGCGC
CCCCGGCGCTCAAGCCCGTGAGTGATAGTCGGCGCGTATGTGTGAAGTAT
GGGTTCGTGCATGAGGGGATGGGATCCTGTTGTTGGCTGGGTGCTCGTGT
TTTGGGTCTTGTGGGAGTGGGTTTTCGACGTATACATTAATTGTTCTCGA
ACGTTGGGTTGGCTGTTGTCCCCGAGGGTCTCATCTCGTCTTGTCTTATG
ACGGTCCGAGCGAATTGATATCGACGATTCCCGAAGACACATGGGGTTTG
GCGCTCTCTCTCGCCCCCATCATTGCCCTTTGTGGCACGTATAAATTGCC
ACAGCGCCACTGTCTGCGCCAAGTCCGATCACCTCACTTCACCTGGCCCA
ACCTCACCTCACCTCATTCCACATCCAACCCATGCTGAATCGCGCTGCCA
CCGTTCACAGGCCATGTAAGCCTTCGGAGATGCCTTCGGAGATGAAGATG
CACATGTGAGTGTACCGCGTAGCAGAGTCGTGCGTCCATGGAGTGCTGCT
CTTCGTCGACCGCGCGTTGTATGTAGCATCTCGCTTTGTTGTCGGTTGCG
CGCCCGGCCCGCATCAAGTACACTCAAGTTTTTGTTGTCGTTTTCTGCCG
TTGTCGCTAGGCAGTCTCTACGCTGGACACTTTTTCTCCATATTGTTTTA
ATGACCCCAGTCCGTCTCTCAAGTCCAGATGCCTTTAGTTTGTTTTTTCC
GCTCACCACCGCAGCGCACGTTTAGCGTAAACTCATTTTGTTGTCCCCGT
CCCGCCCCGCGCGCCCTTCTTACAATTTCCCGGCCCGTCGTTTTTCTTTT
TCCATGCATTGCGATTTCGACAGACGTCCCAGCCGCGCAAGTATCCGACC
GCGTGAGGGGCGGGGAGGCCAGGCAGGAGGCGTGGAAACAACGTTTCCAA
AACCCCGAGTCTAATAAAATATCGTGATTCAGGGAACGCAAGAAGGGTTT
TGGTGCTTCCATCTGTTTTTTTAGGGTTTTCTCGCCCGCCGCTCGTAAGC
CTCGTGGCTATTTTGATGATACACCTCGGCTTTTTTATGGATAGTCTAGA
ATATATTTTTGTTGGTTCTTTTAAGTCGGTTCGGCGATCGCTTTGCTAAA
TCGAAAATAGAAGCCATGTCTGGAGCTCCCGAACCTCTGTTGATGGTGCG
ATTGGCAGGTGATAGGATGTAGGTTGGTGGGGCGCATATTTCATGCGGGG
AATGCTGACGGCGAAGGTCCGGGCGTGGCGCGCAATCCCTCACAGTTTGA
ATGAGCCGGCAAAAGGGTGTTTTTAGAGCTCATCACAAAAAGAATAGATT
CGGCATTGACATGCTCTTGTAAGTGGTTGGCGGGGGGCTATTCCGGCGGG
GGCTTTCCCGTGTCTTTTCGATTTTGCTGACACGTGCTGGCCTAGAAATA
CACGGGACTGTTCCCAAGGCACTCTTCTGAGTAGAGTCGTATGCTTTTCG
AGTCGGGTGGGTGTTCCTCTGGTGGCTCGAGAGTCGACTTGAAAGTGCAC
GCCTTCTGTCTGTCCCCCAAGGAGTTACCGATGGACAGAATGGCGAGGTT
GTGGATCAGTGTGAGTGGATCCGTAAGCGACATATACTACCCAGTGCGTT
CACTGGTTCGAAATATATATGTATTTTTCCAGCGCCTTGCTCCCGTGGCA
ACGTTGCACCCTCATAAGCAAGGTTAAACGTTGTATCATTTTAACTGGTG
GAGGTTGCAACTGGAGTGTCTTGACGGTGCTGCTACTGCTGTTGCAACCA
CCCAGCGTGGATCGTGGGCCATCGTGGTCCATGCGGAGCTCCCTTTCTAC
CTTGCATTCCTATTGGTGCTGCTTCCCGTGTGCCATATGCAAGAAGCTCA
GCAATATACACCTTAAACCTGAGACCCAAGAGCTTCCAAACCAGCCGGGG
TGAAATCTCTTTCAATAAATACAGTTTTTTCGCCCATGATCCATGAACCA
AGAAGAGGCTGGGGCTGTAGACTTAAGCCCCGTTTGTGGTTTGTGCGCAA
TTCAACGATCATACACACCAGCATAATATAGCCGTAGAACGCTTAAATTG
ACCCCCTGAACATTTCGTGAGCATACAGTGGTATTTTTCCTGAGGCCGAA
TTTCGTTGTCCCTCCATAACTTTTGACTGAAGTGG
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Coding sequence (CDS) from alignment at C-linearis_contig78:503144..508478+

>mRNA_C-linearis_contig78.15364.1 ID=mRNA_C-linearis_contig78.15364.1|Name=mRNA_C-linearis_contig78.15364.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1110bp|location=Sequence derived from alignment at C-linearis_contig78:503144..508478+ (Chordaria linearis ClinC8C monoicous)
ATGAAGAAAATGTTCTTGTTCAACCTCGGGTGTTGCGTTATCGATACATG
CGGCTGTTTGGATGATGAGGCATTTGGTGGCGTCCGGGCTAACATGACAC
AGATGAAGAAAATGTTCTTGTTCAACCTCGGGTGTTGCGTTATCGATACA
TGCGGCTGTTTGGATGATGAGGCATTTGGTGGCGTCCGGGCTAACATGAC
ACAGGCAGGAGCTCGCTCGTTCTTCTCCTCGGGCCCCTCCGCTGGCAGGA
GCTCGCTCGTTCTTCTCCTCGGGCCCCTCCGCTGACGAGAAGGCCATCAA
CAAGGCTGTCGAGAACTGGAGGGACACCCTCACCTCCGGAGCTGACGACG
CGCCGACGAAGGTCGCCGCCCTCTACGCTCCCGACGCACTGTTCTGGGGA
ACCGTATCGGAGCAGCTCCGCACCACCCCGCAGCACGTCCTCGAATACTT
TACGAGAAGGCCATCAACAAGGCTGTCGAGAACTGGAGGGACACCCTCAC
CTCCGGAGCTGACGACGCGCCGACGAAGGTCGCCGCCCTCTACGCTCCCG
ACGCACTGTTCTGGGGAACCGTATCGGAGCAGCTCCGCACCACCCCGCAG
CACGTCCTCGAATACTTTGAGTACTTCGCGCGCTCGCCCAAGCTCACCAT
GACCCGGCTCAACCCCGGAAAGGTCCAAATGCACGGCGACATCGGCATCC
AGGCCGGCGACTACACCTTCACCTGGGTCGGAGCTGACGGGCCCGTGGAG
GTGGACGCGCGCTTCACCTTCCACTTCCGGCGGGAGGCCGACGGCTGGAA
GATCGTGGAGCACCACTCGTCTGCGATGCCCACCGCGCCCCCGGCGCTCA
AGCCCGAGTACTTCGCGCGCTCGCCCAAGCTCACCATGACCCGGCTCAAC
CCCGGAAAGGTCCAAATGCACGGCGACATCGGCATCCAGGCCGGCGACTA
CACCTTCACCTGGGTCGGAGCTGACGGGCCCGTGGAGGTGGACGCGCGCT
TCACCTTCCACTTCCGGCGGGAGGCCGACGGCTGGAAGATCGTGGAGCAC
CACTCGTCTGCGATGCCCACCGCGCCCCCGGCGCTCAAGCCCGCCATGTA
AGCCATGTAA
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