prot_C-linearis_contig78.15361.1 (polypeptide) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig78.15361.1 vs. uniprot
Match: D7G8V6_ECTSI (Rad51 homolog C n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8V6_ECTSI) HSP 1 Score: 441 bits (1135), Expect = 1.580e-153 Identity = 249/293 (84.98%), Postives = 263/293 (89.76%), Query Frame = 0
Query: 1 MLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVGGGALYIDTEGSLTVERLSQLCSAVVEHLQKIAKNKRKQGFPDMEATVPTQEALLGGVHVWRLHDHAEQLAAVRTLPKFLVAHPDVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQKHSLAVVLVNQMTTKVVAGHGGESSLVPALGESWAHAATNRCV---GGNDRFAELLKSPRLRQKTVPFSVVRVGIRDAHSSRAAXXXXXXXXXXXXXXXKRSSLPSSAAQQHQQPAAKRHVGNAPNQ 290
M+GGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVGGGALYIDTEGSLTVERLSQLCSAVVEHLQKIA+NKRKQG PD+E+ VPTQEA LGG+HVWRLHDHAEQLAAVRTLP+FLVAHP+VKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQ HSLAVVLVNQMTTKV+ GH GESSLVPALGESWAHAATNR + G +RFAELLKSPRLR+KTVPFSVV VGIRD SSRA XXXXXXXXXXXXXXX A++ Q AAKRHVG+ NQ
Sbjct: 49 MMGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVGGGALYIDTEGSLTVERLSQLCSAVVEHLQKIARNKRKQGVPDLESAVPTQEAFLGGIHVWRLHDHAEQLAAVRTLPEFLVAHPEVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQAHSLAVVLVNQMTTKVMTGHRGESSLVPALGESWAHAATNRLLLLWKGQERFAELLKSPRLRRKTVPFSVVGVGIRDTQSSRAXXXXXXXXXXXXXXXXXXXXXXXXASEGQYQ-AAKRHVGHHANQ 340
BLAST of mRNA_C-linearis_contig78.15361.1 vs. uniprot
Match: A0A835ZD48_9STRA (Rad51-like protein c n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD48_9STRA) HSP 1 Score: 268 bits (685), Expect = 1.700e-84 Identity = 149/261 (57.09%), Postives = 180/261 (68.97%), Query Frame = 0
Query: 1 MLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVGGGALYIDTEGSLTVERLSQLCSAVVEHLQKIAKNKRKQGFPDME------ATVPTQEALLGGVHVWRLHDHAEQLAAVRTLPKFLVAHPDVKL------------VVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQKHSLAVVLVNQMTTKVVAGHGGESSLVPALGESWAHAATNRCV---GGNDRFAELLKSPRLRQKTVPFSVVRVGIRD 240
M GGGVPRGELTE+ GTPG+GKTQFGMQLAVDVQIP FGGVGG A+YIDTEGS T ER++Q+ A+V HL +++ RK+ P A + T+E LL +HV+R+HDHAEQLAAVR LP F+ + VV+DSVAFHFRHA DM++R RML+ M QQLN++A++ SLAVVL NQMT + +G GE LV ALG++WAHAATNR + N RFA LLKS R TVPF V RVGIRD
Sbjct: 115 MFGGGVPRGELTEIMGTPGIGKTQFGMQLAVDVQIPVLFGGVGGEAVYIDTEGSFTPERVAQMADALVSHLARVSAAHRKKQTPAQAEQWAAAAALVTREYLLRRIHVFRVHDHAEQLAAVRALPAFVASRSGXXXXXXXXXXXXXXXVVLDSVAFHFRHACADMALRARMLATMGQQLNQLAREQSLAVVLTNQMTKRYDSGRNGEEKLVAALGDTWAHAATNRLMLFWKENQRFASLLKSSRREPATVPFIVDRVGIRD 375
BLAST of mRNA_C-linearis_contig78.15361.1 vs. uniprot
Match: UPI00201F1787 (DNA repair protein RAD51 homolog 3-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI00201F1787) HSP 1 Score: 244 bits (623), Expect = 1.260e-75 Identity = 132/248 (53.23%), Postives = 165/248 (66.53%), Query Frame = 0
Query: 1 MLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVGGGALYIDTEGSLTVERLSQLCSAVVEHLQKIAKNKRKQGFPDMEATVPT--QEALLGGVHVWRLHDHAEQLAAVRTLPKFLVAHPDVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQKHSLAVVLVNQMTTKVVAGHGGESSLVPALGESWAHAATNRCV---GGNDRFAELLKSPRLRQKTVPFSVVRVGIRDAHS 243
+LGGGVP ++TE CG PG+GKTQ MQL +DVQIP FGG+ G +Y+DTEGS VERL + SA VEH IA + G D++ E LL G+H +R HD+ E L+ V LPKF+ H VKLV++DS+AFHFRH F DMS+RTR+L+ MAQ +A +H LAVVL NQMTTK+ G GG S L+PALGESW HA+T R V GN+R+A L KSP ++ VPF + GIRD S
Sbjct: 101 ILGGGVPLAKITEFCGAPGIGKTQVCMQLGIDVQIPECFGGLDGETVYVDTEGSFIVERLVDIASATVEHCNNIA---QMDGSVDVKEAANNFNLEKLLSGIHYFRCHDYIELLSTVHLLPKFVSEHKKVKLVIVDSIAFHFRHDFDDMSLRTRLLTSMAQSFIRLATEHKLAVVLTNQMTTKM--GGGGGSHLIPALGESWGHASTIRVVLYWEGNNRYALLYKSPSKKEAVVPFQITMGGIRDVQS 343
BLAST of mRNA_C-linearis_contig78.15361.1 vs. uniprot
Match: UPI001425896F (DNA repair protein RAD51 homolog 3-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425896F) HSP 1 Score: 241 bits (616), Expect = 1.650e-74 Identity = 129/247 (52.23%), Postives = 170/247 (68.83%), Query Frame = 0
Query: 1 MLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVGGGALYIDTEGSLTVERLSQLCSAVVEHLQKIAKNKRKQ-GFPDMEATVPTQEALLGGVHVWRLHDHAEQLAAVRTLPKFLVAHPDVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQKHSLAVVLVNQMTTKVVAGHGGESSLVPALGESWAHAATNRCV---GGNDRFAELLKSPRLRQKTVPFSVVRVGIRDAHS 243
MLGGG+P G+ TE+CG PGVGKTQ +QLAVDVQIP +FGG+ G A+YIDTEGS VER S++ AVVEH +A ++ ME T++ +L G+H R D+ E +A + TLPKFL HP V+L+V+DSVAFHFRH +++S+RTR+L+ +AQ L ++A ++++AVVL NQMTTK GG S L+PALGESW HAAT R + GN R A L KSP ++ TVP+ V G+R S
Sbjct: 96 MLGGGIPLGKTTEICGAPGVGKTQICIQLAVDVQIPEEFGGLEGEAMYIDTEGSFMVERASEIAKAVVEHCGNVAASQNNNVQLKSMEKF--TEDGILAGIHYTRCQDYIELIAFINTLPKFLSNHPKVRLIVIDSVAFHFRHDIENLSLRTRLLNGLAQNLIKLAMENTVAVVLTNQMTTKFGREDGG-SKLIPALGESWGHAATVRLILYWQGNQRLAMLYKSPSRQEMTVPYQVTNCGVRSIPS 339
BLAST of mRNA_C-linearis_contig78.15361.1 vs. uniprot
Match: UPI00148A3B53 (DNA repair protein RAD51 homolog 3-like n=1 Tax=Crassostrea gigas TaxID=29159 RepID=UPI00148A3B53) HSP 1 Score: 241 bits (614), Expect = 2.250e-74 Identity = 129/243 (53.09%), Postives = 168/243 (69.14%), Query Frame = 0
Query: 1 MLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVGGGALYIDTEGSLTVERLSQLCSAVVEHLQKIAKNKRKQGFPDMEATVPTQEALLGGVHVWRLHDHAEQLAAVRTLPKFLVAHPDVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQKHSLAVVLVNQMTTKVVAGHGGESSLVPALGESWAHAATNRCV---GGNDRFAELLKSPRLRQKTVPFSVVRVGIRD 240
MLGGGVP ++TE CG PGVGKTQ MQ+AVDVQIP QFGG+ G A+YIDTEGS VERL + A V+H ++A R +GF + E TV E++L GVH +R HD+ E LA V LP+F+ HP +K+V++DSVAFHFRH F D+S+RTR+L+ MAQ ++A + +A+VL NQMTTK G +S LVPALGESW HA+T R + G R+A L KSP ++ VP+ + G+RD
Sbjct: 100 MLGGGVPLCKITEFCGAPGVGKTQMCMQIAVDVQIPSQFGGLQGEAVYIDTEGSFIVERLVDIAKATVDHCNEMA---RLEGFKEGEITV---ESVLSGVHFYRCHDYVELLATVHLLPEFIKKHPKIKVVLVDSVAFHFRHDFDDLSLRTRLLTTMAQSFIKLATEFKIAIVLTNQMTTKFSPGE--DSRLVPALGESWGHASTIRVILYWEGQKRWAWLYKSPSKKESRVPYQITMGGVRD 334
BLAST of mRNA_C-linearis_contig78.15361.1 vs. uniprot
Match: A0A6P4XU31_BRABE (DNA repair protein RAD51 homolog 3-like n=3 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4XU31_BRABE) HSP 1 Score: 238 bits (606), Expect = 5.390e-73 Identity = 128/245 (52.24%), Postives = 165/245 (67.35%), Query Frame = 0
Query: 1 MLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVGGGALYIDTEGSLTVERLSQLCSAVVEHLQKIA--KNKRKQGFPDMEATVPTQEALLGGVHVWRLHDHAEQLAAVRTLPKFLVAHPDVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQKHSLAVVLVNQMTTKVVAGHGGESSLVPALGESWAHAATNRCV---GGNDRFAELLKSPRLRQKTVPFSVVRVGIRD 240
+LGGGVP ++TE CG PGVGKTQ GMQLA+DVQIP FGG+GG A+Y+DTEGS V RL + A VEH + IA +N R+Q + TV E +L +H +R+HD E +A + LP+FL HP ++LVVMDS+AF FRH F+D+S+RTR+L+ +AQ +A H AVVLVNQMTTK+ G++ LVPALGESW HA+T R + R+A L KSP + TVP+ V GIRD
Sbjct: 98 LLGGGVPLTKITEFCGAPGVGKTQMGMQLAIDVQIPCVFGGLGGEAVYVDTEGSFMVHRLEDMAKAAVEHCRHIATVENNREQLEAMSDFTV---EHILSRIHFYRVHDWVELVALINILPEFLQQHPKIRLVVMDSIAFPFRHDFEDLSLRTRLLNGLAQNCIRLADSHKAAVVLVNQMTTKMGHSGDGQAHLVPALGESWGHASTIRVLLFWEAGYRYARLYKSPTREEATVPYQVTMAGIRD 339
BLAST of mRNA_C-linearis_contig78.15361.1 vs. uniprot
Match: A0A8B6HFA0_MYTGA (RAD51-like protein 2 n=2 Tax=Mytilus TaxID=6548 RepID=A0A8B6HFA0_MYTGA) HSP 1 Score: 238 bits (607), Expect = 7.330e-73 Identity = 128/243 (52.67%), Postives = 164/243 (67.49%), Query Frame = 0
Query: 1 MLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVGGGALYIDTEGSLTVERLSQLCSAVVEHLQKIAKNKRKQGFPDMEATVPTQEALLGGVHVWRLHDHAEQLAAVRTLPKFLVAHPDVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQKHSLAVVLVNQMTTKVVAGHGGESSLVPALGESWAHAATNRCV---GGNDRFAELLKSPRLRQKTVPFSVVRVGIRD 240
MLGGGVP ++TE CG PG+GKTQ MQLAVDVQIP FGG+ G +YIDTEGS VERL + +A ++H Q+I++ + + + T E +L +H +R HD+ E LA V LP F+ HP VKLVV+DS+AFHFRH F D S+RTR+L+ MAQ ++A ++ +AVVL NQMTTKV HG S LVPALGESW HA+T R + G R+A L KSP ++ TVP+ V GIRD
Sbjct: 133 MLGGGVPLCKITEFCGAPGIGKTQMCMQLAVDVQIPECFGGLDGEVVYIDTEGSFIVERLVDVTTATIQHCQQISQMESDEETKSSMSQFTT-EKVLSRIHYYRCHDYVELLATVHLLPDFIKDHPKVKLVVVDSIAFHFRHDFDDFSLRTRLLTSMAQSFIKLATEYKIAVVLTNQMTTKVK--HGESSQLVPALGESWGHASTVRVILYWEGQQRYAWLYKSPSKKESTVPYQVTMGGIRD 372
BLAST of mRNA_C-linearis_contig78.15361.1 vs. uniprot
Match: UPI001B88DCEA (DNA repair protein RAD51 homolog 3-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88DCEA) HSP 1 Score: 237 bits (604), Expect = 9.050e-73 Identity = 128/248 (51.61%), Postives = 165/248 (66.53%), Query Frame = 0
Query: 1 MLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVGGGALYIDTEGSLTVERLSQLCSAVVEHLQKIAKNKRKQGFPDMEATVPTQEALLGGVHVWRLHDHAEQLAAVRTLPKFLVAHPDVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQKHSLAVVLVNQMTTKVVAGHGGESS-LVPALGESWAHAATNRCV---GGNDRFAELLKSPRLRQKTVPFSVVRVGIRDAHSS 244
MLGGGVP ++TE CG PG+GKTQ MQL VDVQI FGG+GG A+YIDTEGS VERL+ + A +H Q IA + + EA T E +L G++ +R HD+ E LA + LPKF+ HP VKLVV+DS+AFHFRH F+D+S+RTR+L+ +AQ ++A + LAVVL NQMTT+ G SS L+PALGESWAHA+T R + N R+A L KSP ++ V F + GIRD S+
Sbjct: 100 MLGGGVPLAKITEFCGAPGIGKTQICMQLCVDVQIRECFGGLGGEAVYIDTEGSFIVERLADIARATTQHCQHIASMDKSAELKE-EAESFTLEKILSGIYCFRCHDYVELLATIHLLPKFINQHPKVKLVVIDSIAFHFRHDFEDLSLRTRLLTSLAQSFIKMATEFKLAVVLTNQMTTRFRGSEGASSSHLIPALGESWAHASTIRVILYWDDNHRYALLYKSPSKKEAVVKFQITMGGIRDVVSN 346
BLAST of mRNA_C-linearis_contig78.15361.1 vs. uniprot
Match: UPI001EE548CA (DNA repair protein RAD51 homolog 3-like n=1 Tax=Haliotis rubra TaxID=36100 RepID=UPI001EE548CA) HSP 1 Score: 236 bits (602), Expect = 1.040e-72 Identity = 125/236 (52.97%), Postives = 156/236 (66.10%), Query Frame = 0
Query: 1 MLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVGGGALYIDTEGSLTVERLSQLCSAVVEHLQKIAKNKRKQGFPDMEATVPTQEALLGGVHVWRLHDHAEQLAAVRTLPKFLVAHPDVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQKHSLAVVLVNQMTTKVVAGHGGESSLVPALGESWAHAATNRCV---GGNDRFAELLKSPRLRQKTVPFSV 233
+LGGGVP ++TE CG PG+GKTQ MQL +DVQIP FGG+ G +Y+DTEGS VER+ + SA VEH IA+ G E LL G+H +R HD+ E L+ V LPKFL H VKLV++DS+AFHFRH F DMS+RTR+L+ MAQ +A +H LAVVL NQMTTK+ G G S L+PALGESW HA+T R V GN+R+A L KSP ++ VPF +
Sbjct: 101 ILGGGVPLAKITEFCGAPGIGKTQVCMQLGIDVQIPECFGGLDGETVYVDTEGSFIVERMVDIASATVEHCNNIAQMDGSDGDNF------NLEKLLSGIHYFRCHDYIELLSTVHLLPKFLSEHKKVKLVIVDSIAFHFRHDFDDMSLRTRLLTSMAQSFIRLATEHKLAVVLTNQMTTKMGGGAAGGSHLIPALGESWGHASTIRVVLYWEGNNRYALLYKSPSKKEAVVPFQI 330
BLAST of mRNA_C-linearis_contig78.15361.1 vs. uniprot
Match: UPI001CF10B6B (DNA repair protein RAD51 homolog 3-like isoform X1 n=4 Tax=Acropora TaxID=6127 RepID=UPI001CF10B6B) HSP 1 Score: 237 bits (605), Expect = 1.680e-72 Identity = 124/254 (48.82%), Postives = 173/254 (68.11%), Query Frame = 0
Query: 1 MLGGGVPRGELTEVCGTPGVGKTQFGMQLAVDVQIPHQFGGVGGGALYIDTEGSLTVERLSQLCSAVVEHLQKIAKNKRKQGFPDMEATVPTQ-------EALLGGVHVWRLHDHAEQLAAVRTLPKFLVAHPDVKLVVMDSVAFHFRHAFQDMSVRTRMLSRMAQQLNEVAQKHSLAVVLVNQMTTKVVAGHGGESSLVPALGESWAHAATNRCV---GGNDRFAELLKSPRLRQKTVPFSVVRVGIRDAHSS 244
MLGGGVP G++TE CG PG+GKTQ G+QLAVDVQIP +FGG+ G A+YIDTEGS VER+ + +A V+H++ +A + + E ++ T+ E +L ++V+R HD+ + +A LP FL+ H VKL+V+DS+AF FRH F D+++RTR+L+ +AQ ++A ++ LAVVL+NQMTT+V G+S L+PALGESW HA+T R V N RFA L KSP ++ TVPF + G+RD SS
Sbjct: 105 MLGGGVPVGKITEFCGAPGIGKTQIGIQLAVDVQIPDEFGGLNGEAIYIDTEGSFIVERVVDIAAAAVKHMEHVAHSSE---IDETERSLQTEAMRNFQVENILSKIYVFRCHDYMQLIALSHVLPDFLLEHSKVKLIVVDSIAFQFRHDFDDLALRTRLLNGLAQSFIKMACENQLAVVLMNQMTTRVKTSQLGQSHLIPALGESWGHASTIRIVLYWEENQRFANLYKSPSRQEMTVPFKITGDGVRDCFSS 355 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig78.15361.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig78.15361.1 ID=prot_C-linearis_contig78.15361.1|Name=mRNA_C-linearis_contig78.15361.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=294bpback to top |