prot_C-linearis_contig78.15353.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig78.15353.1
Unique Name	prot_C-linearis_contig78.15353.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	369

Homology

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BLAST of mRNA_C-linearis_contig78.15353.1 vs. uniprot
Match: A0A6H5JM75_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM75_9PHAE)

HSP 1 Score: 144 bits (362), Expect = 2.690e-37
Identity = 74/113 (65.49%), Postives = 83/113 (73.45%), Query Frame = 0

Query:    1 MANPLTQTDIIKCLVESVDDEQYIFFAGVSRGWRDAWGNRPTRTRAVTAFTTGAQLRQSFECG-QPLETVCRSIAALGKLDLLQCARERG-CPWDADTCSYAAENGHLEVLQW 111
            M NPL Q DI+  L+E V  EQYIFFAGVSR WRDAW  RPT TRA TA T   QL QSF+CG  P  TVCR IAALG+LDLL  ARE+  CPWD +TCS A+ENGH +VL+W
Sbjct:    1 MPNPLMQPDIVFRLMEFVGGEQYIFFAGVSRTWRDAWEGRPTTTRAFTADTGVPQLSQSFKCGLAPRSTVCRDIAALGRLDLLVSAREQHECPWDEETCSCASENGHADVLRW 113

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BLAST of mRNA_C-linearis_contig78.15353.1 vs. uniprot
Match: D7G8W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W5_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 1.000e-32
Identity = 67/99 (67.68%), Postives = 74/99 (74.75%), Query Frame = 0

Query:   15 VESVDDEQYIFFAGVSRGWRDAWGNRPTRTRAVTAFTTGAQLRQSFECGQPLE-TVCRSIAALGKLDLLQCARER-GCPWDADTCSYAAENGHLEVLQW 111
            +E V  EQY+FFAGVSR WRDAW  RPT TRAVTA T   QL QSFECG     TVC+ IAALG+LDLL  ARE   CPWD DTCSYA+ENGH +VL+W
Sbjct:    1 MEFVGGEQYLFFAGVSRTWRDAWEGRPTTTRAVTADTGVPQLSQSFECGLARRSTVCQDIAALGRLDLLVSAREEYECPWDEDTCSYASENGHADVLRW 99

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BLAST of mRNA_C-linearis_contig78.15353.1 vs. uniprot
Match: D7G8V2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8V2_ECTSI)

HSP 1 Score: 119 bits (298), Expect = 2.130e-26
Identity = 56/92 (60.87%), Postives = 67/92 (72.83%), Query Frame = 0

Query:    7 QTDIIKCLVESVDDEQYIFFAGVSRGWRDAWGNRPTRTRAVTAFTTGAQLRQSFECGQPL-ETVCRSIAALGKLDLLQCARERGCPWDADTC 97
            Q+D+  CLVE VD EQ++FFAGV R W++AWG RP  TRAVT  TT AQL Q+F+CG  L   VC S+A LG+LDLLQCAR  GC W+  TC
Sbjct:    8 QSDVASCLVEFVDYEQFLFFAGVCRAWKEAWGQRPPTTRAVTEDTTVAQLSQNFQCGLSLIADVCTSVAKLGRLDLLQCARRHGCAWNEVTC 99

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BLAST of mRNA_C-linearis_contig78.15353.1 vs. uniprot
Match: A0A6H5L0J7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0J7_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 1.920e-24
Identity = 51/90 (56.67%), Postives = 64/90 (71.11%), Query Frame = 0

Query:    9 DIIKCLVESVDDEQYIFFAGVSRGWRDAWGNRPTRTRAVTAFTTGAQLRQSFECG-QPLETVCRSIAALGKLDLLQCARERGCPWDADTC 97
            DI+  + E VDD QY+FFA VSRGWRD WG RPT T+A+TA T+  QL  SFECG +    VC ++A LG+LDLL+ AR  GC W+ +TC
Sbjct:    8 DIVSTVAEFVDDNQYLFFASVSRGWRDVWGKRPTVTKALTADTSVPQLSLSFECGLRRTAAVCETVAGLGRLDLLRRARAMGCQWNENTC 97

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BLAST of mRNA_C-linearis_contig78.15353.1 vs. uniprot
Match: D7FMS7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMS7_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 2.270e-24
Identity = 52/90 (57.78%), Postives = 66/90 (73.33%), Query Frame = 0

Query:    9 DIIKCLVESVDDEQYIFFAGVSRGWRDAWGNRPTRTRAVTAFTTGAQLRQSFECG-QPLETVCRSIAALGKLDLLQCARERGCPWDADTC 97
            DI+  + E VDD QY+FFA VSRGWRD WG RPT T+A+TA T+ +QL  SFECG +    VC ++A LG+LDLL+ AR  GCPW+ +TC
Sbjct:   10 DIVSTVGEFVDDNQYLFFASVSRGWRDVWGKRPTVTKALTADTSVSQLSLSFECGLRRTAAVCETVAGLGRLDLLRRARAMGCPWNENTC 99

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BLAST of mRNA_C-linearis_contig78.15353.1 vs. uniprot
Match: A0A6H5L0K8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0K8_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 6.000e-24
Identity = 51/89 (57.30%), Postives = 64/89 (71.91%), Query Frame = 0

Query:   10 IIKCLVESVDDEQYIFFAGVSRGWRDAWGNRPTRTRAVTAFTTGAQLRQSFECG-QPLETVCRSIAALGKLDLLQCARERGCPWDADTC 97
            ++  L E VDD Q++FFA VSRGWRD WG RPT T+A+TA T+  QL  SFECG +    VC ++A LG+LDLLQ AR  GCPW+ +TC
Sbjct:   27 LLSYLAEFVDDNQHLFFASVSRGWRDVWGKRPTVTKALTADTSVPQLSLSFECGLRRTAAVCETVAGLGRLDLLQRARAMGCPWNENTC 115

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BLAST of mRNA_C-linearis_contig78.15353.1 vs. uniprot
Match: D8LFW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFW3_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 5.460e-22
Identity = 52/97 (53.61%), Postives = 65/97 (67.01%), Query Frame = 0

Query:    3 NPL-TQTDIIKCLVESVDDEQYIFFAGVSRGWRDAWGNRPTRTRAVTAFTTGAQLRQSFECG-QPLETVCRSIAALGKLDLLQCARERGCPWDADTC 97
            NPL    DI++CL + V DEQ++FFAGVS  WR+AWG RPT TRA+T   T +QL  SF CG +    VC +IA  GKL++L+ ARE  CPW   TC
Sbjct:   31 NPLDANVDIVRCLADFVHDEQHLFFAGVSTLWREAWGRRPTSTRAITEHVTPSQLCWSFSCGLRKRAEVCEAIAGFGKLEVLKRARELKCPWGRSTC 127

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BLAST of mRNA_C-linearis_contig78.15353.1 vs. uniprot
Match: D8LDD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDD9_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 6.330e-20
Identity = 55/104 (52.88%), Postives = 67/104 (64.42%), Query Frame = 0

Query:    1 MANPLTQT-DIIKCLVESVDDEQYIFFAGVSRGWRDAWGNRPTRTRAVTAFTTGAQLRQSFECG-QPLET-VCRSIAALGKLDLLQCARERGCPWDADTCSYAA 101
            M NP   T D+I    E V D+Q++FFA VSR WR AW  RPT TRA+T  T+ +QLR S +CG  P  T VC +IA+LG+LDLL+ AR  G  WD  TC  AA
Sbjct:    1 MGNPFQATADVISHASEFVHDDQFLFFASVSRAWRGAWRGRPTSTRAITPDTSPSQLRHSVDCGLSPGGTAVCTAIASLGRLDLLRAARALGFRWDKMTCWKAA 104

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BLAST of mRNA_C-linearis_contig78.15353.1 vs. uniprot
Match: D7FH49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FH49_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 2.260e-17
Identity = 49/100 (49.00%), Postives = 61/100 (61.00%), Query Frame = 0

Query:    5 LTQTDIIKCLVESVDDEQYIFFAGVSRGWRDAWGNRPTRTRAVTAFTTGAQLRQSFECGQPLETV--CRSIAALGKLDLLQCARERGCPWDADTCSYAAE 102
            +T  DI+  L + V D+Q++FFA VSR WRDAWG R T T  VT  TT  QL+ SF CG   + V  C + A  G LDLL+ A E+GCPW     + AAE
Sbjct:   20 MTNMDIVHGLAQFVLDKQFLFFAAVSRSWRDAWGERATVTSWVTPHTTPFQLQYSFACGLARDGVDWCLTTARAGNLDLLRWATEQGCPWTRSLSAAAAE 119

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BLAST of mRNA_C-linearis_contig78.15353.1 vs. uniprot
Match: A0A6H5KPZ6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KPZ6_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 1.120e-15
Identity = 45/95 (47.37%), Postives = 63/95 (66.32%), Query Frame = 0

Query:    9 DIIKCLVESVDDEQYIFFAGVSRGWRDAWGNRPTRTRAVTAFTTGAQLRQSFECGQPLET--VCRSIAALGKLDLLQCARERGCPWDADTCSYAA 101
            D+++ +V  V ++Q++FFA VSR WR+AWG RP  T  VT  ++ +QLR SFE G P +   +C +IA LG L+LL+ AR  GC W+  T S AA
Sbjct:   62 DLLRSIVRFVAEKQFLFFAPVSRAWREAWGCRPAVTSWVTEDSSVSQLRYSFERGLPRDRPELCAAIARLGNLELLRSARGSGCAWNGLTFSEAA 156

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig78.15353.1 vs. uniprot

BLAST of mRNA_C-linearis_contig78.15353.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14


Match Name	E-value	Identity	Description
A0A6H5JM75_9PHAE	2.690e-37	65.49	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7G8W5_ECTSI	1.000e-32	67.68	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D7G8V2_ECTSI	2.130e-26	60.87	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L0J7_9PHAE	1.920e-24	56.67	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FMS7_ECTSI	2.270e-24	57.78	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L0K8_9PHAE	6.000e-24	57.30	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LFW3_ECTSI	5.460e-22	53.61	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LDD9_ECTSI	6.330e-20	52.88	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
D7FH49_ECTSI	2.260e-17	49.00	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5KPZ6_9PHAE	1.120e-15	47.37	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 53..366 e-value: 7.3E-21 score: 76.2
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 99..357
None	No IPR available	PANTHER	PTHR46586	FAMILY NOT NAMED	coord: 70..232 coord: 208..365

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig78	contig	C-linearis_contig78:279817..280923 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig78.15353.1	mRNA_C-linearis_contig78.15353.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig78 279297..286596 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig78.15353.1 ID=prot_C-linearis_contig78.15353.1|Name=mRNA_C-linearis_contig78.15353.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=369bp
MANPLTQTDIIKCLVESVDDEQYIFFAGVSRGWRDAWGNRPTRTRAVTAF
TTGAQLRQSFECGQPLETVCRSIAALGKLDLLQCARERGCPWDADTCSYA
AENGHLEVLQWCRGVEGCPWDSDTCTMAARRGFLDVLEWCRSNGCEWNKE
TSKLAAFGGHLEVVKWLKLNGCPWGVDTCYGAARGGHLDVLEWCRSNGCD
WDKWTTAGAAGAGHLDVLRWARDNGCVWDEDTCGVAAERGYVHILKFARL
NGCLWYEEEMCTAAAKGGHVEVLKYAHEEGCSWDENTCTYAAGSGHLAVL
KYAHEGGCPWDEGTCAAAAGSGFLETLTYAHEEGCPWDDNTCAYAMMEGH
LEILKYAREEGCPWDGFS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036770	Ankyrin_rpt-contain_sf