prot_C-linearis_contig78.15350.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig78.15350.1
Unique Nameprot_C-linearis_contig78.15350.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length2247
Homology
BLAST of mRNA_C-linearis_contig78.15350.1 vs. uniprot
Match: D7G8W8_ECTSI (Cleavage and polyadenylation specificity factor CG10110-PA n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W8_ECTSI)

HSP 1 Score: 1532 bits (3967), Expect = 0.000e+0
Identity = 1167/2058 (56.71%), Postives = 1275/2058 (61.95%), Query Frame = 0
Query:    1 MTSTAIFTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASILELYRVHRNDPNENATAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGFYLELAGTFPLAGNIASLATIPVAGTAATAXXXXXXXXXXXXPDILVVSFGDAKLALVAYDALLGRLETVSIHNFDAAAIGPGAAGVESGYGLASALKDRPATISAADPAGRCLAAVVAGCQLVVLPARRHVPRSVFVSEEAAERRRVVXXXXXXXXXXXXXXXXXXXXXX----VXXXXXXXXXXXXXXXXEASGESGSXXXXXXXXXXXXXXXXXXXGNVSRAHAAVSKPFTIDLEEAGVTGFIKAATFLEGFHEPALALLYEPIQTCAGRLASKRSTCRLVVFSINLTQGRAPSVWQVDNLPHDSWDLVAVPSPVGGVQVISTNAVMHVNQSEVRSILAVNGYAGATVEPALLGCPLRRGHSDWGWASFRRSHSEQEVVDLSSYDVCIELDVVKCAFLTATSMLLSLRTGEVYALRLHLTAAVPPSVRAGG--------GRGAPNRVVGQSMRPVGRASPCSVLAVDRVGGXXXXXXXXXASTGLVFMGSRVGDSLLVKYAVASAGTQPGKRGKGAAGVGTAGAAGLTRELKVEAEKEKEEWGGDGRERGSANGVVGGXXXXXXXXXXXXXXXXXXXXEGEALSDEPSAGVGRAAAVEEDPKEAAGLAGMEVDNSLGNGGXXXXXXXXXXXXXXXXAADPSVASDDASKEAATDTPAPRTSATEAGGAPVVPAADGYGIIDS-----------GVAAATPSKQPETAQKEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAGDHDSKQPDKKRSRVSSSXXXGRNDDAAVSPADIAPPPD---AAAAGIQGGVPPXXE-GGDRGS--------GPPYAVEAKRAASSDEKGAVAEAVDAMDTTSPRSADPAPATPAAGTTRLIREELEMIHEEE-DLYGARLGSSL--GARTRGSRAAPLANLGSKVGERIIEAVGFRLKVVDSICSLGPIVDAALVPSAYHVPKTD-----------------VPGSGHRAAPAGXXXXXXXXXXXGIRTSLVCAAGYGRQGSLSVFSAGLRTEVVVELSMRGATGVYTAPEGGGRPSGGRNRDTLVLVSCSSPPSPQAPLAADAGD--ESRPGHTRVLAFEEDARVVELADGTTGNPFVCDAATADVCVMAGGTVVQAHAQGLRVTRNRAAVFDVLASDDPEFGGLGAEAGVPVVRAAAAGSHACCLLSNLRLHLMALDDGDLMPLLPAEE-GEEXXXXXXXXXXXXGVWEGVEAVFMFGIQVGAVSEAETQQQRGRRQGL--EKGWWGGAAWGGTGSKSASAEVADATKPPLSGDQGEE------EEVEDTTSAYLVVCRKGGSVEVFSCEGRGAEGTRTRPVFRAAGAALAPSTLWNELLLPPVAAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSPVIDGEGEDGGVGALAVATGVVVANGRRGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPTSPVPAADPMEVD--GASPDAAAXXXXXEGGDKRAL--AVLTGGGKEGEED--------SVVCPAVVDVIVHPVGAVDGPAELRRLVLAMYLDNGSLLVYEARMCISPSSLSLRREQVTCFSKLCHDLITRPVKGVPPEAAVPNPARGRALRAVRSAAGQEGICFARPGCRSALGHFVAEKVRLGATVHGLIHLPHQLAQPGKTGDILKHLLRGRGHYVALVSTTEDALAEQPKTGLSKGEGEGGEQXXXXXXXXXXAAGLLDRHIVRHKASINRCSTAINNWTVADPSLGGAPPLLVPSFELRVVALTPGSTPPANSGNAATSPLEPTSSSTTEADH---DDKSGGSSGGKAEGEXXXXXXXXRGAGNVSGQAAEAALLLSSEAVESHPMDSGENGICMTLVRLEQGGSPRMYVAVGTGMNEPQGEDKAARGRLLLFEVDYAYLAREDGKHEHAVKLRQVFAKEQLGPVTGE 1977
            MTSTAI+TCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKAS LELYRVHR+D +       XXXXXXXXXXXXXXXXX                +G+YLELAGTFPLAGNI +LA IP                     DILVVSFG AK+ALVAYD++LGRLET+SIHNFDA AIGPGA GVESGYGLA+ALKDRP TIS++DPAGRCLAAVVAGCQLVVLPARRHVP SVFVSEEA       XXXXXXXXXXXXXXX           V XXXXXXXXXXXXXXX  S  +                        +  + AVSKPFTIDLEEAG+TGFIKAA FLEGFHEPALALLYEPIQTCAGRLASKRSTCRL + SINLTQGRAP +WQV+NLPHDSWDLV VPSP+GG+QVISTNAVMHVNQSEVRSILAVNGYA ATV+PALL CPLR G SDWGW SFRRSH E+EVVDLSSYDVCIELDVV+CAFLT TSMLLSLRTGEVYALRLHLT     +  A G          G PNRVVGQSMRPVGRASPCSVLAV     XXXXXXXXXAS GLVFMGSRVGDSLLV Y+VASAGT+PG  GKGAA           RE K E                        XXXXXXXXXXXXXXXXXXXX                            LAGM+VD ++G+G                  A           +A  D      + T  GGA +   ADG G + S              AATP+KQ   A                                                                AGD+D  QPDKKRSRVS+       +D A S  +  P  +   A AA   GG P     GG+ G+         P  + E+ R A++D                  + DP P                        LYGAR+G+S   GA   G  AA LA LGSK GER+IEAVGFRLKVVDSIC+LGPIVDAALVPSAYHVPKT                              XXXXXXXXXXXGIRTSLVCAAGYG QGSL+VFSAGLRTEVVVELS+ GATGVY++ EG                                    ++R GHTRVLAFEEDA+VVEL +G  GNPFVCDAATADVC MAGGTVVQAH QGLRVTRNR  V DVLAS+DP+ GGLGA+AGV V+RAAAAGSHACCLLSNLRLHLMALDDGDLMP+   EE GEE            GVWE VEAV MFG+Q G  S  E   +R   +GL  +KGWWGG+AWG  G   +        +P   GD GEE      E   +   AY+VVCR+GG+VEVFSCEG GAE TR RPVFRA GAALAP TLWNELLL      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                LAVATG+++ANGRRG+                                          +  P++DPMEVD    +PD+AA      G    A    V   G   G           SVVCPAV DVIVHPVGAV GP ELRRLVLAM+LDNGSLLVYEARM +SP +    REQV CFSKL HDLITRPVKGVPPEAA+ +P RGRALR VRSAAGQEG+CFARPGCRSALGHFVAEKVRLGATVHGL+HLPH LA  GKTGDILK LLR RGHYVALVST EDAL  QPK+GL   EGE GEQ    XXXXX AAGLLDRH V+HK           NWTVADPSLGGAPPLLVP FELRV+AL PG+                             ++  G  SGG+ +             G+V G  AEA L+LS+  VESHPMDS ENG+CMTLVRLEQGG+PRMYVAVGTGMNEPQGEDKAARGRL+L EVDYAYLAREDGKHEHAVKLRQVFAKEQLGPV+GE
Sbjct:    1 MTSTAIYTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASTLELYRVHRDDHSXXXXXXXXXXXXXXXXXXXXXXXXA---------------SGYYLELAGTFPLAGNITALAVIP---------------------DILVVSFGVAKMALVAYDSVLGRLETISIHNFDAGAIGPGAGGVESGYGLAAALKDRPRTISSSDPAGRCLAAVVAGCQLVVLPARRHVPGSVFVSEEAKRXXXXXXXXXXXXXXXXXXXXAAGAGESAAGGVAXXXXXXXXXXXXXXXXXSVSARESDSEGEEDGGLGNGATAKGDGGAGGNLAVSKPFTIDLEEAGITGFIKAAAFLEGFHEPALALLYEPIQTCAGRLASKRSTCRLALLSINLTQGRAPVIWQVENLPHDSWDLVPVPSPIGGLQVISTNAVMHVNQSEVRSILAVNGYARATVDPALLECPLRGGDSDWGWTSFRRSHPEREVVDLSSYDVCIELDVVRCAFLTPTSMLLSLRTGEVYALRLHLTTVTAAAADAAGCSRPPGGAAFGTPNRVVGQSMRPVGRASPCSVLAVAXXX-XXXXXXXXXASKGLVFMGSRVGDSLLVDYSVASAGTRPG--GKGAAVP--------KREPKAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGT-LAGMQVDANVGSGDGSAAMSTRSPGGDGKKVAG----------DADADGKPSEITETSGGGAEI---ADGPGAVTSPPIENGNDGSPDPPAATPTKQEAEALSSSPQPDDGEEAGEGKDAGSRGGSAKRGRAERPSSGGDVG-----------------------AGDNDG-QPDKKRSRVSA---CADGEDDAASSGEAVPATEETTATAAAAVGGAPASTAVGGEEGAEALGDGVAAPTVSSESGRPAAAD-----------------AAIDPTPXXXXXXXXXXXXXXXXXXXXXXXQLYGARIGASASEGADGSGGEAA-LARLGSKDGERVIEAVGFRLKVVDSICTLGPIVDAALVPSAYHVPKTTKLAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIRTSLVCAAGYGGQGSLAVFSAGLRTEVVVELSVPGATGVYSSSEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDTRAGHTRVLAFEEDAKVVELPEGD-GNPFVCDAATADVCSMAGGTVVQAHKQGLRVTRNRDPVQDVLASEDPDLGGLGADAGVTVLRAAAAGSHACCLLSNLRLHLMALDDGDLMPVGSVEEAGEEGEGGG-------GVWEEVEAVCMFGVQKGG-SVGEQSPERYEEEGLPAQKGWWGGSAWGEAGGSGS--------EPTAPGDDGEEAGSSNGEARVEHVRAYVVVCRRGGTVEVFSCEGEGAEETRARPVFRATGAALAPPTLWNELLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----XLAVATGIILANGRRGAAGRGGGKKVDGEANGAG-------------------------TAAPSSDPMEVDDGATAPDSAAVDASASGEAPSAPDETVEKAGADAGXXXXXXXXXXXSVVCPAVTDVIVHPVGAVGGPPELRRLVLAMHLDNGSLLVYEARMVVSPLAAFGGREQVVCFSKLSHDLITRPVKGVPPEAALFDPGRGRALRGVRSAAGQEGVCFARPGCRSALGHFVAEKVRLGATVHGLVHLPHDLAHAGKTGDILKQLLRARGHYVALVSTMEDALVAQPKSGLK--EGEEGEQGDGDXXXXXEAAGLLDRHTVKHK-----------NWTVADPSLGGAPPLLVPRFELRVLALAPGAVSAXXXXXXXXXXXXXXXXXXXXXXXXTPEEGEGRRSGGRGQD------------GSVPGNEAEA-LMLSAAVVESHPMDSDENGVCMTLVRLEQGGAPRMYVAVGTGMNEPQGEDKAARGRLILLEVDYAYLAREDGKHEHAVKLRQVFAKEQLGPVSGE 1880          
BLAST of mRNA_C-linearis_contig78.15350.1 vs. uniprot
Match: D7G8W9_ECTSI (CPSF_A domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8W9_ECTSI)

HSP 1 Score: 480 bits (1236), Expect = 4.290e-152
Identity = 233/245 (95.10%), Postives = 240/245 (97.96%), Query Frame = 0
Query: 2002 TRWDPKSCTLELIGFHDPRVYVISLSVIKDRFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSTEYLIDEPGMAIVVGDGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRRTRGNLRDGARYCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDHGPTSRYETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDIDLASLF 2246
            +RWDPK+CTLELIGFHDPRVYV+SLSVIK +FILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFS EYLIDEPGMAIVV DGRRN+KVLQYAPNATNSRGGTKLLCQSDFYLGSRV KLTRRRTRGNLRDGARYCLLAGTLDGGLGA+LPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDHGPT RYETKQNMLDGSLLWRFVGLDA+TQHDLTRAIGTTVDRVMANLLDIDLASLF
Sbjct:   11 SRWDPKTCTLELIGFHDPRVYVMSLSVIKHKFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSAEYLIDEPGMAIVVADGRRNVKVLQYAPNATNSRGGTKLLCQSDFYLGSRVGKLTRRRTRGNLRDGARYCLLAGTLDGGLGAVLPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDHGPTFRYETKQNMLDGSLLWRFVGLDAKTQHDLTRAIGTTVDRVMANLLDIDLASLF 255          
BLAST of mRNA_C-linearis_contig78.15350.1 vs. uniprot
Match: A0A835Z873_9STRA (Cleavage/polyadenylation specificity factor, A subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z873_9STRA)

HSP 1 Score: 251 bits (640), Expect = 2.340e-71
Identity = 121/268 (45.15%), Postives = 176/268 (65.67%), Query Frame = 0
Query: 1978 SGPVSAVAQLGRHLILSVGKKVIVTRWDPKSCTLELIGFHDPRVYVISLSVIKDRFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSTEYLIDEPGMAIVVGDGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRRTRGNLRDGARYCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDH----GPTSRYETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDID 2241
            +GPV AVAQ+ R++  +    + +  WDPKS +L  +G ++   YV+++SV+K  F+++GD   SVQ ++WR+ED S+  L+KD+E  QV++T +L+D+P + IVVGD   NIK+L+YAP    SRGG +L+C +DF++G+ V     +R R N  +  R+    G LDG +  + P++ER FRRLYALQG+M NAL H    NPR  RLF         +     + +LDG+LLWRFV L A+ Q +LTRAIGTTVD V+ +LLD+D
Sbjct:    3 AGPVGAVAQISRYVATAAAASITILEWDPKSDSLRPVGIYEASQYVVTMSVVKT-FLVLGDVMNSVQFLMWRDEDRSINQLAKDYEPTQVYATVFLVDQPSLGIVVGDSSGNIKILRYAPQLLASRGGHRLVCDADFHIGAPVGAFGPQRLRNNKLNAPRFGAAVGGLDGSVALLAPLEERAFRRLYALQGVMCNALEHGAGVNPRGARLFRSQLPAAAAAEGGRMKGVLDGALLWRFVSLPAQVQCELTRAIGTTVDAVLLSLLDVD 269          
BLAST of mRNA_C-linearis_contig78.15350.1 vs. uniprot
Match: A0A2D4CF34_PYTIN (CPSF_A domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CF34_PYTIN)

HSP 1 Score: 232 bits (592), Expect = 1.350e-63
Identity = 133/348 (38.22%), Postives = 200/348 (57.47%), Query Frame = 0
Query: 1918 YVAVGTGMNEPQGEDKAARGRLLLFEVDYAYLAREDGKHEHAV-KLRQVFAKEQLGPVTGESGPVSAVAQLGRHLILSVGKKVIVTRWDPKSCTLELIGFHDPRVYVISLSVIKDRFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSTEYLIDEPGMAIVVGDGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRRTRGNLRDGAR---------------YCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDHGPTSR---------YETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDI 2240
            YV +GTG   P GED++ +GRLLL+E+DYA     +G+    + KLR +F KE         G +S V+QLG H++ +VG K+IV  ++ KS  L    F+D ++Y++SLSVIKD +++  D Y SV  + WRE+   L  L+KD+E   + +TE+ + E  +A++ GD   N+ V+Q+AP    SRGG +LL  SDF+LG ++  + R+ T  +    A+               Y  L G+ +G +GAI+ V ERVFRRL+ LQ +M N L  N A NPR +R+       R          + K+  LDG +L+RF+ LD   Q +L R IGTT + ++ NLL++
Sbjct:   29 YVVIGTGFVGPHGEDESGKGRLLLYELDYAQYTTAEGETSAKLPKLRLIFIKEH------HHGAISFVSQLGPHVLAAVGMKLIV--YEFKSDQLTACAFYDAQMYIVSLSVIKD-YVMYADVYKSVHFLRWREKQRQLQLLAKDYEPLAITATEFSVAEKKLALLAGDMEENLHVMQFAPQDIESRGGQRLLRTSDFHLGVQITSMIRKATGTSNPPAAQMAGHRKHQEQPSQSQYVTLLGSSEGSVGAIMAVGERVFRRLFTLQNVMINTLPQNCALNPREFRMMKSNGGRRTGRPDAWCKQKWKKGFLDGHVLFRFLHLDYVAQKELARCIGTTPEVIIHNLLEV 367          
BLAST of mRNA_C-linearis_contig78.15350.1 vs. uniprot
Match: A0A662X1P8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X1P8_9STRA)

HSP 1 Score: 236 bits (602), Expect = 1.440e-58
Identity = 140/350 (40.00%), Postives = 209/350 (59.71%), Query Frame = 0
Query: 1916 RMYVAVGTGMNEPQGEDKAARGRLLLFEVDYAYLAREDGKHEHAV--KLRQVFAKEQLGPVTGESGPVSAVAQLGRHLILSVGKKVIVTRWDPKSCTLELIGFHDPRVYVISLSVIKDRFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSTEYLIDEPGMAIVVGDGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRRT-------RGNLRDGAR---YCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDHGPT---------SRYETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDIDLAS 2244
            R Y+ +GTG   P GED++ RGRLLL+E+DYA   +E+G        KLR VF KE         G +S VAQLG +++ +VG K+IV  ++ KS  L    F+D +++++SLSV++D F++ GD + SV  + W+E+   LT L+KD+E   V +TE+ + E  +A++  D   N+ V+Q+AP    SRGG +LL  SDF+LG +VA + R+R        R N R  A    Y  + G  +GG+GA++PV ERVFRRL+ LQ +M N L  N A NPR +R+               S+++ K++ LD  +L+RF+ LD   Q +L R IGTT + V+ NLL++  A+
Sbjct: 1440 RPYLVIGTGCVGPHGEDESGRGRLLLYELDYAQYVKEEGGTTSGKLPKLRLVFIKEH------RQGAISMVAQLGPYVLAAVGSKLIV--YEFKSEQLIGCAFYDAQMFIVSLSVVRD-FVMYGDVFKSVHFLRWKEKQRQLTLLAKDYEPLAVSTTEFNVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRTSDFHLGVQVASMFRKRVDTGGQMVRTNGRASAPPGYYVNVLGNSEGGVGALIPVGERVFRRLFTLQNVMINTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKHKWKKSFLDAFVLFRFLRLDYVAQKELARCIGTTPEVVIHNLLEVQRAT 1780          
BLAST of mRNA_C-linearis_contig78.15350.1 vs. uniprot
Match: A0A833S4Z4_PHYIN (CPSF A subunit region n=2 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833S4Z4_PHYIN)

HSP 1 Score: 236 bits (601), Expect = 1.660e-58
Identity = 142/351 (40.46%), Postives = 206/351 (58.69%), Query Frame = 0
Query: 1916 RMYVAVGTGMNEPQGEDKAARGRLLLFEVDYAYLAREDGKHEHAV--KLRQVFAKEQLGPVTGESGPVSAVAQLGRHLILSVGKKVIVTRWDPKSCTLELIGFHDPRVYVISLSVIKDRFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSTEYLIDEPGMAIVVGDGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRR----------TRG-NLRDGARYCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDHGPT---------SRYETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDIDLAS 2244
            R Y+ VGTG   P GED++ RGRLLL+E+DYA    E+G        KLR VF KE         G +S V+QLG +++ +VG K+IV  ++ KS  L    F+D ++Y+++LSV+KD F++ GD Y SV  + WRE    L  L+KD+E   V +TE+ + E  +A++  D   N+ V+Q+AP    SRGG +LL  SDF+LG +V+ + R+R          T G N    + Y  + GT +GG+GA++PV ERVFRRL+ LQ +M N L  N A NPR +R+               S+ + K++ LD  +L+RF+ LD   Q +L R IGTT + VM NLL++  A+
Sbjct: 1315 RPYLVVGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGATSGKLPKLRLVFIKEH------RQGAISMVSQLGPYVLAAVGSKLIV--YEFKSEQLIGCAFYDAQMYIVTLSVVKD-FVMYGDVYKSVHFLRWREMQRQLVLLAKDYEPLAVSATEFSVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRVSDFHLGVQVSSMFRKRVDASGSVVSATNGRNAAPLSNYVNVMGTSEGGVGALVPVGERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKKKWKKSFLDAFVLFRFLQLDYVAQKELARCIGTTPEVVMHNLLEVQHAT 1656          
BLAST of mRNA_C-linearis_contig78.15350.1 vs. uniprot
Match: D0NYE8_PHYIT (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=D0NYE8_PHYIT)

HSP 1 Score: 236 bits (601), Expect = 1.820e-58
Identity = 142/351 (40.46%), Postives = 206/351 (58.69%), Query Frame = 0
Query: 1916 RMYVAVGTGMNEPQGEDKAARGRLLLFEVDYAYLAREDGKHEHAV--KLRQVFAKEQLGPVTGESGPVSAVAQLGRHLILSVGKKVIVTRWDPKSCTLELIGFHDPRVYVISLSVIKDRFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSTEYLIDEPGMAIVVGDGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRR----------TRG-NLRDGARYCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDHGPT---------SRYETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDIDLAS 2244
            R Y+ VGTG   P GED++ RGRLLL+E+DYA    E+G        KLR VF KE         G +S V+QLG +++ +VG K+IV  ++ KS  L    F+D ++Y+++LSV+KD F++ GD Y SV  + WRE    L  L+KD+E   V +TE+ + E  +A++  D   N+ V+Q+AP    SRGG +LL  SDF+LG +V+ + R+R          T G N    + Y  + GT +GG+GA++PV ERVFRRL+ LQ +M N L  N A NPR +R+               S+ + K++ LD  +L+RF+ LD   Q +L R IGTT + VM NLL++  A+
Sbjct: 1399 RPYLVVGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGATSGKLPKLRLVFIKEH------RQGAISMVSQLGPYVLAAVGSKLIV--YEFKSEQLIGCAFYDAQMYIVTLSVVKD-FVMYGDVYKSVHFLRWREMQRQLVLLAKDYEPLAVSATEFSVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRVSDFHLGVQVSSMFRKRVDASGSVVSATNGRNAAPLSNYVNVMGTSEGGVGALVPVGERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAQRRCGRPDAWSKKKWKKSFLDAFVLFRFLQLDYVAQKELARCIGTTPEVVMHNLLEVQHAT 1740          
BLAST of mRNA_C-linearis_contig78.15350.1 vs. uniprot
Match: A0A2P4X3K7_9STRA (Putative cleavage and polyadenylation specificity factor CPSF (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X3K7_9STRA)

HSP 1 Score: 233 bits (594), Expect = 1.850e-58
Identity = 139/351 (39.60%), Postives = 207/351 (58.97%), Query Frame = 0
Query: 1916 RMYVAVGTGMNEPQGEDKAARGRLLLFEVDYAYLAREDGKHEHAV--KLRQVFAKEQLGPVTGESGPVSAVAQLGRHLILSVGKKVIVTRWDPKSCTLELIGFHDPRVYVISLSVIKDRFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSTEYLIDEPGMAIVVGDGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRR--TRGNLRDGAR---------YCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDHGPT---------SRYETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDIDLAS 2244
            R Y+ +GTG   P GED++ RGRLLL+E+DYA    E+G        KLR VF KE         G +S V+QLG +++ +VG K+IV  ++ KS  L    F+D ++++++L+V+KD F++ GD Y SV  + WRE    L  L+KD+E   V +TE+ + E  +A++  D   N+ VLQ+AP+   SRGG +LL  SDF+LG +VA + R+R  + G++   A          Y  + G  +GG+GA++PV ERVFRRL+ LQ +M N L  N A NPR +R+               S+ + K++ LD  +L+RF+ LD   Q +L R IGTT + VM NLL++  A+
Sbjct:  737 RPYLVIGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGATSGKLPKLRLVFIKEH------RQGAISMVSQLGPYVLAAVGSKLIV--YEFKSEQLIGCAFYDAQMFIVTLNVVKD-FVMYGDVYKSVNFLRWREMQRQLVLLAKDYEPLAVSATEFSVFEKKLALLAVDMDENLHVLQFAPHDIESRGGQRLLRVSDFHLGVQVASMFRKRVDSPGSIAPAANGHAAPPPSCYVNVMGNSEGGVGALIPVGERVFRRLFTLQNVMVNTLHQNCALNPREFRMLKTNAQRRCGRPDAWSKKKWKKSFLDAFVLFRFLHLDYVAQKELARCIGTTPEVVMHNLLEVQHAT 1078          
BLAST of mRNA_C-linearis_contig78.15350.1 vs. uniprot
Match: H3GUH2_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GUH2_PHYRM)

HSP 1 Score: 236 bits (601), Expect = 1.870e-58
Identity = 141/350 (40.29%), Postives = 207/350 (59.14%), Query Frame = 0
Query: 1916 RMYVAVGTGMNEPQGEDKAARGRLLLFEVDYA-YLAREDGKHEHAVKLRQVFAKEQLGPVTGESGPVSAVAQLGRHLILSVGKKVIVTRWDPKSCTLELIGFHDPRVYVISLSVIKDRFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSTEYLIDEPGMAIVVGDGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRRTRG--------NLRDGAR---YCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDHGPT---------SRYETKQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDIDLAS 2244
            R Y+ +GTG   P GED++ RGRLLL+E+DYA Y+  E G      KLR VF KE         G +SAV QLG +++ +VG KVIV  ++ KS  L    F+D ++++++L+V+KD F++ GD Y SV  + WRE+   L  L+KD+E   V +TE+ + E  +A++  D   N+ V+Q+AP    SRGG +LL  SDF+LG +VA + R+R           N R  A    Y  + G+ +GG+GA++PV ERVFRRL+ LQ +M N L  N A NPR +R+               S+ + K++ LD  +L+RF+ LD   Q +L R IGTT + V+ NLL++  A+
Sbjct: 1431 RPYLVIGTGWVGPHGEDESGRGRLLLYELDYAQYVNEEGGASGKLPKLRLVFIKEH------RQGAISAVTQLGPYVLAAVGSKVIV--YEFKSEQLIGCAFYDAQMFIVTLNVVKD-FVMYGDVYKSVHFLRWREKQRQLVLLAKDYEPLAVSTTEFSVFEKKLALLAVDMDENLHVMQFAPQDIESRGGQRLLRVSDFHLGVQVASMFRKRVDAHGPVVPATNGRPSALPSFYVNVMGSSEGGVGALIPVSERVFRRLFTLQNVMVNTLPQNCALNPREFRMLKTNAQQRCGRPDAWSKKKWKKSFLDAFVLFRFLQLDYVAQKELARCIGTTPEVVIHNLLEVQHAT 1771          
BLAST of mRNA_C-linearis_contig78.15350.1 vs. uniprot
Match: A0A5D6Z0P8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Z0P8_9STRA)

HSP 1 Score: 235 bits (599), Expect = 3.310e-58
Identity = 134/340 (39.41%), Postives = 202/340 (59.41%), Query Frame = 0
Query: 1916 RMYVAVGTGMNEPQGEDKAARGRLLLFEVDYAYLAREDGKHEHAV-KLRQVFAKEQLGPVTGESGPVSAVAQLGRHLILSVGKKVIVTRWDPKSCTLELIGFHDPRVYVISLSVIKDRFILVGDAYGSVQLVVWREEDHSLTALSKDHEDCQVFSTEYLIDEPGMAIVVGDGRRNIKVLQYAPNATNSRGGTKLLCQSDFYLGSRVAKLTRRRTRGNLRDG-ARYCLLAGTLDGGLGAILPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLF---DHGPTSRYET------KQNMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDIDLAS 2244
            R YV VGTG   P GED++ RGRLLL+E+DYA      G     + KLR +F K+         G +S VAQLG ++I +VG K+IV  ++ KS  L    F+D +++++S+S++KD F++ GD Y S   + W+E+   L  L+KD+E   V +TE+ + E  +A++  D   N+ V+QYAPN   SRGG +LL   DF+LG +V+ + R+R    +R     Y  + G+ +G + A++PV ERVFRRL+ LQ +M N L  N A NPR +R      H  + R +       K++ LD  +L+RF+ LD   Q ++TR IGTT + V+ NLL++  A+
Sbjct: 1473 RPYVVVGTGYVGPHGEDESGRGRLLLYELDYAQYVNHSGSTSGKLPKLRLIFVKDH------RQGAISMVAQLGPYVIAAVGSKLIV--YEFKSEQLIGCAFYDAQMFIVSISIVKD-FVMYGDVYKSAHFLRWKEKQRQLVLLAKDYEPLAVSTTEFNLFEKRLALLAVDVEENLHVMQYAPNDIESRGGQRLLRTGDFHLGVQVSSMFRKRITPAIRSAPVAYVNILGSSEGSISALIPVGERVFRRLFTLQNVMINTLPQNCALNPREFRAMKANSHRHSGRPDAWSKQKWKKSFLDAQVLFRFLQLDYVAQKEITRCIGTTPEVVVHNLLEVQRAT 1803          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig78.15350.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8W8_ECTSI0.000e+056.71Cleavage and polyadenylation specificity factor CG... [more]
D7G8W9_ECTSI4.290e-15295.10CPSF_A domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A835Z873_9STRA2.340e-7145.15Cleavage/polyadenylation specificity factor, A sub... [more]
A0A2D4CF34_PYTIN1.350e-6338.22CPSF_A domain-containing protein n=1 Tax=Pythium i... [more]
A0A662X1P8_9STRA1.440e-5840.00Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A833S4Z4_PHYIN1.660e-5840.46CPSF A subunit region n=2 Tax=Phytophthora infesta... [more]
D0NYE8_PHYIT1.820e-5840.46Uncharacterized protein n=18 Tax=Phytophthora TaxI... [more]
A0A2P4X3K7_9STRA1.850e-5839.60Putative cleavage and polyadenylation specificity ... [more]
H3GUH2_PHYRM1.870e-5840.29Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A5D6Z0P8_9STRA3.310e-5839.41Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1143..1387
e-value: 1.3E-6
score: 29.8
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 1832..2153
e-value: 3.0E-52
score: 179.9
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 311..596
e-value: 2.8E-16
score: 61.1
NoneNo IPR availablePFAMPF10433MMS1_Ncoord: 1010..1244
e-value: 2.8E-7
score: 29.5
NoneNo IPR availablePANTHERPTHR10644DNA REPAIR/RNA PROCESSING CPSF FAMILYcoord: 9..600
coord: 992..2224
NoneNo IPR availablePANTHERPTHR10644:SF2CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 1coord: 992..2224
coord: 9..600
IPR004871Cleavage/polyadenylation specificity factor, A subunit, C-terminalPFAMPF03178CPSF_Acoord: 1887..2211
e-value: 1.7E-56
score: 191.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig78contigC-linearis_contig78:236426..254008 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig78.15350.1mRNA_C-linearis_contig78.15350.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig78 235843..254008 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig78.15350.1 ID=prot_C-linearis_contig78.15350.1|Name=mRNA_C-linearis_contig78.15350.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=2247bp
MTSTAIFTCYRQLHPPTGVDHAVFGSVTAAGSRDLVVAKASILELYRVHR
NDPNENATAPAAAAAAAAAAGGDVDGSSTAVGGGGNNDDDDDDDTGFYLE
LAGTFPLAGNIASLATIPVAGTAATAASSTSPPPPQQQPDILVVSFGDAK
LALVAYDALLGRLETVSIHNFDAAAIGPGAAGVESGYGLASALKDRPATI
SAADPAGRCLAAVVAGCQLVVLPARRHVPRSVFVSEEAAERRRVVRVRRR
RAAVAAAAAAAAAGRRGVAGGDGSDGGGGGGGGGEASGESGSEEEEEEEE
DEGEGGGNGGNGNVSRAHAAVSKPFTIDLEEAGVTGFIKAATFLEGFHEP
ALALLYEPIQTCAGRLASKRSTCRLVVFSINLTQGRAPSVWQVDNLPHDS
WDLVAVPSPVGGVQVISTNAVMHVNQSEVRSILAVNGYAGATVEPALLGC
PLRRGHSDWGWASFRRSHSEQEVVDLSSYDVCIELDVVKCAFLTATSMLL
SLRTGEVYALRLHLTAAVPPSVRAGGGRGAPNRVVGQSMRPVGRASPCSV
LAVDRVGGGGGGGGGGGASTGLVFMGSRVGDSLLVKYAVASAGTQPGKRG
KGAAGVGTAGAAGLTRELKVEAEKEKEEWGGDGRERGSANGVVGGGEKAA
AAAAAAASATAAAAAEGEALSDEPSAGVGRAAAVEEDPKEAAGLAGMEVD
NSLGNGGGSGGGSSGGTPGGGSAAADPSVASDDASKEAATDTPAPRTSAT
EAGGAPVVPAADGYGIIDSGVAAATPSKQPETAQKEGEGDSRSAGDSGGS
GGGSGSSSSSSSGKRGRGERSPSPGEGEREGEGTGNGGGGDGEGTGVAGD
HDSKQPDKKRSRVSSSAAAGRNDDAAVSPADIAPPPDAAAAGIQGGVPPA
AEGGDRGSGPPYAVEAKRAASSDEKGAVAEAVDAMDTTSPRSADPAPATP
AAGTTRLIREELEMIHEEEDLYGARLGSSLGARTRGSRAAPLANLGSKVG
ERIIEAVGFRLKVVDSICSLGPIVDAALVPSAYHVPKTDVPGSGHRAAPA
GGGGGGGATSGGGIRTSLVCAAGYGRQGSLSVFSAGLRTEVVVELSMRGA
TGVYTAPEGGGRPSGGRNRDTLVLVSCSSPPSPQAPLAADAGDESRPGHT
RVLAFEEDARVVELADGTTGNPFVCDAATADVCVMAGGTVVQAHAQGLRV
TRNRAAVFDVLASDDPEFGGLGAEAGVPVVRAAAAGSHACCLLSNLRLHL
MALDDGDLMPLLPAEEGEEEGGGEGAGSGAGGVWEGVEAVFMFGIQVGAV
SEAETQQQRGRRQGLEKGWWGGAAWGGTGSKSASAEVADATKPPLSGDQG
EEEEVEDTTSAYLVVCRKGGSVEVFSCEGRGAEGTRTRPVFRAAGAALAP
STLWNELLLPPVAAEAAAATSSEEEEEEEDGDGSESLANGGGAGGGRSPV
IDGEGEDGGVGALAVATGVVVANGRRGSAAAAAGRGAGGGVGAGAEGENR
ANGSSAGAAGGGAGKGKGPTSPVPAADPMEVDGASPDAAAAAGGAEGGDK
RALAVLTGGGKEGEEDSVVCPAVVDVIVHPVGAVDGPAELRRLVLAMYLD
NGSLLVYEARMCISPSSLSLRREQVTCFSKLCHDLITRPVKGVPPEAAVP
NPARGRALRAVRSAAGQEGICFARPGCRSALGHFVAEKVRLGATVHGLIH
LPHQLAQPGKTGDILKHLLRGRGHYVALVSTTEDALAEQPKTGLSKGEGE
GGEQGDGDDDEEEEAAGLLDRHIVRHKASINRCSTAINNWTVADPSLGGA
PPLLVPSFELRVVALTPGSTPPANSGNAATSPLEPTSSSTTEADHDDKSG
GSSGGKAEGEGAGTGAGARGAGNVSGQAAEAALLLSSEAVESHPMDSGEN
GICMTLVRLEQGGSPRMYVAVGTGMNEPQGEDKAARGRLLLFEVDYAYLA
REDGKHEHAVKLRQVFAKEQLGPVTGESGPVSAVAQLGRHLILSVGKKVI
VTRWDPKSCTLELIGFHDPRVYVISLSVIKDRFILVGDAYGSVQLVVWRE
EDHSLTALSKDHEDCQVFSTEYLIDEPGMAIVVGDGRRNIKVLQYAPNAT
NSRGGTKLLCQSDFYLGSRVAKLTRRRTRGNLRDGARYCLLAGTLDGGLG
AILPVDERVFRRLYALQGIMSNALGHNGAANPRAYRLFDHGPTSRYETKQ
NMLDGSLLWRFVGLDARTQHDLTRAIGTTVDRVMANLLDIDLASLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR004871Cleavage/polyA-sp_fac_asu_C