prot_C-linearis_contig78.15345.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig78.15345.1
Unique Nameprot_C-linearis_contig78.15345.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length445
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig78.15345.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 163..388
e-value: 1.7E-5
score: 25.5
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 6..159
e-value: 7.0E-7
score: 30.0
IPR008615FNIPPFAMPF05725FNIPcoord: 105..148
e-value: 2.0E-6
score: 27.9
coord: 199..241
e-value: 2.5E-6
score: 27.6
coord: 61..103
e-value: 7.1E-6
score: 26.1
coord: 350..392
e-value: 2.4E-7
score: 30.8
coord: 155..198
e-value: 2.3E-4
score: 21.2
coord: 306..346
e-value: 2.5E-6
score: 27.6
NoneNo IPR availablePANTHERPTHR32134UNCHARACTERIZEDcoord: 7..247
coord: 230..410
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 26..366

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig78contigC-linearis_contig78:200831..202165 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig78.15345.1mRNA_C-linearis_contig78.15345.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig78 200703..206414 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig78.15345.1 ID=prot_C-linearis_contig78.15345.1|Name=mRNA_C-linearis_contig78.15345.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=445bp
MELWKGSLERISFGDGFSGCIAGVVWPASLQQLSFRYNFNRPIDGVVWPA
SLQQLSFGLRFNQPITGVVWPASLQQLSLGFKFNQSITGVVWPPSLQQLS
LGFKFNQPIDGVVWPASLQNLWFGPYFNRSIVGVVWPPSLQQLSFGNKLS
NVDKFNQPIAGVTWPASMQQVSFALSFNQPITGVVWPASLQKLSFGNKFN
QSIVGVVWPPSLQQLSFEGNFNQLIAGVVWPASLQKLSFSDSFNQPIVGV
VWPIALQELTLGNQSIVGVVWPASLQKLAFSGFHNLPITEVVWPASLKYL
RFGSRFNQPIAGVTWPASLQWLWFGERFNQPITSVVWPASLKFLLFAWDF
NQSITGVVWPASLQNLAFGEEFNQPITGVVWPASLQQLAFGKGFKQPVAG
VVWPASLRSVARSDEKYEEINLLCHVLRPCVGLATVDSSQQFDK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf
IPR008615FNIP