prot_C-linearis_contig78.15339.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig78.15339.1
Unique Nameprot_C-linearis_contig78.15339.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length354
Homology
BLAST of mRNA_C-linearis_contig78.15339.1 vs. uniprot
Match: A0A6H5JEJ0_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEJ0_9PHAE)

HSP 1 Score: 294 bits (753), Expect = 2.340e-90
Identity = 153/234 (65.38%), Postives = 167/234 (71.37%), Query Frame = 0
Query:    1 MYRLITDRVKPLQLGGPGRQEVRNMVANVQRELFCLPTDALDLVSELKDTAGCYVKYDTDELRRLKHVFWSTGQQQVSARQWGGIVLQDNTALTNR------------------------------------YGMRFMLFVGVDSENRAVVFAQGFFSDQSSDTHMWALEQYCKICGGHPEVIITDADGGMTLAVEQYLPGT-VHLHCLWHVMKNVRKDCQGPLGVKANRFFKL 197
            MYRLI++ VKPLQLG PGRQ+V       QRE +  PTDALDLVSELKD AGCYVKYDTD L RLKHVFWSTGQQQV ARQWGGIVLQDNTALTNR                                    YGM FMLF+GVDSEN+ VVFAQGFFSDQSSDT+ WAL+ YC ICGG PEVIITDAD GMT AVE +LP T VHL+CLWHVMKNVRK+C   LG KA+RF++L
Sbjct:   28 MYRLISELVKPLQLGEPGRQKV-------QRECWSTPTDALDLVSELKDMAGCYVKYDTDGLHRLKHVFWSTGQQQVFARQWGGIVLQDNTALTNRVLVLIRLIFATGKMSDEHPVRLRFIQPRAFASRSCRYGMHFMLFIGVDSENKTVVFAQGFFSDQSSDTYQWALKHYCTICGGQPEVIITDADAGMTHAVETFLPSTTVHLYCLWHVMKNVRKNCARALGKKASRFYRL 254          
BLAST of mRNA_C-linearis_contig78.15339.1 vs. uniprot
Match: D7FLF6_ECTSI (Putative far-red impaired response protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLF6_ECTSI)

HSP 1 Score: 171 bits (434), Expect = 1.110e-44
Identity = 86/185 (46.49%), Postives = 122/185 (65.95%), Query Frame = 0
Query:    1 MYRLITDRVKPLQLGGPGRQEVRNMVANVQRELFCLPTDALDLVSELKDTAGCYVKYDTDELRRLKHVFWSTGQQQVSARQWGGIVLQDNTALTNRYGMRFMLFVGVDSENRAVVFAQGFFSDQSSDTHMWALEQYCKICGGHPEVIITDADGGMTLAVEQYLPG--TVHLHCLWHVMKNVRKDC 183
            MYR I + +KP +LG  G ++VRNM   V  EL+    DAL+LV+EL +     VK++ D    L+ + W++ +Q + AR +GG+V+QDNT LTNRY  +  LFVGVDSEN+  VFAQGFFS++S++   +A + +  ICGGHP+VIITD+D  M  ++    P   T HL C WH+ KN++K C
Sbjct:    1 MYRCIAESIKPQKLGPRGARKVRNMSRKVTGELWASSGDALELVAEL-ERGNETVKWELDAENILRSIMWASPEQILLARTYGGVVIQDNTCLTNRYNNKLCLFVGVDSENKTQVFAQGFFSNESTEAFDFANKFFLDICGGHPKVIITDSDAAMKESIRGVFPPPHTTHLLCSWHICKNIKKKC 184          
BLAST of mRNA_C-linearis_contig78.15339.1 vs. uniprot
Match: A0A6H5K454_9PHAE (SWIM-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K454_9PHAE)

HSP 1 Score: 150 bits (380), Expect = 1.560e-36
Identity = 81/201 (40.30%), Postives = 120/201 (59.70%), Query Frame = 0
Query:    1 MYRLITDRVKPLQLGGPGRQEVRNMVANVQRELFCLPTDALDLVSELKDTAGCYVKYDTDELRRLKHVFWSTGQQQVSARQWGGIVLQDNTALTNRYGMRFMLFVGVDSENRAVVFAQGFFSDQSSDTHMWALEQYCKICGGH--------------PEVIITDADGGMTLAVEQYLPGTVHLHCLWHVMKNVRKDCQGPL 187
            MYR I + +KP +LG  G ++VRNM   V R  +   TDAL+LV++L +     VK+++D    L+ + W++ +Q + AR +GGIV+QDNT L NRY  +  LFVGVDSEN+  +FAQG  S++   +  +A     +I GG               P+VIITDAD  MT +V + +P T HL+  WH+ KN+++ C G +
Sbjct:  774 MYRCIGENIKPRKLGTRGVRKVRNMSDKVSRGRWASKTDALELVADL-ERGPATVKWESDANHVLRSIMWASPEQIMLARTYGGIVIQDNTCLINRYDFKLCLFVGVDSENKTGIFAQGLLSNEQISSFDFANRFLLEIRGGTQSHHLLPTPPTPHPPQVIITDADAAMTSSVAELMPHTKHLYSSWHISKNLKRKCGGEV 973          
BLAST of mRNA_C-linearis_contig78.15339.1 vs. uniprot
Match: A0A6H5L618_9PHAE (MULE domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L618_9PHAE)

HSP 1 Score: 123 bits (308), Expect = 3.890e-27
Identity = 59/167 (35.33%), Postives = 96/167 (57.49%), Query Frame = 0
Query:   18 GRQEVRNMVANVQRELFCLPTDALDLVSELKDTAGCYVKYDTDELRRLKHVFWSTGQQQVSARQWGGIVLQDNTALTNRYGMRFMLFVGVDSENRAVVFAQGFFSDQSSDTHMWALEQYCKICGGH-PEVIITDADGGMTLAVEQYLPGTVHLHCLWHVMKNVRKDC 183
            G+++V N +A ++  L+  P DA + ++ L+   G +V+ + D + RL++VFW+T  QQ    ++G  +  D T   NRYG   +  VGVD ENR+ + AQ     + ++T  W L  +    G   P+V +TD +  MT A+  +   T+HL+CLWH+ KNV K+C
Sbjct:   12 GKKKVYNAMAAIKDHLYSSPEDAANFLATLQSEPGMFVEREFDSIGRLENVFWATVDQQNKIARYGACIQMDTTVFMNRYGCPLLFIVGVDDENRSCILAQCLLRSECTETFKWILTSWDGASGDRRPKVFLTDGEKAMTAALRGWKT-TLHLYCLWHIFKNVLKNC 177          
BLAST of mRNA_C-linearis_contig78.15339.1 vs. uniprot
Match: A0A2I4FHD7_JUGRE (Protein FAR1-RELATED SEQUENCE n=1 Tax=Juglans regia TaxID=51240 RepID=A0A2I4FHD7_JUGRE)

HSP 1 Score: 109 bits (273), Expect = 3.200e-23
Identity = 59/174 (33.91%), Postives = 86/174 (49.43%), Query Frame = 0
Query:    7 DRVKPLQLGGPGRQEVRNMVANVQRELFCLPTDALDLVSELKDTAGCYVKYDTDELRRLKHVFWSTGQQQVSARQWGGIVLQDNTALTNRYGMRFMLFVGVDSENRAVVFAQGFFSDQSSDTHMWALEQYCKICGGH-PEVIITDADGGMTLAVEQYLPGTVHLHCLWHVMKNV 179
            D+ + L+LG  G   +R     +Q +                   G Y   D D+  RLK+VFW+ G+ + +   +G +V  D T LTNRYGM F  FVGV+   +++ F  G  S +++DT  W  E + K   G  P  IITD D  M  A+    P T H +CLWH+M+ +
Sbjct:   30 DKARVLRLGKGGADALRQYFERMQYK-----------------NDGFYSSMDIDDEGRLKNVFWADGRSRAAYGYFGDVVTFDTTYLTNRYGMSFAPFVGVNHHGQSIFFGAGLISSENTDTFFWLFETWLKCIDGRAPNAIITDQDRAMKNAIAIVFPNTRHKYCLWHIMRKL 186          
BLAST of mRNA_C-linearis_contig78.15339.1 vs. uniprot
Match: UPI001C262D31 (protein FAR1-RELATED SEQUENCE 5-like n=2 Tax=Salvia splendens TaxID=180675 RepID=UPI001C262D31)

HSP 1 Score: 108 bits (271), Expect = 4.420e-23
Identity = 56/173 (32.37%), Postives = 99/173 (57.23%), Query Frame = 0
Query:   12 LQLGGPG-----RQEVRNMVANVQRELFCLPTDALD--LVSELKDTAGCYVKYDTDELRRLKHVFWSTGQQQVSARQWGGIVLQDNTALTNRYGMRFMLFVGVDSENRAVVFAQGFFSDQSSDTHMWALEQYCKICGGH-PEVIITDADGGMTLAVEQYLPGTVHLHCLWHVM 176
            ++ GGP       +++RN+  +++ E   +  + L     SE +  +  +  Y+TD   R K  FW+  + + +   +G +V+ D+T  TN+YGM F  FVGV+  ++ ++F  GF SD+ +++++W L ++ +      P+ IITD D  MT A+ Q LP TVH +CLWH++
Sbjct:  166 IEHGGPESVGCTERDIRNLERDMRDEQKGINAETLVEFFTSEKEKNSSFFFDYETDSDNRFKRCFWADHKSRSAYNVFGDVVVFDSTYNTNKYGMIFTPFVGVNHHHQTIMFGCGFLSDEKTESYLWLLNKFMEAMPTRAPKAIITDQDPAMTKALAQVLPKTVHRYCLWHIL 338          
BLAST of mRNA_C-linearis_contig78.15339.1 vs. uniprot
Match: UPI002009AAF1 (protein FAR1-RELATED SEQUENCE 5-like n=2 Tax=Salvia hispanica TaxID=49212 RepID=UPI002009AAF1)

HSP 1 Score: 109 bits (273), Expect = 1.310e-22
Identity = 57/173 (32.95%), Postives = 99/173 (57.23%), Query Frame = 0
Query:   12 LQLGGPG-----RQEVRNMVANVQRELFCLPTDALD--LVSELKDTAGCYVKYDTDELRRLKHVFWSTGQQQVSARQWGGIVLQDNTALTNRYGMRFMLFVGVDSENRAVVFAQGFFSDQSSDTHMWALEQYCKICG-GHPEVIITDADGGMTLAVEQYLPGTVHLHCLWHVM 176
            ++ GGP       +++RN+  +++ E   +  + L     SE +  +  +  Y+ D   R K  FW+  + + +   +G +V+ D+T  TN+YGM F  FVGV+  ++ +VF  GF SD+ +++++W L ++ +    G P+ IITD D  MT A+ Q LP TVH +CLWH++
Sbjct:  168 IEHGGPESVGCTERDIRNLERDMRDEQKGIDAETLVEFFTSEKEKNSSFFFDYEIDSDNRFKRCFWADHKSRSAYSIFGDVVVFDSTYNTNKYGMIFTPFVGVNHHHQTIVFGCGFLSDEKTESYLWLLNKFMEAMPTGAPKAIITDQDPSMTKALAQVLPQTVHRYCLWHIL 340          
BLAST of mRNA_C-linearis_contig78.15339.1 vs. uniprot
Match: UPI001C725227 (protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C725227)

HSP 1 Score: 105 bits (262), Expect = 6.700e-22
Identity = 56/157 (35.67%), Postives = 86/157 (54.78%), Query Frame = 0
Query:   52 GCYVKYDTDELRRLKHVFWSTGQQQVSARQWGGIVLQDNTALTNRYGMRFMLFVGVDSENRAVVFAQGFFSDQSSDTHMWALEQYCKICGGH-PEVIITDADGGMTLAVEQYLPGTVHLHCLWHVMKNVRKDCQGPLGVKANRFFKL---SRLRRCV 204
            G Y   D D+  RLK+VFW+  + +V+   +G +V  D   LTNRYGM F  FVGV+   ++++   G  S ++++T +W  + + K   G  P+ IITD D  M  A+    P T H +CLWH+M+ +      P  + ++  FK    S L+RCV
Sbjct:  157 GFYSSMDLDDDGRLKNVFWADARSRVAYESFGDVVTFDTIYLTNRYGMSFAPFVGVNHHGQSILLGAGLISSENTETFVWLFDTWLKCMDGRAPKAIITDQDRAMKNAIAIVFPNTRHRYCLWHIMRKL------PEKLSSHAEFKCGLKSALQRCV 307          
BLAST of mRNA_C-linearis_contig78.15339.1 vs. uniprot
Match: UPI001C4C14AC (protein FAR1-RELATED SEQUENCE 5-like n=2 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4C14AC)

HSP 1 Score: 106 bits (264), Expect = 1.480e-21
Identity = 60/191 (31.41%), Postives = 99/191 (51.83%), Query Frame = 0
Query:    8 RVKPLQLGGPG-----RQEVRNMVANVQRELFCLPTDALD--LVSELKDTAGCYVKYDTDELRRLKHVFWSTGQQQVSARQWGGIVLQDNTALTNRYGMRFMLFVGVDSENRAVVFAQGFFSDQSSDTHMWALEQYCKICG-GHPEVIITDADGGMTLAVEQYLPGTVHLHCLWHVMKNVRKDCQGPLGVK 190
            R+  ++ GGP       +++RN    ++ E   +  + L     SE +  +  +  Y+TD        FW+    + +   +G +V+ D T  TN+YG+ F  FVGV+  ++ +VF  GF SD+ +++ +W L ++ +    G P VIITD D  MT A+ Q  P TVH +CLWH++ N   D   PL  +
Sbjct:  143 RLLEIEYGGPELVGCTERDIRNFEKQLRDERKGIDAETLIELFASEKEKNSAFFFDYETDSDNIFSRCFWADHVSRTAYNVFGDVVVFDTTYNTNKYGLIFAPFVGVNHHHQTIVFGCGFISDEKTESFVWLLNKFIEAMPKGAPNVIITDQDPAMTKAIAQVFPQTVHRYCLWHIL-NKFPDKLDPLTFR 332          
BLAST of mRNA_C-linearis_contig78.15339.1 vs. uniprot
Match: UPI002009766B (protein FAR1-RELATED SEQUENCE 5-like n=2 Tax=Salvia TaxID=21880 RepID=UPI002009766B)

HSP 1 Score: 105 bits (263), Expect = 1.530e-21
Identity = 56/173 (32.37%), Postives = 99/173 (57.23%), Query Frame = 0
Query:   12 LQLGGPG-----RQEVRNMVANVQRELFCLPTDALD--LVSELKDTAGCYVKYDTDELRRLKHVFWSTGQQQVSARQWGGIVLQDNTALTNRYGMRFMLFVGVDSENRAVVFAQGFFSDQSSDTHMWALEQYCKICG-GHPEVIITDADGGMTLAVEQYLPGTVHLHCLWHVM 176
            ++ GGP       +++RN+  +++ E   +  + L     SE +  +  +  Y+ D   R K  F++  + + +   +G +V+ D+T  TN+YGM F  FVGV+  ++ +VF  GF SD+ +++++W L ++ +    G P+ IITD D  MT A+ Q LP TVH +CLWH++
Sbjct:  168 IEHGGPESVGCTERDIRNLERDMRDEQKGIDAETLVEFFTSEKEKNSSFFFDYEIDSDNRFKRCFFADHKSRSAYSIFGDVVVFDSTYNTNKYGMIFTPFVGVNHHHQTIVFGCGFLSDEKTESYLWLLNKFMEAMPTGAPKAIITDQDPSMTKALAQVLPQTVHRYCLWHIL 340          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig78.15339.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JEJ0_9PHAE2.340e-9065.38SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
D7FLF6_ECTSI1.110e-4446.49Putative far-red impaired response protein n=1 Tax... [more]
A0A6H5K454_9PHAE1.560e-3640.30SWIM-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L618_9PHAE3.890e-2735.33MULE domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A2I4FHD7_JUGRE3.200e-2333.91Protein FAR1-RELATED SEQUENCE n=1 Tax=Juglans regi... [more]
UPI001C262D314.420e-2332.37protein FAR1-RELATED SEQUENCE 5-like n=2 Tax=Salvi... [more]
UPI002009AAF11.310e-2232.95protein FAR1-RELATED SEQUENCE 5-like n=2 Tax=Salvi... [more]
UPI001C7252276.700e-2235.67protein FAR1-RELATED SEQUENCE 5-like n=1 Tax=Carya... [more]
UPI001C4C14AC1.480e-2131.41protein FAR1-RELATED SEQUENCE 5-like n=2 Tax=Zingi... [more]
UPI002009766B1.530e-2132.37protein FAR1-RELATED SEQUENCE 5-like n=2 Tax=Salvi... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018289MULE transposase domainPFAMPF10551MULEcoord: 86..178
e-value: 2.4E-20
score: 72.7
NoneNo IPR availablePANTHERPTHR31669:SF196coord: 54..185
IPR031052FHY3/FAR1 familyPANTHERPTHR31669FAMILY NOT NAMEDcoord: 54..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig78contigC-linearis_contig78:137325..139841 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig78.15339.1mRNA_C-linearis_contig78.15339.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig78 136766..143119 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig78.15339.1 ID=prot_C-linearis_contig78.15339.1|Name=mRNA_C-linearis_contig78.15339.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=354bp
MYRLITDRVKPLQLGGPGRQEVRNMVANVQRELFCLPTDALDLVSELKDT
AGCYVKYDTDELRRLKHVFWSTGQQQVSARQWGGIVLQDNTALTNRYGMR
FMLFVGVDSENRAVVFAQGFFSDQSSDTHMWALEQYCKICGGHPEVIITD
ADGGMTLAVEQYLPGTVHLHCLWHVMKNVRKDCQGPLGVKANRFFKLSRL
RRCVRYYRGCMLGRVDRDKESHQGRWRQMRRLHHWPPDEVPQVLVSLLLP
EDHDAQHDSDTEGGGDVQCVEERAVCEPPLFSSLGEVRAGETNRRTLCGV
EPAQLKGLQPWQEAHRRPRIEDCRACLRPTASCWSQHICQSGDGGRDACE
SCL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018289MULE_transposase_dom
IPR031052FHY3/FAR1