prot_C-linearis_contig77.15332.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig77.15332.1
Unique Nameprot_C-linearis_contig77.15332.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length111
Homology
[Close]
BLAST of mRNA_C-linearis_contig77.15332.1 vs. uniprot
Match: A0A6H5KRS2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS2_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 7.680e-8
Identity = 23/29 (79.31%), Postives = 25/29 (86.21%), Query Frame = 0 
Query:   83 QICCPTKKVCEIPLDDDVTACGDPHMTGF 111
            +ICCP KKVCE+PL  D TACGDPHMTGF
Sbjct:   35 EICCPVKKVCELPLPTDPTACGDPHMTGF 63
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig77.15332.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KRS2_9PHAE7.680e-879.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig77contigC-linearis_contig77:861241..864457 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig77.15332.1mRNA_C-linearis_contig77.15332.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig77 861241..864459 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig77.15332.1 ID=prot_C-linearis_contig77.15332.1|Name=mRNA_C-linearis_contig77.15332.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=111bp
STGISGLSTTLNSGIEVCCDPGCTQCGGRMCSSSSPGLSVEDCCTSRIVD
SGLVCGQDAGTVEAPCMIATECLIDTDCLLDGQICCPTKKVCEIPLDDDV
TACGDPHMTGF
back to top