prot_C-linearis_contig76.15249.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig76.15249.1
Unique Nameprot_C-linearis_contig76.15249.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length437
Homology
BLAST of mRNA_C-linearis_contig76.15249.1 vs. uniprot
Match: A0A6H5JWY7_9PHAE (Radical SAM core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JWY7_9PHAE)

HSP 1 Score: 594 bits (1531), Expect = 4.350e-210
Identity = 318/420 (75.71%), Postives = 354/420 (84.29%), Query Frame = 0
Query:   10 WTSAVMATLAVGSSESFLLAPSKAPFYGHSAA--RAASTXXXXXXXXXXXXXXXGASAAFVPTPVAPQRISGGELLSLDFDDLAKLLKGSGRAKMVWAALSQGVDPFSEAATELEFLTPKTAAVLRENVQDLPWQVTRESVSSCGTRKLLVRLEDGLDVETVVIPDLTGSRLSTVCVSSQIGCAENCQFCMTGKMGLVRNLTAGEILGQVFFARGTARKHGMPPLTNVVYMGMGEPLDNPAAVTRSLGLLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPSRLAWSVHAATDDVRRVLVPTTVHTMIELRDAFAEVLESRPREHLFVEIVLIQGMNDSPELARALASLLRPLPRRASINLLPYNDAGHPVFRASSSEAVEEFQRVLNEEGFIATIRTARGDEESSACGQLATSAKNER 427
            W+SA ++ + V SSESFLL  S A     +AA  +A +T                A  A  P P AP+ + GG+LLSL+FD+L+++L GSGRAKMVW+ALS GVDPF +AA   EFLT KTAAVL++ V+ LPWQV RESVSSCGTRKLLV+LEDGL+VETVVIPDL+GSR STVCVSSQIGCA+NCQFCMTGKMGLVRNLTAGEILGQVFFAR T R+HGMPPLTN VYMGMGEPLDNP AVT+SL +LTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPSRLAWSVHAATDDVRR+LVPTTVHTM ELRDAF EVL+SR REHLFVE+VLI+GMNDSPELARALASLLRPLP RA INLLPYND GHP FRAS  E+VEEFQRVL +EGF+ATIRTARGDEESSACGQLAT+A +ER
Sbjct:    5 WSSAFVSAMMVSSSESFLLYSSTAGTRSTTAAAPKAGATAV--------------AHTAHPPAP-APKPVPGGDLLSLNFDELSQILGGSGRAKMVWSALSAGVDPFGDAA---EFLTDKTAAVLKDTVERLPWQVVRESVSSCGTRKLLVQLEDGLEVETVVIPDLSGSR-STVCVSSQIGCAKNCQFCMTGKMGLVRNLTAGEILGQVFFARETVREHGMPPLTNAVYMGMGEPLDNPGAVTQSLQVLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPSRLAWSVHAATDDVRRLLVPTTVHTMAELRDAFGEVLQSRRREHLFVEVVLIKGMNDSPELARALASLLRPLPIRAGINLLPYNDTGHPFFRASPKESVEEFQRVLTQEGFVATIRTARGDEESSACGQLATTANSER 405          
BLAST of mRNA_C-linearis_contig76.15249.1 vs. uniprot
Match: A0A835Z3N5_9STRA (Radical SAM core domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3N5_9STRA)

HSP 1 Score: 363 bits (933), Expect = 1.450e-120
Identity = 193/337 (57.27%), Postives = 241/337 (71.51%), Query Frame = 0
Query:   89 DLAKLLKGSGRAKMVWAALSQGVDPFSEAATELEFLTPKTAAVLRE----NVQDLPWQVTRESVSSCGTRKLLVRLEDGLDVETVVIPDLTGSRLSTVCVSSQIGCAENCQFCMTGKMGLVRNLTAGEILGQVFFARGTARKHGMPPLTNVVYMGMGEPLDNPAAVTRSLGLLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPSRLAWSVHAATDDVRRVLVPTTVHTMIELRDAFAEVLESRPREHLFVEIVLIQGMNDSPELARALASLLRPLPRRASINLLPYNDAGHPVFRASSSEAVEEFQRVLNEEGFIATIRTARGDEESSACGQLAT 421
            +LA  L G GR + +W ALSQG  P      E + +    A  +RE    N     W+VT+ES+++CGTRKLL+R+EDG ++ETV+IP   GSR +TVCVSSQ+GC   C FC TG+MG +RNL+A EIL QVF+AR  AR   MPPL N+V+MGMGEPL+N  AV  +L  LT    FA  +S ISVSTVGP+P AIR+M  MP+RLAWSVHAATDDVR+ LVPTT HTM ELRDAFAEVL  R +EHLFVE+ ++ G+NDSP+ A+A+  LL  LP R  +NLLPYND GH  +R SS E +EEFQR+L   G +AT+R+ RG  E++ACGQLAT
Sbjct:    3 ELAHHLSGLGRGRALWKALSQGYFP-----AEADHIIG--AGGMREAKHKNWGSFGWEVTKESLANCGTRKLLLRMEDGAEIETVLIPSFDGSR-TTVCVSSQVGCNRACSFCATGRMGFIRNLSADEILAQVFYARRAARLAEMPPLDNIVFMGMGEPLNNAQAVKLALRQLTDGNMFAFGRSHISVSTVGPTPNAIRQMVDMPARLAWSVHAATDDVRKQLVPTTAHTMEELRDAFAEVLLHRGKEHLFVEVTMLDGINDSPDHAQAMVQLLSTLPGRTRVNLLPYNDIGHLSYRPSSPETIEEFQRILQAGGLVATVRSTRGAGEAAACGQLAT 331          
BLAST of mRNA_C-linearis_contig76.15249.1 vs. uniprot
Match: A0A0G4FWR1_VITBC (Radical SAM core domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FWR1_VITBC)

HSP 1 Score: 330 bits (845), Expect = 6.610e-106
Identity = 181/356 (50.84%), Postives = 237/356 (66.57%), Query Frame = 0
Query:   82 LLSLDFDDLAKLLKGSGRAKMVWAALSQGVDPFSEAATELEFLTPKTAAVLRENVQDLPWQVTRESVSSCGTRKLLVRLEDGLDVETVVIPDLTGSRLSTVCVSSQIGCAENCQFCMTGKMGLVRNLTAGEILGQVFFARGTARKHG--MPPLTNVVYMGMGEPLDNPAAVTRSLGLLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPSRLAWSVHAATDDVRRVLVPTTVHTMIELRDAFAEVLESRPREH------------LFVEIVLIQGMNDSPELARALASLLRPLPRRASINLLPYNDAGHPVFRASSSEAVEEFQRVLNEEGFIATIRTARGDEESSACGQLATSA 423
            LLSL  ++LA  + G+GRA+ +W AL +G  P     +  + L+ +    L E  Q LP++V  E+VS+CGT KLLVRL DG  VETV+IP   G   ST+CVSSQIGCA  C+FC TG+MGL+RNL A EIL QVFFA    R+     PP+ N V+MGMGEPL+NP AV R++  +T PFAF + +S I+VSTVGPSPA+IR ++ +P  +AWSVHAA D+VRR+LVPTTVH M +LRDAFA++L +R  +H            + VE  L+ G+NDS E A AL  L+R LP    +NLLPYND G P +R S    V  +   + E G + ++R ARGDE+ +ACGQLAT+A
Sbjct:   87 LLSLSVEELASSVGGTGRARRIWEALRKGQLPIDIDDSTEKPLSHRALTRLLEATQLLPYEVINETVSACGTVKLLVRLRDGHGVETVIIPSEKGH--STLCVSSQIGCARACRFCKTGQMGLMRNLGADEILAQVFFAHRWVRESDGRTPPIRNAVFMGMGEPLNNPRAVRRAIQTMTDPFAFGLGRSHITVSTVGPSPASIRLLEDIPVHIAWSVHAARDNVRRLLVPTTVHPMTDLRDAFADMLIARSNKHQGPGRFPKRYLNIMVECTLLDGLNDSREDAEALVELVRGLPGEPKVNLLPYNDIGVPGYRRSPEAKVAAYLECVREGGVMCSVRRARGDEDMAACGQLATTA 440          
BLAST of mRNA_C-linearis_contig76.15249.1 vs. uniprot
Match: A0A7S4ESN9_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4ESN9_CHRCT)

HSP 1 Score: 325 bits (834), Expect = 6.620e-105
Identity = 180/348 (51.72%), Postives = 229/348 (65.80%), Query Frame = 0
Query:   82 LLSLDFDDLAKLLKGSGRAKMVWAALSQGVDPFSEAATELEFLTPKTAAVLRENVQDLPWQVTRESVSSCGTRKLLVRLEDGLDVETVVIPDLTGSRLSTVCVSSQIGCAENCQFCMTGKMGLVRNLTAGEILGQVFFARGTARKHGMPPLTNVVYMGMGEPLDNPAAVTRSLGLLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPSRLAWSVHAATDDVRRVLVPTTVHTMIELRDAFAEVLESRPREHLFVEIVLIQGMNDSPELARALASLLRPLPRRASINLLPYN-----DAGHPVFRASSSEAVEEFQRVLNEEGFIATIRTARGDEESSACGQLATSAK 424
            +L++   + A LL G+GRA+ +W  L QGVDPF E A      TP+  A L  ++     +   +S SSCGTRKLL+RLEDGL VE VVIP   G   STVCVSSQ+GC   C FC TG MGL R+LT  EIL Q+F A    +++GMPP+ N+V+MGMGEPLDN  +V  +L ++  PF FA++K  + VSTVGPSP +IR +  + +RLAWSVHAA D +R++LVPTT H+M ELRDAFA+VL  R    L VEI LI G+ND    A AL +LLRPLP +  +NL+PYN      A    F+ SSS +V  FQ+ L E   I T+R  RGD ES+ACGQLA S +
Sbjct:   50 VLAVSPHEAATLLGGAGRARAIWEQLRQGVDPFDEDALPK---TPRARARLLSSLSPPAAETIAQSDSSCGTRKLLLRLEDGLSVECVVIPSPNG-LFSTVCVSSQVGCMRGCAFCATGAMGLTRSLTTHEILEQLFAALVACKRNGMPPIRNIVFMGMGEPLDNLDSVKSALEVMQDPFGFALSKKHLCVSTVGPSPQSIRALTSVGARLAWSVHAAEDSLRKLLVPTTAHSMAELRDAFAQVLAERNDRGLMVEIALIDGVNDGLADAEALHALLRPLPGKTRVNLIPYNVNEGLGAVGRQFKPSSSSSVSRFQKYLIERELICTVRETRGDGESAACGQLAVSVR 393          
BLAST of mRNA_C-linearis_contig76.15249.1 vs. uniprot
Match: A0A7S2W4X2_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4X2_9STRA)

HSP 1 Score: 308 bits (789), Expect = 6.050e-98
Identity = 193/401 (48.13%), Postives = 243/401 (60.60%), Query Frame = 0
Query:   63 ASAAFVPTPVAPQRIS--GGE--LLSLDFDDLAKLLKGSGRAKMVWAALSQGVDPFSEAATELEFLTPKTAAVLRENVQDLPWQVTRES-----------VSSCGTRKLLVRLEDGLDVETVVIPDLTGSRLSTVCVSSQIGCAENCQFCMTGKMGLVRNLTAGEILGQVFFARGTARKHGMPPLTNVVYMGMGEPLDNPAAVTRSLGLLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPSRLAWSVHAATDDVRRVLVPTTVHTMIELRDAFAEVLESRPREHLFVEIVLIQGMNDSPELARALASLLRPLPRRASINLLPYND-----------AGHPVFRASSSEAVEEFQRVLNEEGFIATIRTARGDEESSACGQLATSAKNERHRK--RAVPP 435
            A  A V  P  P  +S  G E  LL+     LA +L    RA+ VW  +++G+DPF     +   L  + A +LRE     P +  R             V++ GT K+LV L+DGL  ETV+IP  T SR +T+CVSSQ+GCA  C FC TG MGL+R+L A EILGQ+F     A++  +PPLTNVV+MGMGEP DN   V   L   T    F +  S ISVSTVGPSP AI  ++ +P+RLAWSVHAA DDVRRVLVPTT H+M+ELRDAFA VL  R    LFVE+ L++G+NDSP  A ALA LLRPLP +  +NLLPYN              H +FR  S E V+ FQ VL  EGF+ T+R+ RG + +SACGQLA  A   + R+  + VPP
Sbjct:   15 ALLAAVLAPGRPLAVSSVGSEVRLLATPPSALAPVLASQSRAQRVWKTIAEGLDPFGMDMPQE--LGREAAKLLREA---FPLEAARGELCTGVDAAVGDVAADGTTKILVHLQDGLMAETVLIP--TDSR-TTICVSSQVGCARACAFCSTGAMGLIRSLDAHEILGQLFAGMQEAQRRELPPLTNVVFMGMGEPADNLEQV--HLAARTMVEGFRLGNSHISVSTVGPSPEAIEALESLPTRLAWSVHAAEDDVRRVLVPTTRHSMVELRDAFARVLARRRDRGLFVEVALVEGLNDSPHHALALAELLRPLPGKTRVNLLPYNPFAPEASDLPRAQAHALFRTPSPETVKTFQDVLYSEGFVCTVRSTRGADSASACGQLANRASLSQSRRPSKEVPP 405          
BLAST of mRNA_C-linearis_contig76.15249.1 vs. uniprot
Match: A0A7S0VC70_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VC70_9CRYP)

HSP 1 Score: 305 bits (781), Expect = 5.380e-96
Identity = 169/348 (48.56%), Postives = 219/348 (62.93%), Query Frame = 0
Query:   86 DFDDLAKLLKGSGRAKMVWAALSQGVDPFSEAATELEFLTPKTAAVLRENVQDLPWQVTRESVSSCGTRKLLVRLEDGLDVETVVIPDLTGSRL-------STVCVSSQIGCAENCQFCMTGKMGLVRNLTAGEILGQVFFARGTARKHGMPPLTNVVYMGMGEPLDNPAAVTRSLGLLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPSRLAWSVHAATDDVRRVLVPTTVHTMIELRDAFAEVLESRPREH--LFVEIVLIQGMNDSPELARALASLLRPLPRRAS---INLLPYNDAGHPVFRASSSEAVEEFQRVLNEEGFIATIRTARGDEESSACGQLAT 421
            D  +L +LL G+G+AKMVW +L  GV P+       E +T K  A+L  + Q +P  V+ ESV+  GT KLLV L+DGL VE+VVIP+             +T+CVSSQ+GC   C FC TGKMG +R LT+ EIL QVF      R+ G+PPL N+V+MGMGEPL+NP  V R+  +LT    F  A+S+++VSTVGPSPAAIR    +P+ LAWSVHAA D++RR LVPTT HTM ELRD F  VL  R R+     V + LI G+ND  E A AL  LLRP+        ++L+PYND G   +  +  + V  FQR L + GF   +R  RGD+ ++ACGQLAT
Sbjct:  113 DVAELGRLLGGTGKAKMVWESLRDGVSPWENR----EVVTDKARALLERSFQGIPG-VSLESVAGDGTTKLLVDLDDGLQVESVVIPNKGKPSAQGVVEPRTTLCVSSQVGCNRACDFCATGKMGFIRQLTSHEILSQVFHGLRVVRERGLPPLHNIVFMGMGEPLNNPLHVMRATDILTRDKCFGFARSRVTVSTVGPSPAAIRAAGDLPAMLAWSVHAADDELRRRLVPTTAHTMEELRDTFKSVLSKRSRQMSTFMVAVTLIDGLNDGEEQADALVELLRPIQEVVKGLVVDLIPYNDIGEAAYERAGKDNVGAFQRRLRDAGFACFVRVTRGDDGNAACGQLAT 455          
BLAST of mRNA_C-linearis_contig76.15249.1 vs. uniprot
Match: A0A4D9DBV9_9STRA (Radical SAM core domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBV9_9STRA)

HSP 1 Score: 302 bits (773), Expect = 1.680e-95
Identity = 174/366 (47.54%), Postives = 226/366 (61.75%), Query Frame = 0
Query:   82 LLSLDFDDLAKLLKGSGRAKMVWAALSQGVDPFSEAATELEF---LTPKTAAVLRENVQDLPWQVTRESVSSCGTRKLLVRLEDGLDVETVVIPDLTGSRL--------------------STVCVSSQIGCAENCQFCMTGKMGLVRNLTAGEILGQVFFARGTARKHGMPPLTNVVYMGMGEPLDNPAAVTRSLGLLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPS-RLAWSVHAATDDVRRVLVPTTVHTMIELRDAFAEVLESRPREHLFVEIVLIQGMNDSPELARALASLLRPLPRRA-SINLLPYNDAGHPVFRASSSEAVEEFQRVLNEEG-FIATIRTARGDEESSACGQLAT 421
            +L L  D L ++L+G GRA+MVW A+ +G+DP         F   +T +T A+L+E V    W + + + S+CGT KLL+RL DGL VETVVIP   G R                     STVCVSSQ+GCA+ C FC+TG MG VR+L+  EIL QV  A    R  G+P L NVV+MGMGEPL+N  AV  +L  +T P AFA++ S I++STV PSP  +R    MP  RLAWSVH A D +RR LVPTT  +M+ELR+AF EV+  R   ++F+E+ LI+G+NDS + A AL  LLRP  R A  +NL+PYND G   +  S S  +  FQ  +   G ++   RT RG E+SSACGQLAT
Sbjct:   29 ILKLGTDGLERVLEGKGRARMVWRAVREGLDPHETDPASPMFDSRITSRTRAILQERVLGPQWTLVQRTSSTCGTLKLLIRLHDGLMVETVVIPARLGPRSNGLARGMSREAEDSLALASRSTVCVSSQVGCAQACAFCLTGTMGFVRHLSMDEILMQVQLALQKVRAEGLPGLRNVVFMGMGEPLNNHRAVRHALACMTDPHAFALSPSFITLSTVAPSPGHVRHFLDMPKIRLAWSVHGAADGLRRTLVPTTSSSMVELREAFREVMAQRGDTYIFIEVTLIEGVNDSLDDAEALVELLRPFGRTAVKVNLIPYNDTGVNGWMPSPSGNILAFQTYVRAHGGWLTFARTPRGREDSSACGQLAT 394          
BLAST of mRNA_C-linearis_contig76.15249.1 vs. uniprot
Match: W7TTG9_9STRA (Radical SAM core domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TTG9_9STRA)

HSP 1 Score: 302 bits (773), Expect = 3.770e-94
Identity = 176/366 (48.09%), Postives = 225/366 (61.48%), Query Frame = 0
Query:   82 LLSLDFDDLAKLLKGSGRAKMVWAALSQGVDPFSEAATELEF---LTPKTAAVLRENVQDLPWQVTRESVSSCGTRKLLVRLEDGLDVETVVIPDLTGSRL--------------------STVCVSSQIGCAENCQFCMTGKMGLVRNLTAGEILGQVFFARGTARKHGMPPLTNVVYMGMGEPLDNPAAVTRSLGLLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPS-RLAWSVHAATDDVRRVLVPTTVHTMIELRDAFAEVLESRPREHLFVEIVLIQGMNDSPELARALASLLRPLPRRA-SINLLPYNDAGHPVFRASSSEAVEEFQR-VLNEEGFIATIRTARGDEESSACGQLAT 421
            +L L  D L ++L+G GRA+MVW A+ +G+DP         F   +T +T A+L+E V    W + + + S+CGT KLLVRL DGL VETVVIP   G R                     STVCVSSQ+GCA+ C FC+TG MG VR+L+  EIL QV  A    R  G+P L NVV+MGMGEPL+N  AV  +L  +T P AFA++ S I++STV PSP  +R    MP  RLAWSVH A D +RR LVPTT  +M+ELR+AF EV+  R   ++F+E+ LI+G+NDS + A AL  LLRP  R A  +NL+PYND G   +  S    +  FQ  V    G++   RT RG EESSACGQLAT
Sbjct:  135 ILKLGTDGLERVLEGKGRARMVWRAVREGLDPHETDPASPMFDSRITSRTRAILQERVLGPQWTLVQRTSSTCGTLKLLVRLHDGLMVETVVIPARLGPRSNGLARGMSGEAEDSLALASRSTVCVSSQVGCAQACAFCLTGTMGFVRHLSIDEILMQVQLALQKVRAEGLPGLRNVVFMGMGEPLNNHRAVRHALACMTDPHAFALSPSFITLSTVAPSPGHVRHFLDMPKIRLAWSVHGAADGLRRTLVPTTSSSMVELREAFREVMAQRGDTYIFIEVTLIEGVNDSLDDAEALVELLRPFGRTAVKVNLIPYNDTGVNGWMPSPPGNILAFQTYVRTHGGWLTFARTPRGREESSACGQLAT 500          
BLAST of mRNA_C-linearis_contig76.15249.1 vs. uniprot
Match: A0A0G4G3K1_9ALVE (Radical SAM core domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G3K1_9ALVE)

HSP 1 Score: 294 bits (753), Expect = 2.840e-91
Identity = 166/359 (46.24%), Postives = 226/359 (62.95%), Query Frame = 0
Query:   81 ELLSLDFDDLAKLLKGSGRAKMVWAALSQGVDPFS---------EAATELEFLTPKTAAVLRENVQDLPWQVTR--ESVSSCGTRKLLVRLEDGLDVETVVIPDLTGSRLSTVCVSSQIGCAENCQFCMTGKMGLVRNLTAGEILGQVFFARGTARKHGMPPLTNVVYMGMGEPLDNPAAVTRSLGLLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPSRLAWSVHAATDDVRRVLVPTTVHTMIELRDAFAEVLESRPR-----EHLFVEIVLIQGMNDSPELARALASLLRPLPRRASINLLPYNDAGHPVFRASSSEAVEEFQRVLNEEGFIATIRTARGDEESSACGQLATSA 423
            ELL+  F +L++L  G+ RA+M+W  +  GV P           +      F++ +T   L  +   + + +T+  E VS CGTRKLL    DGL VETV+IP       +TVCVSSQ+GC+  C FC TG+MGL+RNL++GEIL Q+F A+   R+ GMP L  VV+MGMGEP++NP  V  ++  L     F  +K K+++STVG SPA+IR++   P  LAWS+HAA+D+ R++LVPTT H + EL  AF EV+E+R         L VE+ L+ G+ND  E AR LAS+L P+  R  +NL+PYND G    R SS E+V  FQR L  EG  A++R  RGDEES+ACGQLAT +
Sbjct:   69 ELLNSSFVNLSELCGGTTRARMIWDCVRDGVQPLGLQGDGESHGDGTVLPSFVSRETRQKLGLHFGGMDFSLTQRGEKVSGCGTRKLLTEFRDGLQVETVLIPS---DDKTTVCVSSQVGCSRGCIFCSTGRMGLLRNLSSGEILCQIFQAQKRRRETGMPRLERVVFMGMGEPMNNPKNVREAIEALVDEKRFKFSKRKVTLSTVGVSPASIRQLVDFPCVLAWSLHAASDEKRQLLVPTTRHGVSELSGAFLEVMEARKHLKGSLRLLMVEVALMAGLNDGEEDARLLASVLSPVKDRVLVNLIPYNDTGAEGLRRSSEESVRRFQRALWAEGLRASVRVTRGDEESAACGQLATGS 424          
BLAST of mRNA_C-linearis_contig76.15249.1 vs. uniprot
Match: A0A2E6VQA8_9DELT (Radical SAM core domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E6VQA8_9DELT)

HSP 1 Score: 288 bits (738), Expect = 3.880e-91
Identity = 155/341 (45.45%), Postives = 220/341 (64.52%), Query Frame = 0
Query:   82 LLSLDFDDLAKLLKGSGRAKMVWAALSQGVDPFSEAATELEFLTPKTAAVLRENVQDLPWQVTRESVSSCGTRKLLVRLEDGLDVETVVIPDLTGSRLSTVCVSSQIGCAENCQFCMTGKMGLVRNLTAGEILGQVFFARGTARK-HGMPPLTNVVYMGMGEPLDNPAAVTRSLGLLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPSRLAWSVHAATDDVRRVLVPTTVHTMIELRDAFAEVLESRPREHLFVEIVLIQGMNDSPELARALASLLRPLPRRASINLLPYNDAGHPVFRASSSEAVEEFQRVLNEEGFIATIRTARGDEESSACGQLAT 421
            +LS  FD LA+ L GSGRAK +W+ L  G DPF         L  K    L +N+     +VT    S CGT KL + L+D L+VETV+IP + G   +TVC+SSQ+GCA  C FC TG+M L+RNL A EIL QV+ AR   ++   +PP  N+V+MGMGEPL+N   V +++  + HP  FA+   +I++STVGPSP+ I+++K +P+R+AWS+HAA D  R+ LVPTT H++  L DAFA+VL  R +E LF+E+ LI  +ND  E A  L + L+ LP  + +NL+P N      F   + E ++ F+ +L+E G+  ++R +RGDEE++ACGQL T
Sbjct:    6 ILSCSFDALAQTLAGSGRAKAIWSLLRNGQDPFQAP------LGKKLTRALNQNLTAFDERVTTRHQSPCGTLKLGIALQDKLEVETVLIP-MNGR--TTVCISSQVGCARGCTFCSTGQMNLIRNLKAHEILFQVYAARRCIQESQDLPPFRNIVFMGMGEPLNNFEEVKKAITQMVHPLTFAIGAKRITLSTVGPSPSLIQKLKTLPTRIAWSIHAAEDTKRQRLVPTTKHSIAALTDAFADVLH-RKKEGLFIELTLIDNVNDRDEDAHHLVTCLKRLPGESRVNLIPVNPTPGNSFAPPTPERIQSFRAILHEAGYFCSVRPSRGDEEAAACGQLIT 336          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig76.15249.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWY7_9PHAE4.350e-21075.71Radical SAM core domain-containing protein n=2 Tax... [more]
A0A835Z3N5_9STRA1.450e-12057.27Radical SAM core domain-containing protein n=1 Tax... [more]
A0A0G4FWR1_VITBC6.610e-10650.84Radical SAM core domain-containing protein n=1 Tax... [more]
A0A7S4ESN9_CHRCT6.620e-10551.72Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S2W4X2_9STRA6.050e-9848.13Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0VC70_9CRYP5.380e-9648.56Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A4D9DBV9_9STRA1.680e-9547.54Radical SAM core domain-containing protein n=1 Tax... [more]
W7TTG9_9STRA3.770e-9448.09Radical SAM core domain-containing protein n=1 Tax... [more]
A0A0G4G3K1_9ALVE2.840e-9146.24Radical SAM core domain-containing protein n=1 Tax... [more]
A0A2E6VQA8_9DELT3.880e-9145.45Radical SAM core domain-containing protein n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 141..410
e-value: 2.5E-82
score: 278.1
IPR007197Radical SAMPFAMPF04055Radical_SAMcoord: 185..348
e-value: 5.5E-12
score: 46.4
IPR004383Ribosomal RNA large subunit methyltransferase RlmN/CfrPIRSFPIRSF006004Cfrcoord: 76..434
e-value: 6.5E-81
score: 269.7
IPR040072Methyltransferase (Class A)PANTHERPTHR3054423S RRNA METHYLTRANSFERASEcoord: 62..429
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..436
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSUPERFAMILY102114Radical SAM enzymescoord: 178..393

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig76contigC-linearis_contig76:951769..955116 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig76.15249.1mRNA_C-linearis_contig76.15249.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig76 951569..955130 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig76.15249.1 ID=prot_C-linearis_contig76.15249.1|Name=mRNA_C-linearis_contig76.15249.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=437bp
MVPLTTRIRWTSAVMATLAVGSSESFLLAPSKAPFYGHSAARAASTAHAA
STATTATTAAEGASAAFVPTPVAPQRISGGELLSLDFDDLAKLLKGSGRA
KMVWAALSQGVDPFSEAATELEFLTPKTAAVLRENVQDLPWQVTRESVSS
CGTRKLLVRLEDGLDVETVVIPDLTGSRLSTVCVSSQIGCAENCQFCMTG
KMGLVRNLTAGEILGQVFFARGTARKHGMPPLTNVVYMGMGEPLDNPAAV
TRSLGLLTHPFAFAMAKSKISVSTVGPSPAAIRRMKGMPSRLAWSVHAAT
DDVRRVLVPTTVHTMIELRDAFAEVLESRPREHLFVEIVLIQGMNDSPEL
ARALASLLRPLPRRASINLLPYNDAGHPVFRASSSEAVEEFQRVLNEEGF
IATIRTARGDEESSACGQLATSAKNERHRKRAVPPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013785Aldolase_TIM
IPR007197rSAM
IPR004383rRNA_lsu_MTrfase_RlmN/Cfr
IPR040072Methyltransferase_A