prot_C-linearis_contig76.15246.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig76.15246.1
Unique Nameprot_C-linearis_contig76.15246.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length87
Homology
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BLAST of mRNA_C-linearis_contig76.15246.1 vs. uniprot
Match: D7FQQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQQ3_ECTSI)

HSP 1 Score: 144 bits (363), Expect = 1.130e-42
Identity = 72/81 (88.89%), Postives = 78/81 (96.30%), Query Frame = 0 
Query:    2 TSFSDLFKLGKEVLKTETFVLHESETRGVNEGRKCLVKCLFVFGLTKAERAQVGDDVRTFRRAKHPALLALQDVISEPEVR 82
            +SFSDLFKLGKEVLKTETFVLHE +TRG +EGRKCLVKCLFVFGLTKAERAQVG+DVRTFRRAKHPA+LALQDVI+EPE R
Sbjct:    8 SSFSDLFKLGKEVLKTETFVLHEGQTRG-DEGRKCLVKCLFVFGLTKAERAQVGEDVRTFRRAKHPAVLALQDVIAEPEER 87
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BLAST of mRNA_C-linearis_contig76.15246.1 vs. uniprot
Match: A0A6H5K5V0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5V0_9PHAE)

HSP 1 Score: 144 bits (363), Expect = 3.260e-38
Identity = 72/81 (88.89%), Postives = 78/81 (96.30%), Query Frame = 0 
Query:    2 TSFSDLFKLGKEVLKTETFVLHESETRGVNEGRKCLVKCLFVFGLTKAERAQVGDDVRTFRRAKHPALLALQDVISEPEVR 82
            +SFSDLFKLGKEVLKTETFVLHE +TRG +EGRKCLVKCLFVFGLTKAERAQVG+DVRTFRRAKHPA+LALQDVI+EPE R
Sbjct:    8 SSFSDLFKLGKEVLKTETFVLHEGQTRG-DEGRKCLVKCLFVFGLTKAERAQVGEDVRTFRRAKHPAVLALQDVIAEPEER 87
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig76.15246.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQQ3_ECTSI1.130e-4288.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K5V0_9PHAE3.260e-3888.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig76contigC-linearis_contig76:924202..925053 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig76.15246.1mRNA_C-linearis_contig76.15246.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig76 924202..925193 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig76.15246.1 ID=prot_C-linearis_contig76.15246.1|Name=mRNA_C-linearis_contig76.15246.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=87bp
MTSFSDLFKLGKEVLKTETFVLHESETRGVNEGRKCLVKCLFVFGLTKAE
RAQVGDDVRTFRRAKHPALLALQDVISEPEVRCEVG*
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