prot_C-linearis_contig76.15243.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig76.15243.1
Unique Nameprot_C-linearis_contig76.15243.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length332
Homology
BLAST of mRNA_C-linearis_contig76.15243.1 vs. uniprot
Match: D7FQQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQQ7_ECTSI)

HSP 1 Score: 468 bits (1205), Expect = 3.300e-163
Identity = 265/341 (77.71%), Postives = 285/341 (83.58%), Query Frame = 0
Query:    1 MAPAGQRFNAVMEVLVHELLQERITRSRVPSSVSIASLRDSRGRRRQVGHQQGAITLDLPRSMGAAFSKKSVGDIAAAGAGTLSDISAGTIPKGNTHESALALTAGGGSSSELFPG---------ENAAEPKERCKTSPLQGKMGVSRSALGIRAEGGREASRKHHTSSTKRGHGHSSPPKGNRASNAGGGVLNKFQFSKDAIRRQQMSQESWIPDDLRMKMMRRSMAVIKENVHESVAQDSLVRKEKKRSSRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFKVCAFCSQLFHDPLDYRPTWEMELQSMRKQREQLAREKEREYWDPLRKAS 332
            MAPAGQR  AVMEVLV EL QERI RSR PSSVSIASLRDS+GRRRQVG++  + +L+LPRS+GA  SK SVGD+AA   GT SDISAG+IPK + H+SAL   A GGS S+  PG         E A + KERCK SPLQGKMG SR  LG R EGGRE  RKHHTSS KRGHGHSSP KGNRAS+AGG VLNKFQFSKDAIRRQQMS ESWIPDDLRMKM+RR MAVIKENV ESVA  S+VRKEKKRSSRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFKVCAFCSQLFHDPL YRPTW+ME+  MRK+REQLAREKEREYWDPLRKA+
Sbjct:    1 MAPAGQRLTAVMEVLVRELAQERIVRSRAPSSVSIASLRDSKGRRRQVGNRHMSTSLELPRSLGANLSK-SVGDVAATDTGTFSDISAGSIPKTSGHQSAL--KAEGGSGSDSPPGGRGGGSTMTEAAGDSKERCKMSPLQGKMGASRKNLGARTEGGREVPRKHHTSSAKRGHGHSSPLKGNRASSAGG-VLNKFQFSKDAIRRQQMSHESWIPDDLRMKMVRRGMAVIKENVFESVAHGSVVRKEKKRSSRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFKVCAFCSQLFHDPLGYRPTWDMEVSRMRKKREQLAREKEREYWDPLRKAT 337          
BLAST of mRNA_C-linearis_contig76.15243.1 vs. uniprot
Match: A0A836CGB7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGB7_9STRA)

HSP 1 Score: 126 bits (317), Expect = 3.060e-29
Identity = 75/187 (40.11%), Postives = 104/187 (55.61%), Query Frame = 0
Query:  180 GGGVLNKFQFSKDAIRRQQMSQESWIPDDLRMKMMRRSMAVIKENVHESVAQDSLVRKEKKRSSRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFK-------------------------------------VCAFCSQLFHDPLDYRPTWEMELQSMRKQREQLAREKEREYWDPLR 329
            GG    K       +R+ Q+SQESWIP DLRMKM+RRS++ + ++V E+ A + +  K+  +++R+ LEI K QE+FG +  RPCALCEQ FS VNLVLAVP+K                                     VCAFCSQ F +P  YRPT EM+  +++    +   ++E+ YWDPLR
Sbjct:  223 GGEARAKPMVKASDVRKPQLSQESWIPIDLRMKMLRRSISAVADSVSETAAWEKVRTKQAAKNARTSLEIAKEQERFGRECPRPCALCEQVFSSVNLVLAVPYKAIMDVREHWHEKAPHRLGPPKASHNMKRPPQCYNEVRVCAFCSQQFSEPATYRPTQEMKAAALKDAEAKEEADREKAYWDPLR 409          
BLAST of mRNA_C-linearis_contig76.15243.1 vs. uniprot
Match: A0A7S2LA26_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LA26_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 3.820e-7
Identity = 44/146 (30.14%), Postives = 67/146 (45.89%), Query Frame = 0
Query:  200 SQESWIPDDLRMKMMRRSMAVIKENVHESVAQDSLVRKEKKRSSRSELEIVKTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFK--------------------------------------VCAFCSQLFHDPLD-YRPTWEMEL 306
            S+ESWIP+DLR +M++R  +V K N        S   +E +R     LE  +++EK+G + +R C LC++     NLVLAV  K                                      VC FC+QLF +  + YRP+W+ ++
Sbjct:  254 SRESWIPEDLRRRMLKREFSVAKMNYETREKCQSSNLRELQRCKSDALEKSRSKEKYGIEIKRNCGLCDRPHLSENLVLAVTLKACLDIRDSWGCKYDPEGSSRVRVNPNLRKAPACYNETRVCVFCAQLFDNQQEKYRPSWQAKV 399          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig76.15243.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FQQ7_ECTSI3.300e-16377.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CGB7_9STRA3.060e-2940.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2LA26_9STRA3.820e-730.14Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 299..319

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig76contigC-linearis_contig76:910020..913613 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig76.15243.1mRNA_C-linearis_contig76.15243.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig76 910020..913613 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig76.15243.1 ID=prot_C-linearis_contig76.15243.1|Name=mRNA_C-linearis_contig76.15243.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=332bp
MAPAGQRFNAVMEVLVHELLQERITRSRVPSSVSIASLRDSRGRRRQVGH
QQGAITLDLPRSMGAAFSKKSVGDIAAAGAGTLSDISAGTIPKGNTHESA
LALTAGGGSSSELFPGENAAEPKERCKTSPLQGKMGVSRSALGIRAEGGR
EASRKHHTSSTKRGHGHSSPPKGNRASNAGGGVLNKFQFSKDAIRRQQMS
QESWIPDDLRMKMMRRSMAVIKENVHESVAQDSLVRKEKKRSSRSELEIV
KTQEKFGTKHQRPCALCEQSFSEVNLVLAVPFKVCAFCSQLFHDPLDYRP
TWEMELQSMRKQREQLAREKEREYWDPLRKAS
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