prot_C-linearis_contig76.15173.1 (polypeptide) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig76.15173.1 vs. uniprot
Match: D7FVV5_ECTSI (Transcription elongation factor 1 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVV5_ECTSI) HSP 1 Score: 191 bits (484), Expect = 3.270e-61 Identity = 92/105 (87.62%), Postives = 98/105 (93.33%), Query Frame = 0
Query: 1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMKRKEKIARLRCRMCDISYEMGINYLTEPIDVYTDWIDECEAVNAVEGAAEESKNDEVFIDDQEIAEG 105
MGRRKKSTKKIV+KKNTTLDKVFKCPFCNHDKVVECTM +KEK ARL CRMCD++YEM INYLTEPIDVYTDWIDECEAVNAV+ AAEE K+DE FIDDQEIAEG
Sbjct: 1 MGRRKKSTKKIVVKKNTTLDKVFKCPFCNHDKVVECTMNKKEKTARLLCRMCDVNYEMTINYLTEPIDVYTDWIDECEAVNAVDAAAEEHKDDEQFIDDQEIAEG 105
BLAST of mRNA_C-linearis_contig76.15173.1 vs. uniprot
Match: A0A485LI04_9STRA (Transcription elongation factor 1 homolog n=6 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485LI04_9STRA) HSP 1 Score: 111 bits (278), Expect = 4.360e-30 Identity = 50/84 (59.52%), Postives = 62/84 (73.81%), Query Frame = 0
Query: 1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMKRKEKIARLRCRMCDISYEMGINYLTEPIDVYTDWIDECEAVNAVE 84
MGRRK STKKIV +K + +VFKCPFC+HD V+C M R + L CR+C SY+ INYL+EPIDVYTDWIDECEA++ +
Sbjct: 1 MGRRKTSTKKIVTRKKQVVARVFKCPFCSHDDSVQCKMDRDRNVGHLSCRVCSESYQTNINYLSEPIDVYTDWIDECEALHTAQ 84
BLAST of mRNA_C-linearis_contig76.15173.1 vs. uniprot
Match: A0A024U4B4_9STRA (Transcription elongation factor 1 homolog n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A024U4B4_9STRA) HSP 1 Score: 111 bits (278), Expect = 4.360e-30 Identity = 50/82 (60.98%), Postives = 62/82 (75.61%), Query Frame = 0
Query: 1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMKRKEKIARLRCRMCDISYEMGINYLTEPIDVYTDWIDECEAVNA 82
MGRRK STKKIV +K + +VFKCPFC+HD V+C M R + L CR+C SY+ INYL+EPIDVYTDWIDECEA+++
Sbjct: 1 MGRRKTSTKKIVTRKKQVVARVFKCPFCSHDDSVQCKMDRDRNVGHLTCRICSESYQSNINYLSEPIDVYTDWIDECEALHS 82
BLAST of mRNA_C-linearis_contig76.15173.1 vs. uniprot
Match: A0A329SPD8_9STRA (Transcription elongation factor 1 homolog n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SPD8_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.150e-29 Identity = 51/82 (62.20%), Postives = 62/82 (75.61%), Query Frame = 0
Query: 1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMKRKEKIARLRCRMCDISYEMGINYLTEPIDVYTDWIDECEAVNA 82
MGRRKKSTKKI +K + VFKCPFC+HD+ VEC M R+ I L CR+C S++ I+YL+ PIDVYTDWIDECEA+NA
Sbjct: 46 MGRRKKSTKKIQTRKKQVVSTVFKCPFCSHDEAVECKMDRERNIGHLSCRVCTESFQTPIHYLSAPIDVYTDWIDECEALNA 127
BLAST of mRNA_C-linearis_contig76.15173.1 vs. uniprot
Match: M4B5A6_HYAAE (Transcription elongation factor 1 homolog n=16 Tax=Oomycota TaxID=4762 RepID=M4B5A6_HYAAE) HSP 1 Score: 109 bits (273), Expect = 2.380e-29 Identity = 49/82 (59.76%), Postives = 62/82 (75.61%), Query Frame = 0
Query: 1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMKRKEKIARLRCRMCDISYEMGINYLTEPIDVYTDWIDECEAVNA 82
MGRRKK+TKK+ +K + VFKCPFC+HD+ VEC M R+ I L CR+C S++ I+YL+ PIDVYTDWIDECEA+NA
Sbjct: 1 MGRRKKATKKVQTRKKQAVSTVFKCPFCSHDEAVECKMDRERNIGHLSCRVCTESFQTPIHYLSAPIDVYTDWIDECEALNA 82
BLAST of mRNA_C-linearis_contig76.15173.1 vs. uniprot
Match: A0A6A3LNQ0_9STRA (Transcription elongation factor 1 homolog n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3LNQ0_9STRA) HSP 1 Score: 110 bits (276), Expect = 3.620e-29 Identity = 51/82 (62.20%), Postives = 62/82 (75.61%), Query Frame = 0
Query: 1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMKRKEKIARLRCRMCDISYEMGINYLTEPIDVYTDWIDECEAVNA 82
MGRRKKSTKKI +K + VFKCPFC+HD+ VEC M R+ I L CR+C S++ I+YL+ PIDVYTDWIDECEA+NA
Sbjct: 52 MGRRKKSTKKISTRKKQIVSTVFKCPFCSHDEAVECKMDRERNIGHLSCRVCTESFQTPIHYLSAPIDVYTDWIDECEALNA 133
BLAST of mRNA_C-linearis_contig76.15173.1 vs. uniprot
Match: A0A835ZFT2_9STRA (Transcription elongation factor 1 homolog n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFT2_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.970e-28 Identity = 51/82 (62.20%), Postives = 60/82 (73.17%), Query Frame = 0
Query: 1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMKRKEKIARLRCRMCDISYEMGINYLTEPIDVYTDWIDECEAVNA 82
MGRRK STKKI KK TLD FKCPFC HDKVV+CTM K+ + L+CR CD Y INYL+EPID++T+WID EA +A
Sbjct: 1 MGRRKSSTKKISNKKRPTLDTSFKCPFCCHDKVVQCTMNFKDNVGTLQCRRCDTKYSTVINYLSEPIDIFTEWIDAAEAEHA 82
BLAST of mRNA_C-linearis_contig76.15173.1 vs. uniprot
Match: H3HB17_PHYRM (Uncharacterized protein n=15 Tax=Phytophthora TaxID=4783 RepID=H3HB17_PHYRM) HSP 1 Score: 111 bits (277), Expect = 6.160e-27 Identity = 51/82 (62.20%), Postives = 62/82 (75.61%), Query Frame = 0
Query: 1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMKRKEKIARLRCRMCDISYEMGINYLTEPIDVYTDWIDECEAVNA 82
MGRRKKSTKKI +K + VFKCPFC+HD+ VEC M R+ I L CR+C S++ I+YL+ PIDVYTDWIDECEA+NA
Sbjct: 310 MGRRKKSTKKIQTRKKQVVSTVFKCPFCSHDEAVECKMDRERNIGHLSCRVCTESFQTPIHYLSAPIDVYTDWIDECEALNA 391
BLAST of mRNA_C-linearis_contig76.15173.1 vs. uniprot
Match: A0A0G4J6E9_PLABS (Transcription elongation factor 1 homolog n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J6E9_PLABS) HSP 1 Score: 99.8 bits (247), Expect = 2.470e-25 Identity = 48/84 (57.14%), Postives = 57/84 (67.86%), Query Frame = 0
Query: 1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMKRKEKIARLRCRMCDISYEMGINYLTEPIDVYTDWIDECEAVNAVE 84
MG+RK S K++V K L F CPFCNH VEC MKR E +A + CR+CD +Y M IN LTEP+DVY +WIDECE NA E
Sbjct: 1 MGKRK-SKKRVVRKVVDKLATAFDCPFCNHSLTVECKMKRSENVAEISCRICDANYRMPINSLTEPVDVYCEWIDECEQANAEE 83
BLAST of mRNA_C-linearis_contig76.15173.1 vs. uniprot
Match: UPI001CC465E2 (transcription elongation factor 1 homolog n=2 Tax=Telopea speciosissima TaxID=54955 RepID=UPI001CC465E2) HSP 1 Score: 99.4 bits (246), Expect = 5.070e-25 Identity = 46/85 (54.12%), Postives = 57/85 (67.06%), Query Frame = 0
Query: 1 MGRRKKSTKKIVIKKNTTLDKVFKCPFCNHDKVVECTMKRKEKIARLRCRMCDISYEMGINYLTEPIDVYTDWIDECEAVNAVEG 85
MG+RK S K KK L+ VF CPFCNH+K V CT+ RKE I L C +C Y IN L+EPID+Y++WIDECE VN ++G
Sbjct: 1 MGKRKSSAKPAPKKKMEKLESVFNCPFCNHEKSVNCTIDRKEMIGELTCCICQEKYSTAINNLSEPIDIYSEWIDECEKVNDMDG 85 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig76.15173.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig76.15173.1 ID=prot_C-linearis_contig76.15173.1|Name=mRNA_C-linearis_contig76.15173.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=106bpback to top |