prot_C-linearis_contig74.15028.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig74.15028.1
Unique Nameprot_C-linearis_contig74.15028.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length534
Homology
BLAST of mRNA_C-linearis_contig74.15028.1 vs. uniprot
Match: D8LD49_ECTSI (DNA polymerase epsilon subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD49_ECTSI)

HSP 1 Score: 972 bits (2513), Expect = 0.000e+0
Identity = 484/518 (93.44%), Postives = 507/518 (97.88%), Query Frame = 0
Query:   16 MSTAQAVFRAFKLQGLGIRADAAKAIVRVVDREENADEAVQAIIRSTKARIERNELSSNVVDVDTVSAVVADLTSREEDLAGSSTQMQSAFLRPRLYFDPVRNTLLLEDAASRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMTAGVFEVAMVGFPPIEAREDTLRALGRADLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVNLDKPQVMEKLEALFEGFQYAQPPPHFVLMGNFCSSPITHAADSVAQAAGRFESLCKVILKFPELASSAKFIFVPGPQDPGAGDTLPRPPLPEYFTRSLRENLQHASFATNPCRLRFFTQEMVFFRDDILKKIQRHALFPPSDADMDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNGCCSLNPGSFPSDASFVVYRPATQTVEFSHVD 533
            MS+AQAVFRAFKLQGLG+RADAA+AIVRVV+REE ADEAVQAIIRS KARIERNELSSNVVDVDTVSAVVADLTSRE+DLA SSTQMQ+AF+RPRLYFDPVRNTLLLEDA +RKRSMHGPAESKARMYRERFLMVRQRV RHDLFRPPIIESSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLED VTRLPLDLSNAHKTEG+FTEHCVVIVEGKMTAGVF+VAMVGFPPIEARED+LRALGRADLFGTGVNPQQMERMRQLE+KATDAMFVIVSDVNLDKPQVMEKLEALF+GFQYAQPPPHFVLMGNFCSSPITHAADSVAQA  RF+SLCK+ILKFP+LASSAKF+FVPGPQDPGAGDTLPRPPLP YFT+SLRENL+HASFATNPCRLRFFTQEMVFFRDDILKK+QRHALFPPSD DMD+TEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLN CCSLNPGSFPSD+SFVVYRPAT+TVEFSHVD
Sbjct:    1 MSSAQAVFRAFKLQGLGLRADAARAIVRVVEREEGADEAVQAIIRSVKARIERNELSSNVVDVDTVSAVVADLTSREQDLADSSTQMQNAFVRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVQRHDLFRPPIIESSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDEVTRLPLDLSNAHKTEGLFTEHCVVIVEGKMTAGVFQVAMVGFPPIEAREDSLRALGRADLFGTGVNPQQMERMRQLELKATDAMFVIVSDVNLDKPQVMEKLEALFDGFQYAQPPPHFVLMGNFCSSPITHAADSVAQAVARFDSLCKLILKFPDLASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFRDDILKKMQRHALFPPSDPDMDVTEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNDCCSLNPGSFPSDSSFVVYRPATRTVEFSHVD 518          
BLAST of mRNA_C-linearis_contig74.15028.1 vs. uniprot
Match: A0A835YQA3_9STRA (DNA polymerase epsilon subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQA3_9STRA)

HSP 1 Score: 517 bits (1331), Expect = 1.170e-176
Identity = 265/522 (50.77%), Postives = 364/522 (69.73%), Query Frame = 0
Query:   16 MSTAQAVFRAFKLQGLGIRADAAKAIVRVVDREENADEAVQAIIRSTKARIERNELSSNVVDVDTVSAVVADLTSREEDLAGSSTQMQSAFLRPRLYFDPVRNTLLLEDAASRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMTAGVFEVAMVGFPPIEAREDTLRALGRADLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVNLDKPQVMEKLEALFEGFQYAQPPPHFVLMGNFCSSPITHAADSVAQAAGRFESLCKVILKFPELASSAKFIFVPGPQDPGA--GDTLPRPPLPEYFTRSLRENLQHASFATNPCRLRFFTQEMVFFRDDILKKIQRHALFPPSDA----DMDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNGCC-SLNPGSFPSDASFVVYRPATQTVEFS 530
            M   + + +AF+LQGL +  +A KAI+ V++ EE++  A+ A+I + K +IER EL S V+D   V+AV  DL++ E+DLA +S ++ +AF   RL++DP+R +L  E    R   +H   E+K  M R+R L+++QR  RH+LFR P+I SSR++ IKL+ LDSL+GS   + ++GMLTQP EG Y +EDL  ++P+D+S A  T G+FTE+CVV+ EG+M  G F + M+GFPP E R+ T  A+G+ DLFGTG+  QQ+E +  LE  A ++MF+++SDV+LDKP VMEKL  +FEGF     PP FVLMG+F S+PI   ++SVAQ A +F++L  +I +FP LA  A F+ VPGP DP    G  LPR P+P YF + L E + +   AT+PCRLRF+TQE+V FRDDI KK+QRH + PP +     +MD +EH  KTLL QGHLCPLPLS+RPIH + D AL LYPLP V +LADR+EQ+ W  +    ++NPGSFPSD SFVVYRP++  VEFS
Sbjct:    1 MGLMRQIAQAFRLQGLQLTGEAMKAIISVIESEEDSAAALGAVISAIKDKIERKELRSTVIDEAAVAAVAIDLSNTEDDLARASLKVLNAFEGARLWYDPLRKSLQWETQEQRTSVLHAGPEAKGEMLRDRLLLMQQRTQRHELFRAPVIASSRKDTIKLTSLDSLLGSHGGKCIMGMLTQPSEGAYHIEDLTCQVPIDVSGAGYTAGMFTENCVVVAEGEMVDGAFRIDMMGFPPPELRKATALAIGQPDLFGTGMTHQQVELLDNLEGDAEESMFILLSDVHLDKPAVMEKLRVIFEGFSDMPEPPLFVLMGDFSSAPINQTSESVAQMADKFDALGSLIAEFPALAQHANFVIVPGPNDPATIGGMALPRGPIPRYFAKGLVERVSNVHLATSPCRLRFYTQEIVLFRDDIFKKMQRHCIVPPKNPPDAPNMDASEHLVKTLLDQGHLCPLPLSSRPIHCQFDAALRLYPLPQVVILADRSEQFSWQYHDSTWAINPGSFPSDFSFVVYRPSSGDVEFS 522          
BLAST of mRNA_C-linearis_contig74.15028.1 vs. uniprot
Match: A0A7S4I565_9STRA (DNA polymerase epsilon subunit n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I565_9STRA)

HSP 1 Score: 416 bits (1069), Expect = 1.030e-136
Identity = 229/541 (42.33%), Postives = 335/541 (61.92%), Query Frame = 0
Query:   22 VFRAFKLQGLGIRADAAKAIVRVVDREE--NADEAVQAIIRSTKARI----ERNELSSNVVDVDTVSAVVADLTSREEDLAGSSTQMQSAFLRPRLYFDPVRNTLLLEDAASRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRREYIK------LSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAH-KTEGIFTEHCVVIVEGKMTAGVFEVAMVGFPPIEAREDTLRALG--RADLFGTGVNPQQMERMRQLEVK-ATDAMFVIVSDVNLDKPQVMEKLEALFEGFQYAQPPPHFVLMGNFCSSPITHAADSVAQAAGRFESLCKVILKFPELASSAKFIFVPGPQDPGAGDTLPRPPLPEYFTRSLRENLQHASFATNPCRLRFFTQEMVFFRDDILKKIQRHALFPPSDADMDI------TEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNGCCSLNPGSFPSDASFVVYRPATQT--------VEFSHV 532
            V RAFK++GL ++A A  A++ V+ RE    A E +  I+   K R+      ++LS  VV    +S VVAD++    D    + Q+  AF  PRL +D +R    L   +S +RS+   A  KA MY +R+ +++QR+ R DLFRP ++ +  R   +      L+P++SL+G + L++LLGM+ Q EEG+Y+LED   ++P+DL+ A   T+G  TE+C+V+VEG+M  G+F+V  +G P IE R+D L A+G    D+F +  +  + E+MR+ E++   D  FVI+SD++LD P V EKLE +F+ +Q   P P FV MGNF S P+T A +        FE L  +I ++P+LA   +FIFVPGP DPG G  LPRPP+P +FT ++R  + HA+F +NPCR+R+F+QE+VF R DI+ K++R+AL  PS+ D+D        +H  K++L QGHL PLP S  PI W+ D AL LYPLP+  ++ DR +Q       C ++NPGSFPSD SFVVYRP  +         VEFS +
Sbjct:   11 VARAFKMRGLAVQASALDAMLNVLKRESPHTAQETLHMILDEIKERMMSSSNTSQLSQLVVTKRLLSDVVADMSRDGGDFTDEAVQLLDAFQMPRLAYDSMRKQFTLMTDSSEERSLFAEAPHKADMYAQRYGLIQQRILRQDLFRPRLVTADGRRSDESNATHVLTPVESLLGQSGLKFLLGMIVQVEEGRYYLEDTTAQVPMDLTGAEILTDGFITENCIVLVEGEMVDGIFQVVRMGHPIIETRQDALDAIGLQNTDIFNSMSSLAEQEKMREQEIRHGQDGEFVILSDLHLDNPVVFEKLEKMFDAYQDLTPLPIFVFMGNFSSKPLTSAREGPKMMVSYFEELANLIGQYPKLAKEGRFIFVPGPNDPGMGSVLPRPPIPAFFTGAIRSKVPHANFVSNPCRMRYFSQEIVFCRQDIVNKLRRNALISPSNGDIDKEDEQRPVQHALKSMLDQGHLSPLPQSFSPICWQYDHALRLYPLPNALIVGDRVKQCYESYAECDAVNPGSFPSDFSFVVYRPVGECNGDEIKSDVEFSQI 551          
BLAST of mRNA_C-linearis_contig74.15028.1 vs. uniprot
Match: A0A7S1GD26_9STRA (DNA polymerase II subunit 2 (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GD26_9STRA)

HSP 1 Score: 399 bits (1025), Expect = 1.520e-130
Identity = 210/475 (44.21%), Postives = 305/475 (64.21%), Query Frame = 0
Query:   19 AQAVFRAFKLQGLGIRADAAKAIVRVVDREENADEAVQAIIRSTKARIERNELSSNVVDVDTVSAVVADLTSREEDLAGSSTQMQSAFLRPRLYFDPVRNTLLLEDAASRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMTAGVFEVAMVGFPPIEAREDTLRALGRADLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVNLDKPQVMEKLEALFEGFQYAQPPPHFVLMGNFCSSPITHAADSVAQAAGRFESLCKVILKFPELASSAKFIFVPGPQDPGAGDTLPRPPLPEYFTRSLRENLQHASFATNPCRLRFFTQEMVFFRDDILKKIQRHALFPPSDAD--MDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLAD 491
            A+ V  AFK +G+  RADA +A+  V+ RE   DEA+ +II                  + TV  VVA+LT  EED+A  S ++      P+  ++  R T    DA +    +H PAE+   M+RER+ +V QRV R+ +F PP++ SS+REY +L+PL+SL+G+   +++LGML QPEEG+Y +ED  +R+P+DLS A  T G+FTE  +V+ +G++  G F VAM+GFPP E R D+L A+G  D  G    P ++ +++ LE +A  +MFVI+SDV+LD P+V +K++AL EGF    P    V MGNF S+P  H AD     A     L  +I  +P LA+ +KF+FVPG  DPG G  LPR P+P  FT++LR  +++  FA+NPCRLRF++Q++V FR D++ K++RHA+ PP+DA    +ITEH  +T++ QGHLCP+  + +P++W  D AL LYPLP VA+LAD
Sbjct:   49 AKKVHHAFKFRGMSARADAVRAVASVLQREPEPDEAMDSIIDXXXXXXXXXXXXXXXXXLATVEQVVAELTRDEEDIAQESIRVFQTADVPKFLYNAARKTFYKVDAPA---GLHCPAETNIAMWRERYQLVEQRVLRNAMFSPPVLGSSKREYFQLTPLESLLGTTGTKYVLGMLVQPEEGRYCIEDQSSRVPIDLSAASTTSGLFTECSIVLAQGELREGTFHVAMMGFPPPEKRVDSLLAMGTVDPMGLLTTPHELRKVQALEEEAEASMFVILSDVHLDNPRVFDKVQALLEGFADVVPDV-IVFMGNFISAPFGHGADDRRLYAENLTRLADLIAGYPSLANGSKFVFVPGLDDPG-GSVLPRAPIPAVFTKALRAQVRNVEFASNPCRLRFYSQDIVLFRHDLVSKMRRHAVVPPTDAHGTFEITEHLVRTVVDQGHLCPMAPTVQPVYWGKDHALRLYPLPQVAILAD 518          
BLAST of mRNA_C-linearis_contig74.15028.1 vs. uniprot
Match: B8C9U5_THAPS (DNA polymerase II subunit 2 (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9U5_THAPS)

HSP 1 Score: 384 bits (985), Expect = 9.780e-125
Identity = 210/507 (41.42%), Postives = 316/507 (62.33%), Query Frame = 0
Query:   26 FKLQGLGIRADAAKAIVRVVDREE--NADEAVQAIIRSTKARIER---NELSSNVVDVDTVSAVVADLTSREEDLAGSSTQMQSAFLRPRLYFDPVRNTLLLEDAASRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRREYIK-LSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHK-TEGIFTEHCVVIVEGKMTAGVFEVAMVGFPPIEAREDTLRALG--RADLFGTGVNPQQMERMRQLEVK-ATDAMFVIVSDVNLDKPQVMEKLEALFEGFQYAQPPPHFVLMGNFCSSPITHAADSVAQAAGRFESLCKVILKFPELASSAKFIFVPGPQDPGAGDTLPRPPLPEYFTRSLRENLQHASFATNPCRLRFFTQEMVFFRDDILKKIQRHALFPPSDADMDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNGCCSLNPGSFPSDASFVVYRP 522
            FK++GL I+A A  +I+ V+  E   + D+ + AII   K ++       ++  VV  D +  VVAD++   +D+   + Q+  AF  PRL +D +R    L +     +S+ G A  K  M+ +R+ ++ QR+ R D+F+P +I +        L+P++SL+G +  R+LLGM+ Q EEGKY+LED  +++ L+ S A   T+G  TE+ VV+VEG+   GV  V  +G P +E R D+++A+G    D+F +  +  ++E++R  E+K   D MFV++SDV+LD P V+EK+E + EG+    P P FV MGNF S P++ A+D      G FE L  VI KFP +A+  +F+FVPGP DPG    LPR P+P +FT SLR  ++HA FA+NPCR+RFF++E+VFFRDD++ K++RH L  P  +   +++   KT+L QGHL PLPLSA PI+W+ D AL LYP P   ++ DR +QY      C ++NPG F +  +FVVYRP
Sbjct:    1 FKMRGLSIQAPALNSILNVLKNEPPTSKDDTLFAIIDEIKEKMTTVGGGGMNQCVVTTDLLEDVVADMSRGAKDVTEEAVQLLDAFKTPRLEYDSMRKVFSLVEGG---KSVCGEAVDKVDMFSQRYSLIHQRILRQDIFQPKLITARGGGTTHTLTPVESLLGRSGRRFLLGMIVQVEEGKYYLEDHTSQVLLNFSQASLLTDGFVTENSVVLVEGEAIDGVLHVHHMGNPIVENRSDSIKAIGLQNTDIFNSIGSLSELEKLRDQEMKHGQDGMFVVLSDVHLDSPAVIEKIELMLEGYSDFTPLPIFVFMGNFTSKPLSGASDGTKAMIGYFEDLAAVITKFPNIAAEGRFVFVPGPNDPGITGVLPRGPIPNFFTSSLRSKVKHAVFASNPCRMRFFSKEIVFFRDDLVGKMRRHCLLQPRSSVHKLSQFAVKTVLDQGHLSPLPLSASPIYWQHDHALRLYPFPDALIVGDRVDQYYENYEECDAINPGPFSAGFNFVVYRP 504          
BLAST of mRNA_C-linearis_contig74.15028.1 vs. uniprot
Match: A0A8K1CHQ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHQ1_PYTOL)

HSP 1 Score: 381 bits (978), Expect = 2.800e-123
Identity = 211/537 (39.29%), Postives = 327/537 (60.89%), Query Frame = 0
Query:   19 AQAVFRAFKLQGLGIRADAAKAIVRVVDREENADEAVQAIIRSTKARIERNELSSNVVDVDTVSAVVADLTSREEDLAGSSTQMQSAFLRPRLYFDPVRNTLLLEDAASRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRR-EYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMTAGVFEVAMVGFPPIEAREDTLRALGRADLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVNLDKPQVMEKLEALFEGFQYAQPPPHFVLMGNFCSSPITHAADS--VAQAAGRFESLCKVILKFPELASSAKFIFVPGPQDPGAGDTLPRPPLPEYFTRSLRENLQHASFATNPCRLRFFTQEMVFFRDDILKKIQRHALFP--PSD-----------------ADMDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNGCCSLNPGSFPSDASFVVYRPATQTVEFSHVD 533
            A+ V RA KLQGL +  DA + +V  +  E   +  +  ++ + K  I+R++++S+VV ++ + + +  L +  E+    S Q+  AF  PRL ++   +  L E  A R RS+H PAES+ ++ R+RF ++  RV R+ +F PP I  S   +YI+LS ++SL+G   +R ++GML Q E  +Y+LEDL +R+ ++L+NA  T G+FT +CVV+VEG++   +  V  +GFPP E++ ++   LG  D  G  V+ QQ+E+++ LE     A F+++SDV+LD PQVM+ L+ LF+G +   P   F+LMG+F S+P+   A S  +       + L  +ILK+P+LA  +KF+ VPGP DPG+    PR PLP   TR L   + +    TNPCR+R++TQ++V FR+D+ +K+ RHA+ P  P +                 A +DI++H  KT++ Q HLCP+PL A PI+W  D A+ L+PLP V +L D TEQY+   +     +PG F  D SFV+YRP+T T EFS V+
Sbjct:    3 AKQVLRACKLQGLSLHPDALRRLVDELTAEPTLE--LDNVVYALKNSIDRSKMTSSVVSLEALESALDTLLAVSEENQFESIQIFDAFTTPRLAYNSANS--LYELKADRHRSIHAPAESRLQLLRDRFQLIDLRVKRNKMFAPPAISVSNEVDYIELSKIESLLGVTGIRRVIGMLGQDERKRYYLEDLTSRIYIELNNATYTNGLFTLNCVVLVEGEVIDDLLHVHTMGFPPPESKAESKVILGGVDPLGVEVSAQQLEQIQALEASDHHATFIVLSDVHLDDPQVMQHLDLLFQGLESVLPS-LFILMGDFLSTPVGVGAGSNTLEDLKDYLDELGNLILKYPKLAEFSKFVLVPGPNDPGSSRAFPRHPLPSLCTRDLVRKVPNVICTTNPCRIRYYTQDLVIFREDLHQKMHRHAILPVLPDEVTEANGDAMDVDSGNTHAHVDISKHLVKTIIDQSHLCPMPLMAAPINWAFDSAMQLFPLPDVLILGDSTEQYQLGYSSVAVFHPGPFHVDFSFVLYRPSTNTTEFSRVE 534          
BLAST of mRNA_C-linearis_contig74.15028.1 vs. uniprot
Match: A0A6V2A035_9STRA (DNA polymerase II subunit 2 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2A035_9STRA)

HSP 1 Score: 383 bits (983), Expect = 4.710e-123
Identity = 227/573 (39.62%), Postives = 329/573 (57.42%), Query Frame = 0
Query:   22 VFRAFKLQGLGIRADAAKAIVRVVDREENA---DEAVQAIIRSTKARIERNELSSN----VVDVDTVSAVVADLTSREEDLAGSSTQMQSAFLRPRLYFDPVRNTLLLEDAASR---KRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIES----------------SRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAH-KTEGIFTEHCVVIVEGKMT-AGVFEVAMVGFPPIEAREDTLRALG--RADLFGTGVNPQQMERMRQLEVK-ATDAMFVIVSDVNLDKPQVMEKLEALFEGFQYAQPPPHFVLMGNFCSSPITHAADSVAQAA----GRFESLCKVILKFPELASSAKFIFVPGPQDPGAGDTLPRPPLPEYFTRSLRENLQHASFATNPCRLRFFTQEMVFFRDDILKKIQRHALFPPSDADMD-------------------------------ITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNGCCSLNPGSFPSDASFVVYRPATQTVE 528
            V RAFK++GL I+  A   ++ V+ REEN    DE + AI+   K R+  N +S+     VV    ++ VVA+LT    D+A  + Q+  AF  PRL FD +R    L   A     KRS+ G A +K  MY +RF +++QR+ R DLFRP ++ +                S  +   ++P++SL+G   ++ LLGM+ Q EEG+Y+LED   ++P+DL+     T+    E+C+V+VEG++  AGV  V  +G P IE+R D+L A+G   +D+F +  +  ++E++R+ E++   D MFVI+SDV+LD P VM  L+ LFEGF+  QP P FV MGNF S  ++    + +  A    G F+ L  +I K+P +A   +F+F+PGP D G    +PRPPLP YFT SLR  + HA F +NPCRLRFF++E+VF R+DI+ +++R  L  P   + D                               + +   KTLL QGHLCPLPL + PI+W+ D AL LYPLP   V+ADR EQY     GC ++NPG F ++ SFVVYRP  +  E
Sbjct:   24 VARAFKMRGLSIQTSALNGMMNVLRREENPMERDEKMYAILDEIKERMMMNRVSTGSGQLVVTEQLLADVVAELTRNGMDVAEEAVQLLGAFEMPRLAFDSMRKQFSLAAEAMEDGGKRSLFGSATNKVDMYAQRFALIQQRIMRQDLFRPKLVTADGRYSNNTSDTAVNAGSNNKTHVITPIESLLGRTGIKVLLGMIVQVEEGRYYLEDHTGQVPMDLTQTEILTDCFLNENCIVLVEGEINDAGVLTVHRMGNPIIESRLDSLDAIGLQNSDIFSSISSLSELEKLREQEIEHGQDGMFVILSDVHLDNPAVMRNLDTLFEGFEGMQPLPLFVFMGNFVSRSLSALGVATSSGAKMMVGLFDELANLISKYPAIAKEGRFVFIPGPNDAGLTGIMPRPPLPNYFTASLRSKVPHAVFTSNPCRLRFFSKEIVFCREDIVSELKRSCLLAPPQEEEDPMDEDEVPLMTSETDYIEEGGGRGPSKNTQQVIKRTVKTLLDQGHLCPLPLPSCPIYWQYDHALRLYPLPDAVVVADRVEQYYENYAGCDAINPGPFHAEFSFVVYRPVCEVHE 596          
BLAST of mRNA_C-linearis_contig74.15028.1 vs. uniprot
Match: H3GZH2_PHYRM (DNA polymerase epsilon subunit n=27 Tax=Phytophthora TaxID=4783 RepID=H3GZH2_PHYRM)

HSP 1 Score: 379 bits (974), Expect = 1.080e-122
Identity = 213/533 (39.96%), Postives = 322/533 (60.41%), Query Frame = 0
Query:   22 VFRAFKLQGLGIRADAAKAIVRVVDREENADEAVQAIIRSTKARIERNELSSNVVDVDTVSAVVADLTSREEDLAGSSTQMQSAFLRPRLYFDPVRNTLLLEDAASRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIE-SSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMTAGVFEVAMVGFPPIEAREDTLRALGRADLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVNLDKPQVMEKLEALFEGFQYAQPPPHFVLMGNFCSSPITHAA--DSVAQAAGRFESLCKVILKFPELASSAKFIFVPGPQDPGAGDTLPRPPLPEYFTRSLRENLQHASFATNPCRLRFFTQEMVFFRDDILKKIQRHALFPP------------------SDADMDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNGCCSLNPGSFPSDASFVVYRPATQTVEFSHVD 533
            V RA KLQGL + ADA + +   +  E +    ++ +I + K  I+R++++++VV +  + + +  L +   +      Q+  AF  PRL+F+   N+  L+  A R+  +H   ES+ ++ R+RF+ V  RV R+ LF PP    ++  EY++LS ++SL+G   LR ++GML Q E  + +LED  +R+ +DL+NA  T+G+FT +CVV+VEG++   V  V  +GFPP E +E +L  LG  D  G  V+ QQ E++R LE     A F+++SDV+LD PQVM KL+ LF+G    QP   F+LMG+F S+ I   A  +S+       E L  +ILK+P +A +++F+ VPGP DPG+    PR PLP+  TR L   + +   +TNPCR+R++TQ++V FRDD+ +K+QRHA+ PP                  S +  DI++H  KTL+ Q HLCPLPL A PI+W+ D +L L+P P V +L D TEQY+   +     +PG F +D SFV YRP+T T EFS V+
Sbjct:    6 VLRACKLQGLSLHADALRRLTDELTNESSLQ--LEDVIYAIKNNIDRSKMTTSVVTLGALESALDTLLAVSAENDFEQIQVFGAFDTPRLHFNTHNNSYELKADAHRR--LHAGPESRIQLLRDRFMSVDLRVKRNRLFAPPSAALANTTEYMELSRIESLLGMTGLRRVIGMLGQDERNRMYLEDFTSRIIIDLTNAVYTDGLFTINCVVLVEGEVIDDVLHVQSMGFPPPETKETSLEVLGGIDPLGVEVSAQQREQIRTLEASDHHATFIVLSDVHLDDPQVMSKLDELFQGLDSVQPT-LFILMGDFMSTSIGGGAGSNSLQDLREYLEDLGNLILKYPGIAENSRFVLVPGPNDPGSSRAFPRHPLPDLCTRELVRKVPNVMCSTNPCRIRYYTQDIVIFRDDLQQKMQRHAILPPMPSEHEEAAMDESDEAGQSVSQTDISKHLAKTLIDQAHLCPLPLMANPINWDFDSSLQLFPTPDVLILGDSTEQYQLGYSSVGVFHPGPFHADFSFVFYRPSTNTTEFSRVE 533          
BLAST of mRNA_C-linearis_contig74.15028.1 vs. uniprot
Match: A0A1V9YX49_9STRA (DNA polymerase epsilon subunit n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YX49_9STRA)

HSP 1 Score: 379 bits (972), Expect = 1.580e-122
Identity = 211/528 (39.96%), Postives = 324/528 (61.36%), Query Frame = 0
Query:   16 MSTAQAVFRAFKLQGLGIRADAAKAIVRVVDREENADEAVQAIIRSTKARIERNELSSNVVDVDTVSAVVADLTSREEDLAGSSTQMQSAFLRPRLYFDPVRNTLLLEDAASRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESS--RREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMTAGVFEVAMVGFPPIEAREDTLRALGRADLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVNLDKPQVMEKLEALFEGFQYAQPPPHFVLMGNFCSSPITHAAD--SVAQAAGRFESLCKVILKFPELASSAKFIFVPGPQDPGAGDTLPRPPLPEYFTRSLRENLQHASFATNPCRLRFFTQEMVFFRDDILKKIQRHALFP------PSDADMDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNGCCSLNPGSFPSDASFVVYRPATQTVEFSHVD 533
            M+ A+ VFRAFKLQGL + ADA K ++R +D + +    ++ +I + K  I+R++L+++VV  + + + +  L S   +    + Q+ SA  +P+L ++ +  T   E  A R R +H   E +  ++RERF  V +RV RH  F  P++ ++  +REY++L+ ++SL+G + ++ +LGML Q E    +LEDL  R+ ++        G++T + VVIVEG++   VF V  +G PP E R D++  LG  D  G  V+ QQM ++R+LE +   A FVI+SDV+LD PQVM++L+ LFEG+    P   FVLMGNF S+P+ +  D  S+A      + L  ++LK+P L   +KF+ VPGP DPGA   LPR PLP+  T      +  A+ A+NPCR+R+FT+++V  RDD+  K++R+ L P        D    ++    KT++ QGHLCPL LSA+PIHW  D +L L+PLP V VLAD+T+Q++    G  +++PG F  D SF++YRPAT   E S +D
Sbjct:    1 MAAAKQVFRAFKLQGLTLHADALKRLLREMDEQPSV--LLEDVIYAIKNSIDRSKLTNSVVTQEALESALDTLLSVSTENDYQAIQVFSALEQPKLRYESLSKTY--EVVADRGRRLHAAPEYRVNLFRERFAAVERRVRRHKTFSKPVMATTSLQREYLELTRIESLLGVSGVKRVLGMLGQDERNNIYLEDLTARIYINTDKTICAPGMYTLNSVVIVEGQVRDDVFHVESMGGPPPEYRADSIAILGGLDPLGVEVSAQQMTQIRELEAQDDLASFVILSDVHLDDPQVMKRLDRLFEGYAPFCPT-LFVLMGNFTSTPVGYGQDAISIADFKELLDDLAAILLKYPSLVEHSKFVLVPGPDDPGAASVLPRHPLPDMCTTDFLRKIPSATMASNPCRIRYFTKDIVILRDDLQAKMRRNCLMPLEAAADDEDRTTTVSRQLVKTVIDQGHLCPLSLSAQPIHWAYDGSLQLFPLPDVLVLADKTDQFQVGYAGVAAIHPGPFYVDYSFMLYRPATAVTELSRID 523          
BLAST of mRNA_C-linearis_contig74.15028.1 vs. uniprot
Match: A0A833SQQ2_PHYIN (DNA polymerase epsilon subunit n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SQQ2_PHYIN)

HSP 1 Score: 379 bits (972), Expect = 2.090e-122
Identity = 210/532 (39.47%), Postives = 325/532 (61.09%), Query Frame = 0
Query:   22 VFRAFKLQGLGIRADAAKAIVRVVDREENADEAVQAIIRSTKARIERNELSSNVVDVDTVSAVVADLTSREEDLAGSSTQMQSAFLRPRLYFDPVRNTLLLEDAASRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRR-EYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMTAGVFEVAMVGFPPIEAREDTLRALGRADLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVNLDKPQVMEKLEALFEGFQYAQPPPHFVLMGNFCSSPITHAA--DSVAQAAGRFESLCKVILKFPELASSAKFIFVPGPQDPGAGDTLPRPPLPEYFTRSLRENLQHASFATNPCRLRFFTQEMVFFRDDILKKIQRHALFPPSDADM-----------------DITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNGCCSLNPGSFPSDASFVVYRPATQTVEFSHVD 533
            V RA KLQGL + ADA + +   ++ E +    ++ +I + K  I+R++++S+VV ++ + + +  L +   +      Q+  AF  PRL+F+   N+  L   A   R +H   E++ ++ R RF+ V  RV R+ LF PP    +   EY++LS ++SL+G + +R ++GML Q E  +++LED  +R+ +DL+NA  T+G+FT +CVV+VEG++   V  V  +GFPP E +E +L  LG  D  G  V+ QQ E++R+LE     A F+++SDV+LD P VM KL+ LF+G +  QP   F+LMG+F S+ I   A  +S+       E L  +ILK+P +A +++FI VPGP DPG+    PR PLP+  TR L   + + + +TNPCR+R++TQ++V FRDD+ +K+QRHA+ PP+ ++                  DI++H  KT++ Q HLCPLPL A PI+W+ D +L L+P P V +L D TEQY+   +     +PG F +D SFV YRP+T T EFS V+
Sbjct:    6 VLRACKLQGLSLHADALRRLTEELNNEASLQ--LEDVIYAIKNNIDRSKMTSSVVTLEALESALDTLLAVSAENDYEQIQVFGAFDTPRLHFNMHNNSYDLR--ADTHRRLHAGPEARIQLLRNRFMSVDLRVKRNRLFAPPSAAVANTIEYMELSRIESLLGVSGVRRVIGMLGQDERKRFYLEDFTSRIIIDLTNAAYTDGLFTINCVVLVEGEVIDDVLHVQSMGFPPPETKEASLEGLGGIDPLGVEVSAQQREQIRELEASDHHAAFIVLSDVHLDDPLVMSKLDELFQGLESVQPT-LFILMGDFMSTSIGGGAGSNSLQDLREYLEELGSLILKYPGIAENSRFILVPGPNDPGSSRAFPRHPLPDLCTRELIRKVPNVTCSTNPCRIRYYTQDIVIFRDDLQQKMQRHAILPPTPSEQGEAMDEDGETVHSVSQTDISKHLAKTVIDQAHLCPLPLMANPINWDFDSSLQLFPAPDVLILGDSTEQYQLGYSSIGVFHPGPFHADYSFVFYRPSTNTTEFSRVE 532          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig74.15028.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD49_ECTSI0.000e+093.44DNA polymerase epsilon subunit n=1 Tax=Ectocarpus ... [more]
A0A835YQA3_9STRA1.170e-17650.77DNA polymerase epsilon subunit n=1 Tax=Tribonema m... [more]
A0A7S4I565_9STRA1.030e-13642.33DNA polymerase epsilon subunit n=1 Tax=Odontella a... [more]
A0A7S1GD26_9STRA1.520e-13044.21DNA polymerase II subunit 2 (Fragment) n=1 Tax=Bic... [more]
B8C9U5_THAPS9.780e-12541.42DNA polymerase II subunit 2 (Fragment) n=1 Tax=Tha... [more]
A0A8K1CHQ1_PYTOL2.800e-12339.29Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6V2A035_9STRA4.710e-12339.62DNA polymerase II subunit 2 n=1 Tax=Ditylum bright... [more]
H3GZH2_PHYRM1.080e-12239.96DNA polymerase epsilon subunit n=27 Tax=Phytophtho... [more]
A0A1V9YX49_9STRA1.580e-12239.96DNA polymerase epsilon subunit n=1 Tax=Achlya hypo... [more]
A0A833SQQ2_PHYIN2.090e-12239.47DNA polymerase epsilon subunit n=1 Tax=Phytophthor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007185DNA polymerase alpha/delta/epsilon, subunit BPFAMPF04042DNA_pol_E_Bcoord: 292..496
e-value: 7.3E-51
score: 172.5
IPR016266DNA polymerase epsilon, subunit BPIRSFPIRSF000799DNA_pol_epsilon_2coord: 14..533
e-value: 4.9E-147
score: 488.2
IPR016266DNA polymerase epsilon, subunit BPANTHERPTHR12708DNA POLYMERASE EPSILON SUBUNIT Bcoord: 18..531

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig74contigC-linearis_contig74:581056..591101 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig74.15028.1mRNA_C-linearis_contig74.15028.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig74 581056..591101 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig74.15028.1 ID=prot_C-linearis_contig74.15028.1|Name=mRNA_C-linearis_contig74.15028.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=534bp
GSSGRRSRLLFEGRRMSTAQAVFRAFKLQGLGIRADAAKAIVRVVDREEN
ADEAVQAIIRSTKARIERNELSSNVVDVDTVSAVVADLTSREEDLAGSST
QMQSAFLRPRLYFDPVRNTLLLEDAASRKRSMHGPAESKARMYRERFLMV
RQRVHRHDLFRPPIIESSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEG
KYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMTAGVFEVAMVGFP
PIEAREDTLRALGRADLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVNL
DKPQVMEKLEALFEGFQYAQPPPHFVLMGNFCSSPITHAADSVAQAAGRF
ESLCKVILKFPELASSAKFIFVPGPQDPGAGDTLPRPPLPEYFTRSLREN
LQHASFATNPCRLRFFTQEMVFFRDDILKKIQRHALFPPSDADMDITEHC
TKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLL
NGCCSLNPGSFPSDASFVVYRPATQTVEFSHVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007185DNA_pol_a/d/e_bsu
IPR016266POLE2