prot_C-linearis_contig74.15028.1 (polypeptide) Chordaria linearis ClinC8C monoicous
|
Overview
Homology
BLAST of mRNA_C-linearis_contig74.15028.1 vs. uniprot
Match: D8LD49_ECTSI (DNA polymerase epsilon subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD49_ECTSI) HSP 1 Score: 972 bits (2513), Expect = 0.000e+0 Identity = 484/518 (93.44%), Postives = 507/518 (97.88%), Query Frame = 0
Query: 16 MSTAQAVFRAFKLQGLGIRADAAKAIVRVVDREENADEAVQAIIRSTKARIERNELSSNVVDVDTVSAVVADLTSREEDLAGSSTQMQSAFLRPRLYFDPVRNTLLLEDAASRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMTAGVFEVAMVGFPPIEAREDTLRALGRADLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVNLDKPQVMEKLEALFEGFQYAQPPPHFVLMGNFCSSPITHAADSVAQAAGRFESLCKVILKFPELASSAKFIFVPGPQDPGAGDTLPRPPLPEYFTRSLRENLQHASFATNPCRLRFFTQEMVFFRDDILKKIQRHALFPPSDADMDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNGCCSLNPGSFPSDASFVVYRPATQTVEFSHVD 533
MS+AQAVFRAFKLQGLG+RADAA+AIVRVV+REE ADEAVQAIIRS KARIERNELSSNVVDVDTVSAVVADLTSRE+DLA SSTQMQ+AF+RPRLYFDPVRNTLLLEDA +RKRSMHGPAESKARMYRERFLMVRQRV RHDLFRPPIIESSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLED VTRLPLDLSNAHKTEG+FTEHCVVIVEGKMTAGVF+VAMVGFPPIEARED+LRALGRADLFGTGVNPQQMERMRQLE+KATDAMFVIVSDVNLDKPQVMEKLEALF+GFQYAQPPPHFVLMGNFCSSPITHAADSVAQA RF+SLCK+ILKFP+LASSAKF+FVPGPQDPGAGDTLPRPPLP YFT+SLRENL+HASFATNPCRLRFFTQEMVFFRDDILKK+QRHALFPPSD DMD+TEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLN CCSLNPGSFPSD+SFVVYRPAT+TVEFSHVD
Sbjct: 1 MSSAQAVFRAFKLQGLGLRADAARAIVRVVEREEGADEAVQAIIRSVKARIERNELSSNVVDVDTVSAVVADLTSREQDLADSSTQMQNAFVRPRLYFDPVRNTLLLEDAGTRKRSMHGPAESKARMYRERFLMVRQRVQRHDLFRPPIIESSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDEVTRLPLDLSNAHKTEGLFTEHCVVIVEGKMTAGVFQVAMVGFPPIEAREDSLRALGRADLFGTGVNPQQMERMRQLELKATDAMFVIVSDVNLDKPQVMEKLEALFDGFQYAQPPPHFVLMGNFCSSPITHAADSVAQAVARFDSLCKLILKFPDLASSAKFVFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRFFTQEMVFFRDDILKKMQRHALFPPSDPDMDVTEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNDCCSLNPGSFPSDSSFVVYRPATRTVEFSHVD 518
BLAST of mRNA_C-linearis_contig74.15028.1 vs. uniprot
Match: A0A835YQA3_9STRA (DNA polymerase epsilon subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQA3_9STRA) HSP 1 Score: 517 bits (1331), Expect = 1.170e-176 Identity = 265/522 (50.77%), Postives = 364/522 (69.73%), Query Frame = 0
Query: 16 MSTAQAVFRAFKLQGLGIRADAAKAIVRVVDREENADEAVQAIIRSTKARIERNELSSNVVDVDTVSAVVADLTSREEDLAGSSTQMQSAFLRPRLYFDPVRNTLLLEDAASRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMTAGVFEVAMVGFPPIEAREDTLRALGRADLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVNLDKPQVMEKLEALFEGFQYAQPPPHFVLMGNFCSSPITHAADSVAQAAGRFESLCKVILKFPELASSAKFIFVPGPQDPGA--GDTLPRPPLPEYFTRSLRENLQHASFATNPCRLRFFTQEMVFFRDDILKKIQRHALFPPSDA----DMDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNGCC-SLNPGSFPSDASFVVYRPATQTVEFS 530
M + + +AF+LQGL + +A KAI+ V++ EE++ A+ A+I + K +IER EL S V+D V+AV DL++ E+DLA +S ++ +AF RL++DP+R +L E R +H E+K M R+R L+++QR RH+LFR P+I SSR++ IKL+ LDSL+GS + ++GMLTQP EG Y +EDL ++P+D+S A T G+FTE+CVV+ EG+M G F + M+GFPP E R+ T A+G+ DLFGTG+ QQ+E + LE A ++MF+++SDV+LDKP VMEKL +FEGF PP FVLMG+F S+PI ++SVAQ A +F++L +I +FP LA A F+ VPGP DP G LPR P+P YF + L E + + AT+PCRLRF+TQE+V FRDDI KK+QRH + PP + +MD +EH KTLL QGHLCPLPLS+RPIH + D AL LYPLP V +LADR+EQ+ W + ++NPGSFPSD SFVVYRP++ VEFS
Sbjct: 1 MGLMRQIAQAFRLQGLQLTGEAMKAIISVIESEEDSAAALGAVISAIKDKIERKELRSTVIDEAAVAAVAIDLSNTEDDLARASLKVLNAFEGARLWYDPLRKSLQWETQEQRTSVLHAGPEAKGEMLRDRLLLMQQRTQRHELFRAPVIASSRKDTIKLTSLDSLLGSHGGKCIMGMLTQPSEGAYHIEDLTCQVPIDVSGAGYTAGMFTENCVVVAEGEMVDGAFRIDMMGFPPPELRKATALAIGQPDLFGTGMTHQQVELLDNLEGDAEESMFILLSDVHLDKPAVMEKLRVIFEGFSDMPEPPLFVLMGDFSSAPINQTSESVAQMADKFDALGSLIAEFPALAQHANFVIVPGPNDPATIGGMALPRGPIPRYFAKGLVERVSNVHLATSPCRLRFYTQEIVLFRDDIFKKMQRHCIVPPKNPPDAPNMDASEHLVKTLLDQGHLCPLPLSSRPIHCQFDAALRLYPLPQVVILADRSEQFSWQYHDSTWAINPGSFPSDFSFVVYRPSSGDVEFS 522
BLAST of mRNA_C-linearis_contig74.15028.1 vs. uniprot
Match: A0A7S4I565_9STRA (DNA polymerase epsilon subunit n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I565_9STRA) HSP 1 Score: 416 bits (1069), Expect = 1.030e-136 Identity = 229/541 (42.33%), Postives = 335/541 (61.92%), Query Frame = 0
Query: 22 VFRAFKLQGLGIRADAAKAIVRVVDREE--NADEAVQAIIRSTKARI----ERNELSSNVVDVDTVSAVVADLTSREEDLAGSSTQMQSAFLRPRLYFDPVRNTLLLEDAASRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRREYIK------LSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAH-KTEGIFTEHCVVIVEGKMTAGVFEVAMVGFPPIEAREDTLRALG--RADLFGTGVNPQQMERMRQLEVK-ATDAMFVIVSDVNLDKPQVMEKLEALFEGFQYAQPPPHFVLMGNFCSSPITHAADSVAQAAGRFESLCKVILKFPELASSAKFIFVPGPQDPGAGDTLPRPPLPEYFTRSLRENLQHASFATNPCRLRFFTQEMVFFRDDILKKIQRHALFPPSDADMDI------TEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNGCCSLNPGSFPSDASFVVYRPATQT--------VEFSHV 532
V RAFK++GL ++A A A++ V+ RE A E + I+ K R+ ++LS VV +S VVAD++ D + Q+ AF PRL +D +R L +S +RS+ A KA MY +R+ +++QR+ R DLFRP ++ + R + L+P++SL+G + L++LLGM+ Q EEG+Y+LED ++P+DL+ A T+G TE+C+V+VEG+M G+F+V +G P IE R+D L A+G D+F + + + E+MR+ E++ D FVI+SD++LD P V EKLE +F+ +Q P P FV MGNF S P+T A + FE L +I ++P+LA +FIFVPGP DPG G LPRPP+P +FT ++R + HA+F +NPCR+R+F+QE+VF R DI+ K++R+AL PS+ D+D +H K++L QGHL PLP S PI W+ D AL LYPLP+ ++ DR +Q C ++NPGSFPSD SFVVYRP + VEFS +
Sbjct: 11 VARAFKMRGLAVQASALDAMLNVLKRESPHTAQETLHMILDEIKERMMSSSNTSQLSQLVVTKRLLSDVVADMSRDGGDFTDEAVQLLDAFQMPRLAYDSMRKQFTLMTDSSEERSLFAEAPHKADMYAQRYGLIQQRILRQDLFRPRLVTADGRRSDESNATHVLTPVESLLGQSGLKFLLGMIVQVEEGRYYLEDTTAQVPMDLTGAEILTDGFITENCIVLVEGEMVDGIFQVVRMGHPIIETRQDALDAIGLQNTDIFNSMSSLAEQEKMREQEIRHGQDGEFVILSDLHLDNPVVFEKLEKMFDAYQDLTPLPIFVFMGNFSSKPLTSAREGPKMMVSYFEELANLIGQYPKLAKEGRFIFVPGPNDPGMGSVLPRPPIPAFFTGAIRSKVPHANFVSNPCRMRYFSQEIVFCRQDIVNKLRRNALISPSNGDIDKEDEQRPVQHALKSMLDQGHLSPLPQSFSPICWQYDHALRLYPLPNALIVGDRVKQCYESYAECDAVNPGSFPSDFSFVVYRPVGECNGDEIKSDVEFSQI 551
BLAST of mRNA_C-linearis_contig74.15028.1 vs. uniprot
Match: A0A7S1GD26_9STRA (DNA polymerase II subunit 2 (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GD26_9STRA) HSP 1 Score: 399 bits (1025), Expect = 1.520e-130 Identity = 210/475 (44.21%), Postives = 305/475 (64.21%), Query Frame = 0
Query: 19 AQAVFRAFKLQGLGIRADAAKAIVRVVDREENADEAVQAIIRSTKARIERNELSSNVVDVDTVSAVVADLTSREEDLAGSSTQMQSAFLRPRLYFDPVRNTLLLEDAASRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMTAGVFEVAMVGFPPIEAREDTLRALGRADLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVNLDKPQVMEKLEALFEGFQYAQPPPHFVLMGNFCSSPITHAADSVAQAAGRFESLCKVILKFPELASSAKFIFVPGPQDPGAGDTLPRPPLPEYFTRSLRENLQHASFATNPCRLRFFTQEMVFFRDDILKKIQRHALFPPSDAD--MDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLAD 491
A+ V AFK +G+ RADA +A+ V+ RE DEA+ +II + TV VVA+LT EED+A S ++ P+ ++ R T DA + +H PAE+ M+RER+ +V QRV R+ +F PP++ SS+REY +L+PL+SL+G+ +++LGML QPEEG+Y +ED +R+P+DLS A T G+FTE +V+ +G++ G F VAM+GFPP E R D+L A+G D G P ++ +++ LE +A +MFVI+SDV+LD P+V +K++AL EGF P V MGNF S+P H AD A L +I +P LA+ +KF+FVPG DPG G LPR P+P FT++LR +++ FA+NPCRLRF++Q++V FR D++ K++RHA+ PP+DA +ITEH +T++ QGHLCP+ + +P++W D AL LYPLP VA+LAD
Sbjct: 49 AKKVHHAFKFRGMSARADAVRAVASVLQREPEPDEAMDSIIDXXXXXXXXXXXXXXXXXLATVEQVVAELTRDEEDIAQESIRVFQTADVPKFLYNAARKTFYKVDAPA---GLHCPAETNIAMWRERYQLVEQRVLRNAMFSPPVLGSSKREYFQLTPLESLLGTTGTKYVLGMLVQPEEGRYCIEDQSSRVPIDLSAASTTSGLFTECSIVLAQGELREGTFHVAMMGFPPPEKRVDSLLAMGTVDPMGLLTTPHELRKVQALEEEAEASMFVILSDVHLDNPRVFDKVQALLEGFADVVPDV-IVFMGNFISAPFGHGADDRRLYAENLTRLADLIAGYPSLANGSKFVFVPGLDDPG-GSVLPRAPIPAVFTKALRAQVRNVEFASNPCRLRFYSQDIVLFRHDLVSKMRRHAVVPPTDAHGTFEITEHLVRTVVDQGHLCPMAPTVQPVYWGKDHALRLYPLPQVAILAD 518
BLAST of mRNA_C-linearis_contig74.15028.1 vs. uniprot
Match: B8C9U5_THAPS (DNA polymerase II subunit 2 (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9U5_THAPS) HSP 1 Score: 384 bits (985), Expect = 9.780e-125 Identity = 210/507 (41.42%), Postives = 316/507 (62.33%), Query Frame = 0
Query: 26 FKLQGLGIRADAAKAIVRVVDREE--NADEAVQAIIRSTKARIER---NELSSNVVDVDTVSAVVADLTSREEDLAGSSTQMQSAFLRPRLYFDPVRNTLLLEDAASRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRREYIK-LSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHK-TEGIFTEHCVVIVEGKMTAGVFEVAMVGFPPIEAREDTLRALG--RADLFGTGVNPQQMERMRQLEVK-ATDAMFVIVSDVNLDKPQVMEKLEALFEGFQYAQPPPHFVLMGNFCSSPITHAADSVAQAAGRFESLCKVILKFPELASSAKFIFVPGPQDPGAGDTLPRPPLPEYFTRSLRENLQHASFATNPCRLRFFTQEMVFFRDDILKKIQRHALFPPSDADMDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNGCCSLNPGSFPSDASFVVYRP 522
FK++GL I+A A +I+ V+ E + D+ + AII K ++ ++ VV D + VVAD++ +D+ + Q+ AF PRL +D +R L + +S+ G A K M+ +R+ ++ QR+ R D+F+P +I + L+P++SL+G + R+LLGM+ Q EEGKY+LED +++ L+ S A T+G TE+ VV+VEG+ GV V +G P +E R D+++A+G D+F + + ++E++R E+K D MFV++SDV+LD P V+EK+E + EG+ P P FV MGNF S P++ A+D G FE L VI KFP +A+ +F+FVPGP DPG LPR P+P +FT SLR ++HA FA+NPCR+RFF++E+VFFRDD++ K++RH L P + +++ KT+L QGHL PLPLSA PI+W+ D AL LYP P ++ DR +QY C ++NPG F + +FVVYRP
Sbjct: 1 FKMRGLSIQAPALNSILNVLKNEPPTSKDDTLFAIIDEIKEKMTTVGGGGMNQCVVTTDLLEDVVADMSRGAKDVTEEAVQLLDAFKTPRLEYDSMRKVFSLVEGG---KSVCGEAVDKVDMFSQRYSLIHQRILRQDIFQPKLITARGGGTTHTLTPVESLLGRSGRRFLLGMIVQVEEGKYYLEDHTSQVLLNFSQASLLTDGFVTENSVVLVEGEAIDGVLHVHHMGNPIVENRSDSIKAIGLQNTDIFNSIGSLSELEKLRDQEMKHGQDGMFVVLSDVHLDSPAVIEKIELMLEGYSDFTPLPIFVFMGNFTSKPLSGASDGTKAMIGYFEDLAAVITKFPNIAAEGRFVFVPGPNDPGITGVLPRGPIPNFFTSSLRSKVKHAVFASNPCRMRFFSKEIVFFRDDLVGKMRRHCLLQPRSSVHKLSQFAVKTVLDQGHLSPLPLSASPIYWQHDHALRLYPFPDALIVGDRVDQYYENYEECDAINPGPFSAGFNFVVYRP 504
BLAST of mRNA_C-linearis_contig74.15028.1 vs. uniprot
Match: A0A8K1CHQ1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHQ1_PYTOL) HSP 1 Score: 381 bits (978), Expect = 2.800e-123 Identity = 211/537 (39.29%), Postives = 327/537 (60.89%), Query Frame = 0
Query: 19 AQAVFRAFKLQGLGIRADAAKAIVRVVDREENADEAVQAIIRSTKARIERNELSSNVVDVDTVSAVVADLTSREEDLAGSSTQMQSAFLRPRLYFDPVRNTLLLEDAASRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRR-EYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMTAGVFEVAMVGFPPIEAREDTLRALGRADLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVNLDKPQVMEKLEALFEGFQYAQPPPHFVLMGNFCSSPITHAADS--VAQAAGRFESLCKVILKFPELASSAKFIFVPGPQDPGAGDTLPRPPLPEYFTRSLRENLQHASFATNPCRLRFFTQEMVFFRDDILKKIQRHALFP--PSD-----------------ADMDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNGCCSLNPGSFPSDASFVVYRPATQTVEFSHVD 533
A+ V RA KLQGL + DA + +V + E + + ++ + K I+R++++S+VV ++ + + + L + E+ S Q+ AF PRL ++ + L E A R RS+H PAES+ ++ R+RF ++ RV R+ +F PP I S +YI+LS ++SL+G +R ++GML Q E +Y+LEDL +R+ ++L+NA T G+FT +CVV+VEG++ + V +GFPP E++ ++ LG D G V+ QQ+E+++ LE A F+++SDV+LD PQVM+ L+ LF+G + P F+LMG+F S+P+ A S + + L +ILK+P+LA +KF+ VPGP DPG+ PR PLP TR L + + TNPCR+R++TQ++V FR+D+ +K+ RHA+ P P + A +DI++H KT++ Q HLCP+PL A PI+W D A+ L+PLP V +L D TEQY+ + +PG F D SFV+YRP+T T EFS V+
Sbjct: 3 AKQVLRACKLQGLSLHPDALRRLVDELTAEPTLE--LDNVVYALKNSIDRSKMTSSVVSLEALESALDTLLAVSEENQFESIQIFDAFTTPRLAYNSANS--LYELKADRHRSIHAPAESRLQLLRDRFQLIDLRVKRNKMFAPPAISVSNEVDYIELSKIESLLGVTGIRRVIGMLGQDERKRYYLEDLTSRIYIELNNATYTNGLFTLNCVVLVEGEVIDDLLHVHTMGFPPPESKAESKVILGGVDPLGVEVSAQQLEQIQALEASDHHATFIVLSDVHLDDPQVMQHLDLLFQGLESVLPS-LFILMGDFLSTPVGVGAGSNTLEDLKDYLDELGNLILKYPKLAEFSKFVLVPGPNDPGSSRAFPRHPLPSLCTRDLVRKVPNVICTTNPCRIRYYTQDLVIFREDLHQKMHRHAILPVLPDEVTEANGDAMDVDSGNTHAHVDISKHLVKTIIDQSHLCPMPLMAAPINWAFDSAMQLFPLPDVLILGDSTEQYQLGYSSVAVFHPGPFHVDFSFVLYRPSTNTTEFSRVE 534
BLAST of mRNA_C-linearis_contig74.15028.1 vs. uniprot
Match: A0A6V2A035_9STRA (DNA polymerase II subunit 2 n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2A035_9STRA) HSP 1 Score: 383 bits (983), Expect = 4.710e-123 Identity = 227/573 (39.62%), Postives = 329/573 (57.42%), Query Frame = 0
Query: 22 VFRAFKLQGLGIRADAAKAIVRVVDREENA---DEAVQAIIRSTKARIERNELSSN----VVDVDTVSAVVADLTSREEDLAGSSTQMQSAFLRPRLYFDPVRNTLLLEDAASR---KRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIES----------------SRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAH-KTEGIFTEHCVVIVEGKMT-AGVFEVAMVGFPPIEAREDTLRALG--RADLFGTGVNPQQMERMRQLEVK-ATDAMFVIVSDVNLDKPQVMEKLEALFEGFQYAQPPPHFVLMGNFCSSPITHAADSVAQAA----GRFESLCKVILKFPELASSAKFIFVPGPQDPGAGDTLPRPPLPEYFTRSLRENLQHASFATNPCRLRFFTQEMVFFRDDILKKIQRHALFPPSDADMD-------------------------------ITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNGCCSLNPGSFPSDASFVVYRPATQTVE 528
V RAFK++GL I+ A ++ V+ REEN DE + AI+ K R+ N +S+ VV ++ VVA+LT D+A + Q+ AF PRL FD +R L A KRS+ G A +K MY +RF +++QR+ R DLFRP ++ + S + ++P++SL+G ++ LLGM+ Q EEG+Y+LED ++P+DL+ T+ E+C+V+VEG++ AGV V +G P IE+R D+L A+G +D+F + + ++E++R+ E++ D MFVI+SDV+LD P VM L+ LFEGF+ QP P FV MGNF S ++ + + A G F+ L +I K+P +A +F+F+PGP D G +PRPPLP YFT SLR + HA F +NPCRLRFF++E+VF R+DI+ +++R L P + D + + KTLL QGHLCPLPL + PI+W+ D AL LYPLP V+ADR EQY GC ++NPG F ++ SFVVYRP + E
Sbjct: 24 VARAFKMRGLSIQTSALNGMMNVLRREENPMERDEKMYAILDEIKERMMMNRVSTGSGQLVVTEQLLADVVAELTRNGMDVAEEAVQLLGAFEMPRLAFDSMRKQFSLAAEAMEDGGKRSLFGSATNKVDMYAQRFALIQQRIMRQDLFRPKLVTADGRYSNNTSDTAVNAGSNNKTHVITPIESLLGRTGIKVLLGMIVQVEEGRYYLEDHTGQVPMDLTQTEILTDCFLNENCIVLVEGEINDAGVLTVHRMGNPIIESRLDSLDAIGLQNSDIFSSISSLSELEKLREQEIEHGQDGMFVILSDVHLDNPAVMRNLDTLFEGFEGMQPLPLFVFMGNFVSRSLSALGVATSSGAKMMVGLFDELANLISKYPAIAKEGRFVFIPGPNDAGLTGIMPRPPLPNYFTASLRSKVPHAVFTSNPCRLRFFSKEIVFCREDIVSELKRSCLLAPPQEEEDPMDEDEVPLMTSETDYIEEGGGRGPSKNTQQVIKRTVKTLLDQGHLCPLPLPSCPIYWQYDHALRLYPLPDAVVVADRVEQYYENYAGCDAINPGPFHAEFSFVVYRPVCEVHE 596
BLAST of mRNA_C-linearis_contig74.15028.1 vs. uniprot
Match: H3GZH2_PHYRM (DNA polymerase epsilon subunit n=27 Tax=Phytophthora TaxID=4783 RepID=H3GZH2_PHYRM) HSP 1 Score: 379 bits (974), Expect = 1.080e-122 Identity = 213/533 (39.96%), Postives = 322/533 (60.41%), Query Frame = 0
Query: 22 VFRAFKLQGLGIRADAAKAIVRVVDREENADEAVQAIIRSTKARIERNELSSNVVDVDTVSAVVADLTSREEDLAGSSTQMQSAFLRPRLYFDPVRNTLLLEDAASRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIE-SSRREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMTAGVFEVAMVGFPPIEAREDTLRALGRADLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVNLDKPQVMEKLEALFEGFQYAQPPPHFVLMGNFCSSPITHAA--DSVAQAAGRFESLCKVILKFPELASSAKFIFVPGPQDPGAGDTLPRPPLPEYFTRSLRENLQHASFATNPCRLRFFTQEMVFFRDDILKKIQRHALFPP------------------SDADMDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNGCCSLNPGSFPSDASFVVYRPATQTVEFSHVD 533
V RA KLQGL + ADA + + + E + ++ +I + K I+R++++++VV + + + + L + + Q+ AF PRL+F+ N+ L+ A R+ +H ES+ ++ R+RF+ V RV R+ LF PP ++ EY++LS ++SL+G LR ++GML Q E + +LED +R+ +DL+NA T+G+FT +CVV+VEG++ V V +GFPP E +E +L LG D G V+ QQ E++R LE A F+++SDV+LD PQVM KL+ LF+G QP F+LMG+F S+ I A +S+ E L +ILK+P +A +++F+ VPGP DPG+ PR PLP+ TR L + + +TNPCR+R++TQ++V FRDD+ +K+QRHA+ PP S + DI++H KTL+ Q HLCPLPL A PI+W+ D +L L+P P V +L D TEQY+ + +PG F +D SFV YRP+T T EFS V+
Sbjct: 6 VLRACKLQGLSLHADALRRLTDELTNESSLQ--LEDVIYAIKNNIDRSKMTTSVVTLGALESALDTLLAVSAENDFEQIQVFGAFDTPRLHFNTHNNSYELKADAHRR--LHAGPESRIQLLRDRFMSVDLRVKRNRLFAPPSAALANTTEYMELSRIESLLGMTGLRRVIGMLGQDERNRMYLEDFTSRIIIDLTNAVYTDGLFTINCVVLVEGEVIDDVLHVQSMGFPPPETKETSLEVLGGIDPLGVEVSAQQREQIRTLEASDHHATFIVLSDVHLDDPQVMSKLDELFQGLDSVQPT-LFILMGDFMSTSIGGGAGSNSLQDLREYLEDLGNLILKYPGIAENSRFVLVPGPNDPGSSRAFPRHPLPDLCTRELVRKVPNVMCSTNPCRIRYYTQDIVIFRDDLQQKMQRHAILPPMPSEHEEAAMDESDEAGQSVSQTDISKHLAKTLIDQAHLCPLPLMANPINWDFDSSLQLFPTPDVLILGDSTEQYQLGYSSVGVFHPGPFHADFSFVFYRPSTNTTEFSRVE 533
BLAST of mRNA_C-linearis_contig74.15028.1 vs. uniprot
Match: A0A1V9YX49_9STRA (DNA polymerase epsilon subunit n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YX49_9STRA) HSP 1 Score: 379 bits (972), Expect = 1.580e-122 Identity = 211/528 (39.96%), Postives = 324/528 (61.36%), Query Frame = 0
Query: 16 MSTAQAVFRAFKLQGLGIRADAAKAIVRVVDREENADEAVQAIIRSTKARIERNELSSNVVDVDTVSAVVADLTSREEDLAGSSTQMQSAFLRPRLYFDPVRNTLLLEDAASRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESS--RREYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMTAGVFEVAMVGFPPIEAREDTLRALGRADLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVNLDKPQVMEKLEALFEGFQYAQPPPHFVLMGNFCSSPITHAAD--SVAQAAGRFESLCKVILKFPELASSAKFIFVPGPQDPGAGDTLPRPPLPEYFTRSLRENLQHASFATNPCRLRFFTQEMVFFRDDILKKIQRHALFP------PSDADMDITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNGCCSLNPGSFPSDASFVVYRPATQTVEFSHVD 533
M+ A+ VFRAFKLQGL + ADA K ++R +D + + ++ +I + K I+R++L+++VV + + + + L S + + Q+ SA +P+L ++ + T E A R R +H E + ++RERF V +RV RH F P++ ++ +REY++L+ ++SL+G + ++ +LGML Q E +LEDL R+ ++ G++T + VVIVEG++ VF V +G PP E R D++ LG D G V+ QQM ++R+LE + A FVI+SDV+LD PQVM++L+ LFEG+ P FVLMGNF S+P+ + D S+A + L ++LK+P L +KF+ VPGP DPGA LPR PLP+ T + A+ A+NPCR+R+FT+++V RDD+ K++R+ L P D ++ KT++ QGHLCPL LSA+PIHW D +L L+PLP V VLAD+T+Q++ G +++PG F D SF++YRPAT E S +D
Sbjct: 1 MAAAKQVFRAFKLQGLTLHADALKRLLREMDEQPSV--LLEDVIYAIKNSIDRSKLTNSVVTQEALESALDTLLSVSTENDYQAIQVFSALEQPKLRYESLSKTY--EVVADRGRRLHAAPEYRVNLFRERFAAVERRVRRHKTFSKPVMATTSLQREYLELTRIESLLGVSGVKRVLGMLGQDERNNIYLEDLTARIYINTDKTICAPGMYTLNSVVIVEGQVRDDVFHVESMGGPPPEYRADSIAILGGLDPLGVEVSAQQMTQIRELEAQDDLASFVILSDVHLDDPQVMKRLDRLFEGYAPFCPT-LFVLMGNFTSTPVGYGQDAISIADFKELLDDLAAILLKYPSLVEHSKFVLVPGPDDPGAASVLPRHPLPDMCTTDFLRKIPSATMASNPCRIRYFTKDIVILRDDLQAKMRRNCLMPLEAAADDEDRTTTVSRQLVKTVIDQGHLCPLSLSAQPIHWAYDGSLQLFPLPDVLVLADKTDQFQVGYAGVAAIHPGPFYVDYSFMLYRPATAVTELSRID 523
BLAST of mRNA_C-linearis_contig74.15028.1 vs. uniprot
Match: A0A833SQQ2_PHYIN (DNA polymerase epsilon subunit n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SQQ2_PHYIN) HSP 1 Score: 379 bits (972), Expect = 2.090e-122 Identity = 210/532 (39.47%), Postives = 325/532 (61.09%), Query Frame = 0
Query: 22 VFRAFKLQGLGIRADAAKAIVRVVDREENADEAVQAIIRSTKARIERNELSSNVVDVDTVSAVVADLTSREEDLAGSSTQMQSAFLRPRLYFDPVRNTLLLEDAASRKRSMHGPAESKARMYRERFLMVRQRVHRHDLFRPPIIESSRR-EYIKLSPLDSLVGSADLRWLLGMLTQPEEGKYFLEDLVTRLPLDLSNAHKTEGIFTEHCVVIVEGKMTAGVFEVAMVGFPPIEAREDTLRALGRADLFGTGVNPQQMERMRQLEVKATDAMFVIVSDVNLDKPQVMEKLEALFEGFQYAQPPPHFVLMGNFCSSPITHAA--DSVAQAAGRFESLCKVILKFPELASSAKFIFVPGPQDPGAGDTLPRPPLPEYFTRSLRENLQHASFATNPCRLRFFTQEMVFFRDDILKKIQRHALFPPSDADM-----------------DITEHCTKTLLHQGHLCPLPLSARPIHWELDDALSLYPLPHVAVLADRTEQYRWLLNGCCSLNPGSFPSDASFVVYRPATQTVEFSHVD 533
V RA KLQGL + ADA + + ++ E + ++ +I + K I+R++++S+VV ++ + + + L + + Q+ AF PRL+F+ N+ L A R +H E++ ++ R RF+ V RV R+ LF PP + EY++LS ++SL+G + +R ++GML Q E +++LED +R+ +DL+NA T+G+FT +CVV+VEG++ V V +GFPP E +E +L LG D G V+ QQ E++R+LE A F+++SDV+LD P VM KL+ LF+G + QP F+LMG+F S+ I A +S+ E L +ILK+P +A +++FI VPGP DPG+ PR PLP+ TR L + + + +TNPCR+R++TQ++V FRDD+ +K+QRHA+ PP+ ++ DI++H KT++ Q HLCPLPL A PI+W+ D +L L+P P V +L D TEQY+ + +PG F +D SFV YRP+T T EFS V+
Sbjct: 6 VLRACKLQGLSLHADALRRLTEELNNEASLQ--LEDVIYAIKNNIDRSKMTSSVVTLEALESALDTLLAVSAENDYEQIQVFGAFDTPRLHFNMHNNSYDLR--ADTHRRLHAGPEARIQLLRNRFMSVDLRVKRNRLFAPPSAAVANTIEYMELSRIESLLGVSGVRRVIGMLGQDERKRFYLEDFTSRIIIDLTNAAYTDGLFTINCVVLVEGEVIDDVLHVQSMGFPPPETKEASLEGLGGIDPLGVEVSAQQREQIRELEASDHHAAFIVLSDVHLDDPLVMSKLDELFQGLESVQPT-LFILMGDFMSTSIGGGAGSNSLQDLREYLEELGSLILKYPGIAENSRFILVPGPNDPGSSRAFPRHPLPDLCTRELIRKVPNVTCSTNPCRIRYYTQDIVIFRDDLQQKMQRHAILPPTPSEQGEAMDEDGETVHSVSQTDISKHLAKTVIDQAHLCPLPLMANPINWDFDSSLQLFPAPDVLILGDSTEQYQLGYSSIGVFHPGPFHADYSFVFYRPSTNTTEFSRVE 532 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig74.15028.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig74.15028.1 ID=prot_C-linearis_contig74.15028.1|Name=mRNA_C-linearis_contig74.15028.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=534bpback to top |