prot_C-linearis_contig74.15026.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig74.15026.1
Unique Nameprot_C-linearis_contig74.15026.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length160
Homology
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BLAST of mRNA_C-linearis_contig74.15026.1 vs. uniprot
Match: D8LD52_ECTSI (2Fe-2S ferredoxin-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD52_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 9.150e-76
Identity = 120/167 (71.86%), Postives = 133/167 (79.64%), Query Frame = 0 
Query:    1 MTKFTRVLIALVVGVCSVGAFMPSPAALAKSNQRALLAASSHRSSAAATPIRRP--------SALRMGWGDALGKAFANEDMTPQKNPGLKSEPNSCMVTVNGKTVKAVQGQRLRDVVLAAKAKVEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKSKVTIKTKFG 159
            MT FTR+L+ALV+ V S  AF+P P+AL KSN RA+     H  + AAT    P          L MGWGDALGKAFANEDM PQKNPGLK+ PN+CMVTVNGKT++AVQGQRLRDVVLAAKAK+EYGCEKGDCGTCESIVDGRKIRICKAIVPRNK+KV IKTKFG
Sbjct:    1 MTTFTRILVALVLSVSSASAFVPCPSALTKSNHRAI-----HDPAPAATTAAAPRPRYQQHAGPLLMGWGDALGKAFANEDMAPQKNPGLKNAPNTCMVTVNGKTIQAVQGQRLRDVVLAAKAKIEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKTKVNIKTKFG 162
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BLAST of mRNA_C-linearis_contig74.15026.1 vs. uniprot
Match: A0A836CBS9_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBS9_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.250e-29
Identity = 51/99 (51.52%), Postives = 69/99 (69.70%), Query Frame = 0 
Query:   59 MGWGDALGKAFANEDMTPQKNPGLKSEPNSCMVTVNGKTVKAVQGQRLRDVVLAAKAKVEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKSKVTIKTK 157
            MG+GDA   AF+NE+   ++N GLK+ P    V ++GK V+AV GQRL  V  +A  K+ Y C+KGDCGTCE++ DG+KIR+C+ IVP N    T+KTK
Sbjct:    1 MGFGDAFKNAFSNEEFGAKQNAGLKNGPKYVDVIIDGKKVQAVAGQRLSQVCASAGVKISYNCQKGDCGTCEALGDGKKIRVCQTIVPLNAKSFTVKTK 99
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BLAST of mRNA_C-linearis_contig74.15026.1 vs. uniprot
Match: A0A4D9DAQ6_9STRA (2Fe-2S ferredoxin-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAQ6_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.270e-24
Identity = 52/108 (48.15%), Postives = 73/108 (67.59%), Query Frame = 0 
Query:   53 RPSALRMGWGDALGKAFANEDMT-PQKNPGLKSEPNSCMVTVN--GKTVKAVQGQRLRDVVLAAKAKVEYGCEKGDCGTCESIVDGRKIRICKAIVPRN--KSKVTIK 155
            R + + MGW DA+ K F NE+M+ P  N GLK+ P +  +T    GK V AV GQ L+DV  AA+  ++Y C+KG+CGTCE +++G+K+R C  IVPR   K++VTIK
Sbjct:   42 RVAPVHMGWFDAVKKGFENEEMSQPAPNAGLKNGPPTVSITFMPAGKQVTAVAGQSLKDVAQAARIPIKYNCKKGECGTCEVVLNGKKVRTCVGIVPRGARKNEVTIK 149
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BLAST of mRNA_C-linearis_contig74.15026.1 vs. uniprot
Match: A0A7S4JWQ5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JWQ5_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 7.600e-23
Identity = 44/102 (43.14%), Postives = 69/102 (67.65%), Query Frame = 0 
Query:   53 RPSALRMG-WGDALGKAFANED-MTPQKNPGLKSEPNSCMVTVNGKTVKAVQGQRLRDVVLAAKAKVEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKSKV 152
            +PS   +  +G+AL  AF+N+D +  Q+N GLK  P+   VT+NGK VKAV GQ++  V  +A+ K+ Y C+KGDCGTCE  ++GR ++ C+ ++P+ K  +
Sbjct:   32 KPSTTELSIFGNALKGAFSNDDSLGKQQNAGLKGGPDYTEVTINGKQVKAVVGQKVSQVAASARVKISYSCKKGDCGTCEINMNGRVVKACQGVIPKGKCNI 133
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BLAST of mRNA_C-linearis_contig74.15026.1 vs. uniprot
Match: A0A7S2W1C0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W1C0_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 9.400e-20
Identity = 44/97 (45.36%), Postives = 64/97 (65.98%), Query Frame = 0 
Query:   60 GWGDALGKAFAN-EDMTPQKNPGLKSEPN-SCMVTVNGKTVKAVQGQRLRDVVLAAKAKVEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKSKVTI 154
            G+GDA   AFAN E+M   +N GLK+ PN +  V++NGK+VKA+ GQ+L  V   A+ K+ Y C+ G CGTC   V+GR+ + C+A+VP  K  + +
Sbjct:   91 GFGDAFKSAFANDENMGTAQNAGLKNGPNVNESVSINGKSVKAIVGQKLSVVAAQARVKIPYSCKSGSCGTCVVKVNGRQAKACQAVVPSGKCAINV 187
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BLAST of mRNA_C-linearis_contig74.15026.1 vs. uniprot
Match: A0A7S1CYE3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CYE3_CYCTE)

HSP 1 Score: 88.2 bits (217), Expect = 3.330e-19
Identity = 44/93 (47.31%), Postives = 60/93 (64.52%), Query Frame = 0 
Query:   61 WGDALGKAFANEDMTPQKNP---GLKSE-PNSCMVTVNGKTVKAVQGQRLRDVVLAAKAKVEYGCEKGDCGTCESIVDGRKIRICKAIVPRNK 149
            +GDAL  AFAN+    +KN    GLK   P    VT+NGK +KAV GQ++  V  AA+ K+ Y C+KGDCGTCE +++GR  + C+A +P  K
Sbjct:   55 FGDALKGAFANDPTLGKKNKESAGLKGGGPKYDQVTLNGKPIKAVAGQKVSQVAAAARVKITYSCKKGDCGTCEILMNGRMTKACQAKIPAGK 147
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BLAST of mRNA_C-linearis_contig74.15026.1 vs. uniprot
Match: A0A7S2U7E3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7E3_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 5.010e-19
Identity = 45/96 (46.88%), Postives = 63/96 (65.62%), Query Frame = 0 
Query:   53 RPSALRMGWGDALGKAFANED-MTPQKNPGLKSEPN-SCMVTVNGKTVKAVQGQRLRDVVLAAKAKVEYGCEKGDCGTCESIVDGRKIRICKAIVP 146
            RPS     +GDAL  AF+N+D +  Q+N GLK  P  +  VT+NGK+VKA+ GQ++  V  AA+ K+ Y C+ GDCGTC   V+GRK + C+  +P
Sbjct:   44 RPSTSLGLFGDALKGAFSNDDKLGTQQNAGLKGGPKYNDKVTINGKSVKAIVGQKVSVVAAAARVKIPYNCKNGDCGTCMIKVNGRKAKACQMNIP 139
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BLAST of mRNA_C-linearis_contig74.15026.1 vs. uniprot
Match: A0A7R9VC32_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VC32_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.060e-18
Identity = 39/83 (46.99%), Postives = 57/83 (68.67%), Query Frame = 0 
Query:   61 WGDALGKAFAN-EDMTPQKNPGLKSEPNSCMVTVNGKTVKAVQGQRLRDVVLAAKAKVEYGCEKGDCGTCESIVDGRKIRICK 142
            +G+AL  AF N E +  ++N GLK  P+   VT+NGK VKAV GQ++  V  +A+ K+ Y C+KGDCGTCE  ++GR ++ C+
Sbjct:   21 FGNALKNAFGNDESLGERENAGLKGGPDYNEVTINGKPVKAVVGQKVSQVAASARVKITYSCKKGDCGTCEINMNGRVVKACQ 103
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BLAST of mRNA_C-linearis_contig74.15026.1 vs. uniprot
Match: A0A7S1C0U8_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C0U8_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 3.600e-18
Identity = 40/97 (41.24%), Postives = 58/97 (59.79%), Query Frame = 0 
Query:   57 LRMGWGDALGKAFANEDMTPQKNPGLKSEPNSC-MVTVNGKTVKAVQGQRLRDVVLAAKAKVEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKSKV 152
            L+M W      AF NED+ P KN GL + P +   VT+NGK VKA+ GQ++  V  AA+ ++ + C  GDCGTC   ++GR  + C + +PR K  +
Sbjct:   57 LKMNW---FADAFKNEDIAPPKNAGLTNGPETNDNVTINGKKVKAITGQKVAVVASAARVRIPFNCNSGDCGTCVIKMNGRNAKACVSKIPRGKCSI 150
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BLAST of mRNA_C-linearis_contig74.15026.1 vs. uniprot
Match: A0A7R9VKD2_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VKD2_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 9.550e-18
Identity = 39/93 (41.94%), Postives = 57/93 (61.29%), Query Frame = 0 
Query:   61 WGDALGKAFANEDMTPQKNPGLKSEPNSCM-VTVNGKTVKAVQGQRLRDVVLAAKAKVEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKSKV 152
            +G A   AFANED+  ++N GL   P +   V+VNGK V AV GQ++  V  AA+ K+ Y C  GDCGTC   ++ RK++ C+A +P    ++
Sbjct:   42 FGKAFSDAFANEDVGEKQNAGLTGGPRTNENVSVNGKAVSAVVGQKVSVVAAAARVKIPYNCRNGDCGTCTVKMNNRKVKACQATIPAGNCRI 134
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig74.15026.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LD52_ECTSI9.150e-7671.862Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A836CBS9_9STRA1.250e-2951.522Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A4D9DAQ6_9STRA1.270e-2448.152Fe-2S ferredoxin-type domain-containing protein n... [more]
A0A7S4JWQ5_9STRA7.600e-2343.14Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S2W1C0_9STRA9.400e-2045.36Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1CYE3_CYCTE3.330e-1947.31Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2U7E3_9STRA5.010e-1946.88Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]
A0A7R9VC32_9STRA2.060e-1846.99Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S1C0U8_9STRA3.600e-1841.24Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7R9VKD2_9STRA9.550e-1841.94Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0010412Fe-2S ferredoxin-type iron-sulfur binding domainPFAMPF00111Fer2coord: 91..137
e-value: 3.9E-6
score: 26.7
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 88..157
e-value: 3.0E-7
score: 32.2
IPR0060582Fe-2S ferredoxin, iron-sulphur binding sitePROSITEPS001972FE2S_FER_1coord: 121..129
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..159
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..29
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..20
score: 0.555
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 67..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig74contigC-linearis_contig74:555849..558569 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig74.15026.1mRNA_C-linearis_contig74.15026.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig74 554675..558642 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig74.15026.1 ID=prot_C-linearis_contig74.15026.1|Name=mRNA_C-linearis_contig74.15026.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=160bp
MTKFTRVLIALVVGVCSVGAFMPSPAALAKSNQRALLAASSHRSSAAATP
IRRPSALRMGWGDALGKAFANEDMTPQKNPGLKSEPNSCMVTVNGKTVKA
VQGQRLRDVVLAAKAKVEYGCEKGDCGTCESIVDGRKIRICKAIVPRNKS
KVTIKTKFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0010412Fe-2S_ferredoxin-type
IPR012675Beta-grasp_dom_sf
IPR0060582Fe2S_fd_BS
IPR0360102Fe-2S_ferredoxin-like_sf