prot_C-linearis_contig73.14974.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-linearis_contig73.14974.1
Unique Name	prot_C-linearis_contig73.14974.1
Type	polypeptide
Organism	Chordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length	356

Homology

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BLAST of mRNA_C-linearis_contig73.14974.1 vs. uniprot
Match: D7G436_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G436_ECTSI)

HSP 1 Score: 231 bits (588), Expect = 1.370e-66
Identity = 166/399 (41.60%), Postives = 210/399 (52.63%), Query Frame = 0

Query:    1 MLGGGIGHFISRKVTSRPARFFKAGGWDSGSN---LKN----------GMSVFDVVPRTGSTA----------DGSTREISTVESQNIAGRAAVNTTLGAGECDSVAGLNSHPAFE------GQNIRNGNNSRPPSLRRVTEISAAEGPSASRLKTISIDYYYQEEHPGSLENPCEENALKWPHLEFRWPFSTHKDLHKSAINGILAGLVGITAGCATMSYHWAVGVSFVSALLYHVSYRGFMCCVVDDAASAGAVHFVIGSWGLVAAGFTGMEAARVDAGYPSVNVCSRGSQTLVNFFMAVIIFLYVFVCTWIIWGXXXXXXXXXXXXAGKVNSKAEHEGIAKLKDDLIRRDLAVNRHASEKEE---------IN-----DFQLEQLANRVDDLDSHR 356
            M GG IG F+SRKV SR  RFF A  WD G+N   LKN          G    D    T  T            GS  EIST  SQN AGRAA+NT++GA       G      FE          R G++   P      ++   E   A R + + +   +  +   +L    + NA     + F WP+STH +LH +A NGILAGLVGITAGCATMS H A+GVSFVSALLYHVSYRGF+C ++DDA SAGAVH V G+WG++AAGFTGME  R+DAGYP   +CSRG+Q   NF M  II  Y ++CT+I+W              G V +K E     + K+ +  +    NR   + EE         IN     D + EQLANR+ +L+  R
Sbjct:  190 MFGGAIGLFVSRKVRSRGGRFFPAKHWDGGANGSKLKNHTDQPQLNEAGFRSNDPAWMTLGTFLLWLGWYGFNCGSVSEISTTGSQNAAGRAALNTSIGA-----AWGCAFSMLFELGYHRWTPKYRRGDDIEDPLHLAPFDVDGGE--EADRAERVRVAETHLSKK--TLAKIAKHNAEHEKEV-FTWPWSTHINLHGAACNGILAGLVGITAGCATMSPHAAIGVSFVSALLYHVSYRGFICLMIDDAVSAGAVHLVCGAWGVIAAGFTGMEGPRLDAGYPPQALCSRGAQVGTNFVMVAIITAYAYLCTFILWAILRGCRLVDQAEEGVVLAKGEDGKFTEFKNRVADQFTQENRRFKKVEEQLMNQNELGINSRATLDARFEQLANRMAELERTR 578

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BLAST of mRNA_C-linearis_contig73.14974.1 vs. uniprot
Match: A0A6H5JKF7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKF7_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 5.640e-42
Identity = 124/310 (40.00%), Postives = 154/310 (49.68%), Query Frame = 0

Query:    1 MLGGGIGHFISRKVTSRPARFFKAGGW--DSGSNLKNGMSVFDVVPRTGSTAD-----GSTREISTVESQNIAGRAAVNTTLGAGE------------------CDSVAGLNS-----HPAFEGQNIRNGNNSRPPSLRRVTEISAAEGPSASRLKTISIDYYYQEEHPGSLENPCEENALKWPHLEFRWPFSTHKDLHKSAINGILAGLVGITAGCATMSYHWAVGVSFVSALLYHVSYRGFMCCVVDDAASAGAVHFVIGSWGLVAAGFTGMEAARVDAGYPSV-NVCSRGSQTLVNFFMAVIIFLYV 279
            MLGGGIG  +S  V +R  RF  A     +   +      +F V     S        GST +IST E++N AGRAA+NTT+GAGE                  C S  G         P +  +   N      P  R       +      R  T S D         + +   E N+ K     FRW  STHK +H +A NG+L GLVG+TAGCATM    A+ VS VSAL+YHVSYRG +CC +DDA +A AVH V G WG+VAAG T   AARVD G+P   + C+  +Q  VN  MAVIIF YV
Sbjct:  193 MLGGGIGLVLSMVVDNRSDRFIDANPQLVERNKSATLDRRLFKVSHNLLSRGRYGFNCGSTLQISTEETRNAAGRAALNTTIGAGENEHDKHELCYQRAGWAVGCVSSMGFEIMYHWWSPEYRRREFINDPLDYMPQARNTLAGELSSQDPRRRRTTGSTD--------DAKDPEDEHNSGK-----FRWRLSTHKSIHGAACNGVLVGLVGVTAGCATMHPWHAIWVSIVSALVYHVSYRGIICCNIDDAINAAAVHLVGGLWGVVAAGLTVDNAARVDLGFPGQEDGCTPENQAWVNVLMAVIIFGYV 489

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BLAST of mRNA_C-linearis_contig73.14974.1 vs. uniprot
Match: A0A6H5L4K6_9PHAE (Ammonium_transp domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4K6_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 2.870e-35
Identity = 84/185 (45.41%), Postives = 106/185 (57.30%), Query Frame = 0

Query:  183 ITAGCATMSYHWAVGVSFVSALLYHVSYRGFMCCVVDDAASAGAVHFVIGSWGLVAAGFTGMEAARVDAGYPSVNVCSRGSQTLVNFFMAVIIFLYVFVCTWIIWGXXXXXXXXXXXXAGKVNSKAEHEGIAKLKDDLIRRDLAVNRHASEKEE---------IN-----DFQLEQLANRVDDLD 353
            + AGCATMS H A+GVSFVSALLYHVSYRGF+C  +DDA SAGAVH V G+WG+ AAG TGME  R DAGYP   +CSR  Q  +N  M  II LY ++CT+ +W              G V +K E     + K+ +       N+   + EE         IN     D + EQLANR+ +L+
Sbjct:    5 LNAGCATMSPHAAIGVSFVSALLYHVSYRGFICRKIDDAVSAGAVHLVCGAWGVFAAGITGMEGPRQDAGYPPQALCSREVQIGLNALMVAIIALYAYICTFFLWAILRGCRLVDQAEQGVVLAKEEGGKFTEFKNKVSTHFQQENKRFKKVEEQLTSQNQLGINFRATLDERFEQLANRMAELE 189

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BLAST of mRNA_C-linearis_contig73.14974.1 vs. uniprot
Match: D7FL37_ECTSI (Ammonium transporter n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL37_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 7.750e-32
Identity = 101/253 (39.92%), Postives = 132/253 (52.17%), Query Frame = 0

Query:    1 MLGGGIGHFISRKVTSRPARFFKAGGWDSGSNLKNGMSVFD---------VVPRTGSTAD-GSTREISTVESQNIAGRAAVNTTLGAGE-CDSVAGLNSHPAFEGQNIRNGNNSRPP-----------SLR-RVTEISAAEGPSASRLKTISIDYYYQEEHPGSLENPCEENALKWPHLEFRWPFSTHKDLHKSAINGILAGLVGITAGCATMSYHWAVGVSFVSALLYHVSYRGFMCCVVDDAASAGAVHFV 230
            MLGGGIG  +S  V +R  RF  A   D     KN  +  D         ++PR     + GST +IS+ E++N AGRAA+NTT+GA   C S  G      +     R G     P           SL+ +V ++S+  G    R KT     Y        + +P +E+     H  FRW  STHK +H +A NG++ GLVG+TAGCATM    A+ VS VSALLYHVSYRG +CC +DDA +A AVH V
Sbjct:  193 MLGGGIGLVLSIMVENRSDRFIDA---DPELVEKNTSATLDRRLFKVSHNLLPRDRYGFNCGSTLQISSEETRNAAGRAALNTTIGAAVGCVSSMGFEIMYHWWSPKYRRGEFINDPLDYLPQTKNECSLKGKVNQLSSPAGAGPRRRKTTGATDY--------VVDPEDEHN----HGTFRWRLSTHKSIHGAACNGVIVGLVGVTAGCATMLPWHAIWVSIVSALLYHVSYRGIICCKIDDAINAAAVHLV 430

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BLAST of mRNA_C-linearis_contig73.14974.1 vs. uniprot
Match: A0A6H5L500_9PHAE (Ammonium_transp domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L500_9PHAE)

HSP 1 Score: 82.0 bits (201), Expect = 1.670e-13
Identity = 89/255 (34.90%), Postives = 106/255 (41.57%), Query Frame = 0

Query:    1 MLGGGIGHFISRKVTSRPARFFKAGGWDSGSNLKN----------GMSVFDVVPRTGSTA----------DGSTREISTVESQNIAGRAAVNTTLGAGE---------CDSVA-GLNSHPAFEGQNIRNGNN----SRPPSLRRVTEISAAEGPSASRLKTISIDYYYQEEHPGS-LENPCE---------------------ENALKWPHLE-------------FRWPFSTHKDLHKSAINGILAGLVGITAG 186
            MLGG IG FIS+KV SRP RFF    WD    LKN          G    D    T  T            GS  EIST ESQN AGRAA+NT++GAGE         C++    L    +   +  R G +     R PS R       A G + S L  +    +  E   G  +E+P                       EN L    L              F WP+STH +LH +A NGILAGLVGITAG
Sbjct:  166 MLGGAIGLFISKKVRSRPGRFFPPKHWDG--TLKNHTDQPQLNEAGFRSNDATWMTLGTFLLWLGWYGFNCGSVSEISTTESQNAAGRAALNTSIGAGEHWVLLQFYTCEAPNDSLKKSWSITFEYARGGASIQIEHRTPSYRAQRWRCRAWGCAFSMLFELGYHRWSPEYRRGDDIEDPLHVATFDVDGGEEADRAERVRLAENDLGEKTLAIIAKHNAEHEKEAFTWPWSTHINLHGAACNGILAGLVGITAG 418

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BLAST of mRNA_C-linearis_contig73.14974.1 vs. uniprot
Match: A0A6H5JS34_9PHAE (Ammonium_transp domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS34_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 5.940e-12
Identity = 47/118 (39.83%), Postives = 61/118 (51.69%), Query Frame = 0

Query:  166 KDLHKSAINGILAGLVGITAGCATMSYHWAVGVSFVSALLYHVSYRGFMCCVVDDAASAGAVHFVIGSWGLVAAGF--------TGMEAARVDAGYPSVNVCSRGSQTLVNFFMAVII 275
            +DLH +A+NGIL+GLVGITAGCAT      +  + VSA +YH  YR  +   +DDA +A  VH   G WGL  A          T M    +D    S   C RG Q   N   +V++
Sbjct:   17 QDLHSAAVNGILSGLVGITAGCATTDPRLTIVCAVVSAFIYHYGYRLQLHHGLDDAMNAVPVHLYCGIWGLFFAALMYSPGRHDTLMRVYGIDE---SRGDCGRGDQVAANLAFSVVV 131

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BLAST of mRNA_C-linearis_contig73.14974.1 vs. uniprot
Match: A0A7S0TLJ9_HEMAN (Ammonium transporter n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TLJ9_HEMAN)

HSP 1 Score: 67.0 bits (162), Expect = 1.710e-8
Identity = 41/111 (36.94%), Postives = 60/111 (54.05%), Query Frame = 0

Query:  173 INGILAGLVGITAGCATMSYHWAVGVSFVSALLYHVSYRGFMCCVVDDAASAGAVHFVIGSWGLVAAGFTGMEAARVDAGYPSVN-VCSRGSQTLVNFFMAVIIFLYVFVC 282
            +NGILAGLV ITA CA +    A  +  V  ++Y+ ++   +   +DD   A  +H + G WG++A G    +A    AGYP+VN  C RG Q  V    A+II ++   C
Sbjct:  325 LNGILAGLVSITANCAVVDPWMAFIIGCVGGIIYYNAHYLLLRLRIDDPLDAFPIHGLCGLWGVLATGIFCTDANVQYAGYPNVNDACGRGEQFGVQAVGAIIIIVWSVTC 435

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BLAST of mRNA_C-linearis_contig73.14974.1 vs. uniprot
Match: A0A7S0EJS1_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EJS1_9CRYP)

HSP 1 Score: 65.1 bits (157), Expect = 2.760e-8
Identity = 37/93 (39.78%), Postives = 49/93 (52.69%), Query Frame = 0

Query:  173 INGILAGLVGITAGCATMSYHWAVGVSFVSALLYHVSYRGFMCCVVDDAASAGAVHFVIGSWGLVAAGFTGMEAARVDAGYPSVN-VCSRGSQ 264
            +NG+LAGLVGITA CA +    A  + FV+AL+ H  +   +   +DD   A  VH   G WG+ A G    +     AGYP+ N  C  G Q
Sbjct:  188 LNGVLAGLVGITANCAVVDPWMAFIIGFVAALILHGGHFLLIAFRIDDPCDASVVHGFCGMWGIWATGIFCTDKNVQYAGYPNTNEACGSGEQ 280

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BLAST of mRNA_C-linearis_contig73.14974.1 vs. uniprot
Match: A0A651DMF6_9CYAN (Ammonium transporter n=3 Tax=Cyanobacteria TaxID=1117 RepID=A0A651DMF6_9CYAN)

HSP 1 Score: 65.5 bits (158), Expect = 5.040e-8
Identity = 47/129 (36.43%), Postives = 63/129 (48.84%), Query Frame = 0

Query:  160 WPFSTHKDLHKSAINGILAGLVGITAGCATMSYHWAVGVSFVSALLYHVSYRGFMCCVVDDAASAGAVHFVIGSWGLVAAGFTGMEAARVDAGYPSVNVCSRGSQTLVNFFMAVI-IFLYVFVCTWIIW 287
            W  S   DL    INGILAGLV ITAGCA +S+  AV +  +  +L   S   F    +DD   A +VH V G WG +A G   ME                G+  L+   M ++ I L++ VC+ I+W
Sbjct:  334 WTLSGKPDL-SMIINGILAGLVAITAGCAGVSFLGAVVIGLIGGVLVVFSVYFFDSIQIDDPVGAVSVHLVNGMWGTLAVGLFDMEGGLF---------YGHGATQLLAQIMGILTIGLWIVVCSTIVW 452

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BLAST of mRNA_C-linearis_contig73.14974.1 vs. uniprot
Match: A0A2E0HEC6_9GAMM (Ammonium transporter n=1 Tax=Pseudomonadales bacterium TaxID=1891229 RepID=A0A2E0HEC6_9GAMM)

HSP 1 Score: 65.1 bits (157), Expect = 5.780e-8
Identity = 34/70 (48.57%), Postives = 44/70 (62.86%), Query Frame = 0

Query:  171 SAINGILAGLVGITAGCATMSYHWAVGVSFVSALLYHVSYRGFMCCVVDDAASAGAVHFVIGSWGLVAAG 240
            S +NG L GLVGITAGCA+M   +AV   F++ LL   S +  + C VDD   A  VH + G+WG +AAG
Sbjct:  279 SCVNGALGGLVGITAGCASMDPQYAVLTGFMAGLLIVPSTQLLLYCKVDDVVGAIPVHGICGAWGTLAAG 348

The following BLAST results are available for this feature:

BLAST of mRNA_C-linearis_contig73.14974.1 vs. uniprot

BLAST of mRNA_C-linearis_contig73.14974.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G436_ECTSI	1.370e-66	41.60	Ammonium transporter n=1 Tax=Ectocarpus siliculosu...	[more]
A0A6H5JKF7_9PHAE	5.640e-42	40.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L4K6_9PHAE	2.870e-35	45.41	Ammonium_transp domain-containing protein n=1 Tax=...	[more]
D7FL37_ECTSI	7.750e-32	39.92	Ammonium transporter n=1 Tax=Ectocarpus siliculosu...	[more]
A0A6H5L500_9PHAE	1.670e-13	34.90	Ammonium_transp domain-containing protein n=1 Tax=...	[more]
A0A6H5JS34_9PHAE	5.940e-12	39.83	Ammonium_transp domain-containing protein n=1 Tax=...	[more]
A0A7S0TLJ9_HEMAN	1.710e-8	36.94	Ammonium transporter n=2 Tax=Hemiselmis andersenii...	[more]
A0A7S0EJS1_9CRYP	2.760e-8	39.78	Hypothetical protein (Fragment) n=1 Tax=Hanusia ph...	[more]
A0A651DMF6_9CYAN	5.040e-8	36.43	Ammonium transporter n=3 Tax=Cyanobacteria TaxID=1...	[more]
A0A2E0HEC6_9GAMM	5.780e-8	48.57	Ammonium transporter n=1 Tax=Pseudomonadales bacte...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024041	Ammonium transporter AmtB-like domain	PFAM	PF00909	Ammonium_transp	coord: 172..292 e-value: 1.2E-13 score: 50.6
IPR029020	Ammonium/urea transporter	GENE3D	1.10.3430.10		coord: 151..317 e-value: 1.8E-20 score: 75.4
None	No IPR available	PANTHER	PTHR11730	AMMONIUM TRANSPORTER	coord: 171..323
None	No IPR available	PANTHER	PTHR11730:SF6	AMMONIUM TRANSPORTER	coord: 171..323
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 294..356
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 269..293
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..268
None	No IPR available	SUPERFAMILY	111352	Ammonium transporter	coord: 168..292
None	No IPR available	TMHMM	TMhelix		coord: 271..293
None	No IPR available	TMHMM	TMhelix		coord: 188..210
None	No IPR available	TMHMM	TMhelix		coord: 222..244

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-linearis_contig73	contig	C-linearis_contig73:783472..786291 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-linearis_contig73.14974.1	mRNA_C-linearis_contig73.14974.1	Chordaria linearis ClinC8C monoicous	mRNA	C-linearis_contig73 783472..793702 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-linearis_contig73.14974.1 ID=prot_C-linearis_contig73.14974.1|Name=mRNA_C-linearis_contig73.14974.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=356bp
MLGGGIGHFISRKVTSRPARFFKAGGWDSGSNLKNGMSVFDVVPRTGSTA
DGSTREISTVESQNIAGRAAVNTTLGAGECDSVAGLNSHPAFEGQNIRNG
NNSRPPSLRRVTEISAAEGPSASRLKTISIDYYYQEEHPGSLENPCEENA
LKWPHLEFRWPFSTHKDLHKSAINGILAGLVGITAGCATMSYHWAVGVSF
VSALLYHVSYRGFMCCVVDDAASAGAVHFVIGSWGLVAAGFTGMEAARVD
AGYPSVNVCSRGSQTLVNFFMAVIIFLYVFVCTWIIWGVFAIFKLGKLAK
AGKVNSKAEHEGIAKLKDDLIRRDLAVNRHASEKEEINDFQLEQLANRVD
DLDSHR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR024041	NH4_transpt_AmtB-like_dom
IPR029020	Ammonium/urea_transptr