prot_C-linearis_contig73.14973.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig73.14973.1
Unique Nameprot_C-linearis_contig73.14973.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length505
Homology
BLAST of mRNA_C-linearis_contig73.14973.1 vs. uniprot
Match: D8LKH0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKH0_ECTSI)

HSP 1 Score: 383 bits (984), Expect = 4.680e-125
Identity = 199/331 (60.12%), Postives = 242/331 (73.11%), Query Frame = 0
Query:  151 IDDHNFHKVIMEAYFAFEALTEHVHDFVSYLHGRYPEILCIDGCAKICTDDVSTEHFEVARVERDVDTDLQQYLLKLSMISKMVFDGRLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEGDPERGDAGELLRALGDGAISDLSLKTVDDLKNIYRLCYPPGGKGISKYPTKDLLIQCLTRLWESA-GIGDGDRCSKIFIGKPSGATAGVEGLFSNDGVLYGLVFQVARESAADAVDILAHRQVQPCLLITDISCMIEPIAERLHSGLLQGGGALPRNAEGQVCLKELQHVGARAHEFPDLHEVKVPPKEFPSPTVDSASEG--DCLFTVY 478
            I DHNF + + E Y+AFEALT+H ++F SY  GR+PEI+ IDGCAKI TD+  T  F++AR ER VDTD Q  LLK+SMISKMVF  R+R+V+EAAPT    NRISN+M RTARGK+A  G P+ GD GEL++ALGD AI+DLS K+  DLKNIY LC+  G KGIS++  KD L+QC   LW S  G G G+RCSK+FIGK  G TAGVEG F+ DGV+Y  VFQ+A ESAADAVD+ AH  V P L+ITDI CM+ PIAERLH  LL+  G LPR+A+G V L  LQH+GA AHEFPD H VK P + FPSP   SA++   D ++ VY
Sbjct:   36 IADHNFIETLKECYYAFEALTQHPYEFKSYEWGRFPEIVTIDGCAKINTDNTDTSQFQIARTERHVDTDHQHQLLKISMISKMVFPKRVRFVLEAAPTFGFSNRISNLMFRTARGKMADPGSPQTGDLGELVKALGDDAITDLSSKSFADLKNIYTLCFA-GRKGISRFRNKDALVQCFQELWISRDGGGAGERCSKLFIGKQPGTTAGVEGAFTPDGVMYANVFQIAAESAADAVDVSAHFLVPPSLMITDIPCMLAPIAERLHPWLLENEGRLPRDADGVVSLPALQHLGAHAHEFPDEHSVKFPTESFPSPPPSSATDVVVDNIYAVY 365          
BLAST of mRNA_C-linearis_contig73.14973.1 vs. uniprot
Match: A0A6H5JUN3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUN3_9PHAE)

HSP 1 Score: 342 bits (876), Expect = 1.040e-109
Identity = 187/276 (67.75%), Postives = 206/276 (74.64%), Query Frame = 0
Query:  229 MISKMVFDGRLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEGDPERGDAGELLRALGDGAISDLSLKTVDDLKNIYRLCYPPGGKG--------------ISKYPTKDLLIQCLTRLWESAGIGDGDRCSKIFIGKPSGATAGVEGLFSNDGVLYGLVFQVARESAADAVDILAHRQVQPCLLITDISCMIEPIAERLHSGL-LQGGGALPRNAEGQVCLKELQHVGARAHEFPDLHEVKVPPKEFPSPTVDSASEGDC-----LFTVYMAYAAG 484
            MISKMVFD RLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEG PERGDAG+LLRALGDGAI+DLS KT DDL+NIYRLCYPP  +               + ++P  +LLIQCLTR WESAGIGD +RCS+IFIGKPSG T GVEGLF  DGVLY LVFQVARESAAD VDI++HRQ    +       M +    R  S     GGGALPRNAE QVCLKELQHVGARA+EFPDL+EV+VPP EFPSPT  +AS  D      + TVY AYA G
Sbjct:    1 MISKMVFDRRLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEGAPERGDAGDLLRALGDGAITDLSNKTKDDLQNIYRLCYPPPARVSASDFWSRQRTRPCVQRFPPLELLIQCLTRPWESAGIGDRERCSRIFIGKPSGLTTGVEGLFGTDGVLYALVFQVARESAADGVDIISHRQSSTTMPADHGYPMHDCTHCREASPRSTPGGGALPRNAELQVCLKELQHVGARAYEFPDLNEVRVPPMEFPSPTT-TASASDAHPAQSVPTVYAAYAVG 275          
BLAST of mRNA_C-linearis_contig73.14973.1 vs. uniprot
Match: A0A6H5KB28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB28_9PHAE)

HSP 1 Score: 332 bits (852), Expect = 1.880e-107
Identity = 170/257 (66.15%), Postives = 204/257 (79.38%), Query Frame = 0
Query:  145 RAMASR-IDDHNFHKVIMEAYFAFEALTEHVHDFVSYLHGRYPEILCIDGCAKICTDDVSTEHFEVARVERDVDTDLQQYLLKLSMISKMVFDGRLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEGDPERGDAGELLRALGDGAISDLSLKTVDDLKNIYRLCYPPGGKGISKYPTKDLLIQCLTRLWESAGI-GDGDRCSKIFIGKPSGATAG-VEGLFSNDGVLYGLVFQVARESAADAVDILAHRQVQPCLL 398
            R  +SR I+DHNFH +I +AYFAFEAL +    FVS++ GR+ EI CIDGCAKICTDDVS E F++AR ERDVD DL   +LK+S+ISKM F+ RLRWV+EAAP   PHNR+SNVM+RTARG++AP G PE GDAGEL+RALGDGAI+DLS K V DL+NIYRLC+   GKGIS YPTK+LL+QCL +LWESAG  G+G+RCSK+FIGKPSG+TAG VEGLF+ D V+   VFQ+  ES ADAVD+L H  V  C L
Sbjct:   55 RVPSSRSIEDHNFHALIKQAYFAFEALVQPF-GFVSFMRGRWREIFCIDGCAKICTDDVSREQFDIARAERDVDADLHNEMLKMSIISKMGFNARLRWVLEAAPIFGPHNRVSNVMYRTARGRMAPVGSPENGDAGELMRALGDGAITDLSDKPVSDLENIYRLCFI-DGKGISMYPTKELLVQCLQKLWESAGADGEGERCSKLFIGKPSGSTAGGVEGLFTGDRVMVAHVFQITAESPADAVDMLVHLLVTYCTL 309          
BLAST of mRNA_C-linearis_contig73.14973.1 vs. uniprot
Match: A0A6H5JEL5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEL5_9PHAE)

HSP 1 Score: 310 bits (793), Expect = 3.170e-99
Identity = 159/256 (62.11%), Postives = 187/256 (73.05%), Query Frame = 0
Query:  145 RAMASRIDDHNFHKVIMEAYFAFEALTEHVHDFVSYLHGRYPEILCIDGCAKICTDDVSTEHFEVARVERDVDTDLQQYLLKLSMISKMVFDGRLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEGDPERGDAGELLRALGDGAISDLSLKTVDDLKNIYRLCYPPGGKGISKYPTKDLLIQCLTRLWESAGIGDGDRCSKIFIGKPSGATAGVEGLFSNDGVLYGLVFQVARESAADAVDILAHRQVQPCLLIT 400
            R   + I+DH FH +I EAYFAFEAL +H   FVS++HGR+PEI CIDGCAKICTDDVS E F++ARVERDVD +L   +LK+SMISKMVF+  LRWV+EAAP   P                 P G PE GDAGEL+RALGDGAI+DLS K+  DLKNIYRLC+P  GKGIS YPTK+LL QCL +LWE A  G+G+RC K+FIGKPSG+TAGVEGLF+ DGV+   VFQ+  ES ADAVD+L H  V  C L T
Sbjct:    9 RKSINSIEDHKFHALIKEAYFAFEALVQHPFGFVSFMHGRWPEIFCIDGCAKICTDDVSREQFDIARVERDVDANLYNEMLKMSMISKMVFNAHLRWVLEAAPIFGP----------------TPVGSPEDGDAGELMRALGDGAITDLSDKSFGDLKNIYRLCFP-DGKGISMYPTKELLAQCLQKLWELAD-GEGERCLKLFIGKPSGSTAGVEGLFTGDGVMAAHVFQITAESPADAVDMLVHLPVSYCTLST 246          
BLAST of mRNA_C-linearis_contig73.14973.1 vs. uniprot
Match: A0A6H5KB33_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB33_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 1.550e-82
Identity = 138/219 (63.01%), Postives = 159/219 (72.60%), Query Frame = 0
Query:  151 IDDHNFHKVIMEAYFAFEALTEHVHDFVSYLHGRYPEILCIDGCAKICTDDVSTEHFEVARVERDVDTDLQQYLLKLSMISKMVFDGRLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEGDPERGDAGELLRALGDGAISDLSLKTVDDLKNIYRLCYPPGGKGISKYPTKDLLIQCLTRLWESA-GIGDGDRCSKIFIGKPSGATAGVEGLFSNDGV 368
            I DHNF   I +AYFAFE LT+H  DFVSYL+G  PE++ IDGCAK+ +DD +  HF+ AR ER VD DL   LLK+SMISKMVF  RLRWV EA PT    NRISNVM RTARGK  P G  E GDAGELLRAL  G + DL+ KT+DDLKNIYRLC+P GG+GIS Y  K+  I C  +LW  A G  + DRCSK+FI +PSG TAGVEGLF+ DGV
Sbjct:   17 IRDHNFIAAIRDAYFAFEGLTQHPFDFVSYLYGHCPELMSIDGCAKVISDDATLAHFDQARQERLVDIDLGHQLLKMSMISKMVFRTRLRWVTEAPPTFGRRNRISNVMLRTARGKPPPVGSAETGDAGELLRALNGGGMDDLNEKTLDDLKNIYRLCFP-GGRGISAYTKKEDFIGCFQQLWRFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGV 234          
BLAST of mRNA_C-linearis_contig73.14973.1 vs. uniprot
Match: A0A6H5KTI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI3_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 5.150e-73
Identity = 112/160 (70.00%), Postives = 132/160 (82.50%), Query Frame = 0
Query:  145 RAMASRIDDHNFHKVIMEAYFAFEALTEHVHDFVSYLHGRYPEILCIDGCAKICTDDVSTEHFEVARVERDVDTDLQQYLLKLSMISKMVFDGRLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEGDPERGDAGELLRALGDGAISDLSLKTVDDLKNI 304
            R   + I+DHNF  +I +AYFAFEAL +H   FVS++HGR+PEI CIDGCAKICTDDVS E F+ AR ERDVD DL   +LK+SMISKMVF+ RLRWV+EAAP + PHNR+SNVMHRTARG++AP G PE GDAGEL+RALGDGAI+DLS K+V DLKNI
Sbjct:    9 RKSINSIEDHNFRALIKQAYFAFEALVQHPFGFVSFMHGRWPEIFCIDGCAKICTDDVSREQFDFARAERDVDADLHNEMLKMSMISKMVFNARLRWVLEAAPILGPHNRVSNVMHRTARGRMAPVGSPENGDAGELMRALGDGAITDLSDKSVSDLKNI 168          
BLAST of mRNA_C-linearis_contig73.14973.1 vs. uniprot
Match: A0A6H5L6Z2_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z2_9PHAE)

HSP 1 Score: 246 bits (628), Expect = 5.610e-70
Identity = 116/150 (77.33%), Postives = 129/150 (86.00%), Query Frame = 0
Query:    1 MAQLRVITAVYKFPVDEPQLKPETLGRKKIHVNACFCPGCGESYRQLADGQATLLGQGTHGGAELRVVEVERKGCKRCNVAGWAGDDIYEDGVFNYNNKVVLELPLLYAIRRVVSAGTPVSTWARTFVERLLGDVRWLDASDENRAMASR 150
            MAQLRVITAVYKFPV EP+LKP T GRK+IHVNACFC GCG+ Y++L DG+ATLLGQ T+GGAELRVV+VERKGCKRC + GWAGDDIY DGVFNYNN VVL L LLY IRR VSA TPVSTW RTF+  LL D+ WLDAS+ENRA+ASR
Sbjct:  539 MAQLRVITAVYKFPVAEPELKPGTYGRKRIHVNACFCTGCGQKYQELPDGEATLLGQRTNGGAELRVVKVERKGCKRCKLIGWAGDDIYADGVFNYNNNVVLALSLLYTIRRAVSADTPVSTWVRTFLRPLLDDLTWLDASNENRALASR 688          
BLAST of mRNA_C-linearis_contig73.14973.1 vs. uniprot
Match: A0A6H5JL59_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL59_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 8.490e-57
Identity = 101/173 (58.38%), Postives = 123/173 (71.10%), Query Frame = 0
Query:  227 LSMISKMVFDGRLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEGDPERGDAGELLRALGDGAISDLSLKTVDDLKNIYRLCYPPGGKGISKYPTKDLLIQCLTRLWESAGI-GDGDRCSKIFIGKPSGATAGVEGLFSNDGVLYGLVFQVARESAADAVDILAHRQVQPCLL 398
            +SMI KM+F+ RLRWV+EAAPT  PHNR+SNVMHRTARG++AP G PE GDAGEL+RALGDGA++DLS K+                         +LL+QCL +LWESAG  G+ +RCSK+FIGKPSG+TAGVEGLF+ DGV+   VFQ+  ES ADAVD+L H  V  C L
Sbjct:    1 MSMIYKMIFNARLRWVLEAAPTFGPHNRVSNVMHRTARGRMAPVGSPENGDAGELMRALGDGAVTDLSDKS-------------------------ELLVQCLQKLWESAGADGERERCSKLFIGKPSGSTAGVEGLFTGDGVMVAHVFQITAESPADAVDMLVHLLVSYCAL 148          
BLAST of mRNA_C-linearis_contig73.14973.1 vs. uniprot
Match: A0A6H5L2J5_9PHAE (CxC4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2J5_9PHAE)

HSP 1 Score: 199 bits (505), Expect = 8.800e-57
Identity = 92/142 (64.79%), Postives = 110/142 (77.46%), Query Frame = 0
Query:    1 MAQLRVITAVYKFPVDEPQLKPETLGRKKIHVNACFCPGCGESYRQLADGQATLLGQGTHGGAELRVVEVERKGCKRCNVAGWAGDDIYEDGVFNYNNKVVLELPLLYAIRRVVSAGTPVSTWARTFVERLLGDVRWLDASD 142
            MAQLR+I++VY+FPV EP LK  T GR+ IHVNAC C GCGE Y +L DG+A LLGQG     +LRVV VERK C+RCN+ GWAGD+IYEDGVFNYN  VV+EL +LYAIRR VSAG PVSTW + F+E LL D+ WL + +
Sbjct:  109 MAQLRMISSVYRFPVCEPALKNGTYGRQTIHVNACLCTGCGEPYLKLPDGEAILLGQGARRKTDLRVVTVERKECRRCNLKGWAGDNIYEDGVFNYNGNVVIELSILYAIRRAVSAGQPVSTWVKIFLEPLLDDMEWLSSEE 250          
BLAST of mRNA_C-linearis_contig73.14973.1 vs. uniprot
Match: A0A6H5JY55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY55_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 1.370e-56
Identity = 104/169 (61.54%), Postives = 120/169 (71.01%), Query Frame = 0
Query:  227 LSMISKMVFDGRLRWVVEAAPTVSPHNRISNVMHRTARGKLAPEGDPERGDAGELLRALGDGAISDLSLKTVDDLKNIYRLCYPPGGKGISKYPTKDLLIQCLTRLWESA-GIGDGDRCSKIFIGKPSGATAGVEGLFSNDGVLYGLVFQVARESAADAVDILAHRQVQ 394
            +SMISKMVF  RLRWV EA PT    NRISNVM RTARGK  P G PE GDAGELLRAL  G + DL+ KT+DDLKNIYRLC+P GG+GIS Y  K+  I C  +LW  A G  + DRCSK+FI +PSG TAGVEGLF+ DGV+   + QV  ES AD VD + H  V+
Sbjct:    1 MSMISKMVFRTRLRWVTEAPPTFGRRNRISNVMLRTARGKPPPVGSPETGDAGELLRALNGGGMDDLNEKTLDDLKNIYRLCFP-GGRGISAYTKKEDFIGCFQQLWRFALGPDEADRCSKVFIVRPSGKTAGVEGLFTPDGVVNSHLLQVTSESPADVVDTMRHLAVR 168          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig73.14973.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKH0_ECTSI4.680e-12560.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JUN3_9PHAE1.040e-10967.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KB28_9PHAE1.880e-10766.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JEL5_9PHAE3.170e-9962.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KB33_9PHAE1.550e-8263.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KTI3_9PHAE5.150e-7370.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6Z2_9PHAE5.610e-7077.33CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JL59_9PHAE8.490e-5758.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L2J5_9PHAE8.800e-5764.79CxC4 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JY55_9PHAE1.370e-5661.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040648HMG domain-containing protein 3, CxC4 like cysteine clusterPFAMPF18717CxC4coord: 34..130
e-value: 4.0E-11
score: 42.9
IPR039598HMG domain-containing protein 3PANTHERPTHR17609FAMILY NOT NAMEDcoord: 89..408

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig73contigC-linearis_contig73:728898..735508 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig73.14973.1mRNA_C-linearis_contig73.14973.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig73 727507..735586 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig73.14973.1 ID=prot_C-linearis_contig73.14973.1|Name=mRNA_C-linearis_contig73.14973.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=505bp
MAQLRVITAVYKFPVDEPQLKPETLGRKKIHVNACFCPGCGESYRQLADG
QATLLGQGTHGGAELRVVEVERKGCKRCNVAGWAGDDIYEDGVFNYNNKV
VLELPLLYAIRRVVSAGTPVSTWARTFVERLLGDVRWLDASDENRAMASR
IDDHNFHKVIMEAYFAFEALTEHVHDFVSYLHGRYPEILCIDGCAKICTD
DVSTEHFEVARVERDVDTDLQQYLLKLSMISKMVFDGRLRWVVEAAPTVS
PHNRISNVMHRTARGKLAPEGDPERGDAGELLRALGDGAISDLSLKTVDD
LKNIYRLCYPPGGKGISKYPTKDLLIQCLTRLWESAGIGDGDRCSKIFIG
KPSGATAGVEGLFSNDGVLYGLVFQVARESAADAVDILAHRQVQPCLLIT
DISCMIEPIAERLHSGLLQGGGALPRNAEGQVCLKELQHVGARAHEFPDL
HEVKVPPKEFPSPTVDSASEGDCLFTVYMAYAAGGARAQRSSAPGLPCPP
PTCW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040648HMGXB3_CxC4
IPR039598HMGXB3