prot_C-linearis_contig73.14970.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig73.14970.1
Unique Nameprot_C-linearis_contig73.14970.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length178
Homology
BLAST of mRNA_C-linearis_contig73.14970.1 vs. uniprot
Match: D7FX58_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX58_ECTSI)

HSP 1 Score: 340 bits (871), Expect = 6.710e-118
Identity = 167/177 (94.35%), Postives = 174/177 (98.31%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKFKDTVRRKLIEEVEGTSVGSLGFVITVMSVTDDQIHMGTIEFDTGFANVVVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGAELKAVGSIKDDFLGLISGPV 177
            MFYLKEL+RPML+PPSDFGPK KDT+RRKLIEEVEGTSVGSLGFVITV +V+DDQI MGTIEFDTGFANV+VVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGAELKAVGSIKDDFLGL+SGPV
Sbjct:    1 MFYLKELRRPMLVPPSDFGPKLKDTIRRKLIEEVEGTSVGSLGFVITVTNVSDDQIQMGTIEFDTGFANVLVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGAELKAVGSIKDDFLGLVSGPV 177          
BLAST of mRNA_C-linearis_contig73.14970.1 vs. uniprot
Match: A0A835YX29_9STRA (S1 motif domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX29_9STRA)

HSP 1 Score: 229 bits (583), Expect = 5.570e-74
Identity = 117/177 (66.10%), Postives = 140/177 (79.10%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKFKDTVRRKLIEEVEGTSVGSLGFVITVMSVT--DDQIHMGTIEFDTGFANVVVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAG-GYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGAELKAVGSIKDDFLGLIS 174
            MFYLK LK+ +L+ P  FGP   + V R L+E+VEG S+G+ GFVI+V S    +  + MGTIE+DTG AN++  Y AICFRPF NEVLDA VS+VT+LGFFAEVGPLE+FVSR  MP+DIA  GYD VGDMWVS ED + EIK GCGVRLRIIG+TV AELKAVGS+KDD+LGL+S
Sbjct:    1 MFYLKTLKKDLLLEPQFFGPNLHEVVGRLLLEQVEGMSLGNDGFVISVFSQNSANTSMEMGTIEYDTGAANIICTYEAICFRPFRNEVLDATVSNVTDLGFFAEVGPLEIFVSRFNMPEDIANTGYDSVGDMWVS-EDKEVEIKKGCGVRLRIIGITVEAELKAVGSMKDDYLGLVS 176          
BLAST of mRNA_C-linearis_contig73.14970.1 vs. uniprot
Match: A0A6S9LV75_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9LV75_HETAK)

HSP 1 Score: 209 bits (532), Expect = 3.270e-66
Identity = 101/175 (57.71%), Postives = 135/175 (77.14%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKFKDTVRRKLIEEVEGTSVGSLGFVITVMSVTDDQIHMGTIEFDTGFANVVVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTV-GAELKAVGSIKDDFLGLIS 174
            MF+LK+L R + +PP+  GPK K+T+RR+LIEEVEG +VG LG+VITV  + D+ I  G IE+D+GF    VVY AICFRPF +EVLDA +S VTELGFFA+VGPL VFVSR  MP D+  GYDP  ++W  SED + E+++G GVRLRI+G++V  A++ A+G++ DD+LGL+S
Sbjct:    1 MFFLKQLTRELQLPPAFLGPKLKETIRRRLIEEVEGQAVGKLGYVITVTEMKDEAISQGLIEYDSGFVTFNVVYSAICFRPFRDEVLDATISSVTELGFFADVGPLTVFVSRHAMPADLQEGYDPARELW-QSEDREVELRAGAGVRLRIMGLSVDAADISAIGTVADDYLGLVS 174          
BLAST of mRNA_C-linearis_contig73.14970.1 vs. uniprot
Match: A0A7S2Y2T3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y2T3_9STRA)

HSP 1 Score: 199 bits (506), Expect = 2.920e-62
Identity = 100/175 (57.14%), Postives = 131/175 (74.86%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKFKDTVRRKLIEEVEGTSVGSLGFVITVMSVTDDQIHMGTIEFDTGFANVVVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTV-GAELKAVGSIKDDFLGLIS 174
            MF+LKEL R +L+PP+  GPK K+T+RR+LIEEVEGT +G  G+VITV  V ++ +  G I  + G     + Y AICFRPF  EVLDA V+ VTELGFFAEVGPL+VFVSR  MP D+  G+D   ++WVS ED + E++ GCGVRLRI+G++V  A++ A+G+IKDD+LGLIS
Sbjct:    1 MFFLKELTRELLLPPAYLGPKIKETIRRRLIEEVEGTCLGKYGYVITVTEVKEEGMKTGVISNEFGEVIFHISYDAICFRPFKGEVLDANVTVVTELGFFAEVGPLQVFVSRHAMPQDLQEGFDAANEVWVS-EDKEVELRQGCGVRLRIMGLSVDAADISAIGTIKDDYLGLIS 174          
BLAST of mRNA_C-linearis_contig73.14970.1 vs. uniprot
Match: K3XAJ8_GLOUD (Uncharacterized protein n=27 Tax=Oomycota TaxID=4762 RepID=K3XAJ8_GLOUD)

HSP 1 Score: 195 bits (495), Expect = 1.240e-60
Identity = 98/175 (56.00%), Postives = 129/175 (73.71%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKFKDTVRRKLIEEVEGTSVGSLGFVITVMSVTDDQIHMGTIEFDTGFANVVVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGA-ELKAVGSIKDDFLGLIS 174
            MF+LK+L R +L+ P  FGPK  D +R +LIEEVEGTS+G  G+VITV  V D+ I  G I+ ++GF    + YRAI FRPF N+VLDA V+ V +LGFFA+VGPL+VFVSR  MP D+  GYD   + W+S +D + EI+ GCGVRL+I+GV+V   E+ A+G+IKDD+LGLIS
Sbjct:    1 MFFLKQLSRDLLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGVIQDNSGFVCFNIRYRAILFRPFKNQVLDAVVTVVNQLGFFADVGPLQVFVSRHAMPTDLNNGYDHENNAWIS-DDREVEIRKGCGVRLKIMGVSVDVTEINAIGTIKDDYLGLIS 174          
BLAST of mRNA_C-linearis_contig73.14970.1 vs. uniprot
Match: A0A024TU38_9STRA (Uncharacterized protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TU38_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.310e-57
Identity = 95/175 (54.29%), Postives = 127/175 (72.57%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKFKDTVRRKLIEEVEGTSVGSLGFVITVMSVTDDQIHMGTIEFDTGFANVVVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGA-ELKAVGSIKDDFLGLIS 174
            MF+LK+LKR +L+ P  FGPK  D +R +LIEEVEGTS+G  G+VI V  V D+ I  G I+ ++GF    + YRAI FRPF NEVLDA V+ V +LGFFAEVGPL+VFVSR  M  D+  GYD     W+S +D + EI+ G GVRL+I+GV++   E++A+G+IKD++LG+IS
Sbjct:    1 MFFLKQLKRELLLHPMHFGPKLHDIIRLRLIEEVEGTSLGKFGYVIAVTEVRDEDIGQGVIQDNSGFVCFNIAYRAILFRPFKNEVLDAVVTVVNQLGFFAEVGPLQVFVSRHAMSTDLNEGYDHEQSAWIS-QDREVEIRKGVGVRLKIMGVSIDVTEIQAIGTIKDNYLGVIS 174          
BLAST of mRNA_C-linearis_contig73.14970.1 vs. uniprot
Match: A0A024GUM2_9STRA (ING domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GUM2_9STRA)

HSP 1 Score: 192 bits (489), Expect = 1.640e-56
Identity = 96/175 (54.86%), Postives = 127/175 (72.57%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKFKDTVRRKLIEEVEGTSVGSLGFVITVMSVTDDQIHMGTIEFDTGFANVVVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGA-ELKAVGSIKDDFLGLIS 174
            MF+LK+L R +L+ P  FGPK  D +R +LIEEVEGTS+G  G+VITV  V D+ I  G I+  +G+    + YRAI FRPF N+VLDA VS V +LGFFA+VGPL+VFVSR  MP D+  GYD   + W+S +D + EI+  CG+RLRI+GV++   E+ A+G+IKDD+LGLIS
Sbjct:  265 MFFLKQLSRDLLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGVIQDSSGYVCFNIRYRAILFRPFKNQVLDAVVSVVNQLGFFADVGPLQVFVSRHAMPTDLNNGYDHENNAWIS-DDREVEIRKSCGIRLRIMGVSIDVTEINAIGTIKDDYLGLIS 438          
BLAST of mRNA_C-linearis_contig73.14970.1 vs. uniprot
Match: A0A7S2HLJ0_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HLJ0_9STRA)

HSP 1 Score: 183 bits (465), Expect = 4.330e-56
Identity = 91/178 (51.12%), Postives = 126/178 (70.79%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKFKDTVRRKLIEEVEGTSVGSLGFVITVMSVTDD-QIHMGTIEFDTGFANVVVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGA-ELKAVGSIKDDFLGLISGP 176
            MF+ K+L+  +LI P   GPK K T+RR+LI+E+EG+ +  +G+V+ V  + D   I  G IE++TG  + +V Y A+ FRPF NEVLDA V+ V +LGFF + GPL+VFVSR  +P DI  G+DP  DMWVS ED + EIK GC VRLRI+G+ + A ++ AVG+++DDFLG+I  P
Sbjct:    1 MFFYKKLRHEVLISPEYLGPKLKQTIRRRLIDEIEGSCINKIGYVVCVTDINDTTDIEAGLIEYETGHTSFMVTYGAVLFRPFKNEVLDATVTTVNQLGFFCKAGPLQVFVSRYNLPGDIREGFDPNQDMWVS-EDGEVEIKRGCVVRLRIMGLAMEASKINAVGNMRDDFLGVIELP 177          
BLAST of mRNA_C-linearis_contig73.14970.1 vs. uniprot
Match: A0A425DP05_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425DP05_9STRA)

HSP 1 Score: 180 bits (457), Expect = 3.650e-54
Identity = 91/171 (53.22%), Postives = 123/171 (71.93%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKFKDTVRRKLIEEVEGTSVGSLGFVITVMSVTDDQIHMGTIEFDTGFANVVVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTVGA-ELKAVGSIKDDFL 170
            MF+LK+LKR +L+ P  FGPK  D +R +LIEEVEGTS+G  G+VI V  V D+ I  G I+ ++G+    + YRAI FRPF NEVLDA V+ V +LGFFAEVGPL+VFVSR  M  D+  GYD     W+S +D + EI+ G GVRL+I+GV++   E++A+G+IKD++L
Sbjct:    1 MFFLKQLKRELLLHPMHFGPKLHDIIRLRLIEEVEGTSLGKFGYVIAVTEVRDEDIGQGVIQDNSGYVCFNIAYRAILFRPFKNEVLDAVVTVVNQLGFFAEVGPLQVFVSRHAMSTDLNEGYDHEQSAWIS-QDREVEIRKGVGVRLKIMGVSIDVTEIQAIGTIKDNYL 170          
BLAST of mRNA_C-linearis_contig73.14970.1 vs. uniprot
Match: A0A225WVR4_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WVR4_9STRA)

HSP 1 Score: 172 bits (437), Expect = 6.350e-52
Identity = 86/155 (55.48%), Postives = 113/155 (72.90%), Query Frame = 0
Query:    1 MFYLKELKRPMLIPPSDFGPKFKDTVRRKLIEEVEGTSVGSLGFVITVMSVTDDQIHMGTIEFDTGFANVVVVYRAICFRPFVNEVLDAAVSHVTELGFFAEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRIIGVTV 155
            MF+LK+L R +L+ P  FGPK  D +R +LIEEVEGTS+G  G+VITV  V D+ I  G I+ ++GF    + YRAI FRPF N+VLDA V+ V +LGFFA+VGPL+VFVSR  MP D+  GYD   + W+S +D + EI+ GCGVRL+I+GV+V
Sbjct:    1 MFFLKQLSRDLLLHPMHFGPKLHDIIRLRLIEEVEGTSMGKYGYVITVTEVRDEDIGKGVIQDNSGFVCFNIRYRAILFRPFKNQVLDAVVTVVNQLGFFADVGPLQVFVSRHAMPTDLNNGYDHESNAWIS-DDREVEIRKGCGVRLKIMGVSV 154          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig73.14970.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX58_ECTSI6.710e-11894.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YX29_9STRA5.570e-7466.10S1 motif domain-containing protein n=1 Tax=Tribone... [more]
A0A6S9LV75_HETAK3.270e-6657.71Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2Y2T3_9STRA2.920e-6257.14Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
K3XAJ8_GLOUD1.240e-6056.00Uncharacterized protein n=27 Tax=Oomycota TaxID=47... [more]
A0A024TU38_9STRA1.310e-5754.29Uncharacterized protein n=8 Tax=Saprolegniaceae Ta... [more]
A0A024GUM2_9STRA1.640e-5654.86ING domain-containing protein n=1 Tax=Albugo candi... [more]
A0A7S2HLJ0_9STRA4.330e-5651.12Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A425DP05_9STRA3.650e-5453.22Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
A0A225WVR4_9STRA6.350e-5255.48Uncharacterized protein n=1 Tax=Phytophthora megak... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036898RNA polymerase Rpb7-like, N-terminal domain superfamilyGENE3D3.30.1490.120coord: 1..83
e-value: 1.7E-23
score: 84.7
IPR036898RNA polymerase Rpb7-like, N-terminal domain superfamilySUPERFAMILY88798N-terminal, heterodimerisation domain of RBP7 (RpoE)coord: 1..80
NoneNo IPR availableGENE3D2.40.50.140coord: 84..173
e-value: 8.6E-25
score: 88.5
NoneNo IPR availablePANTHERPTHR12709:SF4DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB7coord: 1..171
NoneNo IPR availablePANTHERPTHR12709DNA-DIRECTED RNA POLYMERASE II, IIIcoord: 1..171
IPR005576RNA polymerase Rpb7-like , N-terminalPFAMPF03876SHS2_Rpb7-Ncoord: 13..79
e-value: 6.2E-10
score: 39.3
IPR003029S1 domainPFAMPF00575S1coord: 80..156
e-value: 7.0E-9
score: 35.9
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 81..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig73contigC-linearis_contig73:693936..697375 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig73.14970.1mRNA_C-linearis_contig73.14970.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig73 693245..697629 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig73.14970.1 ID=prot_C-linearis_contig73.14970.1|Name=mRNA_C-linearis_contig73.14970.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=178bp
MFYLKELKRPMLIPPSDFGPKFKDTVRRKLIEEVEGTSVGSLGFVITVMS
VTDDQIHMGTIEFDTGFANVVVVYRAICFRPFVNEVLDAAVSHVTELGFF
AEVGPLEVFVSRLGMPDDIAGGYDPVGDMWVSSEDSDTEIKSGCGVRLRI
IGVTVGAELKAVGSIKDDFLGLISGPV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036898RNA_pol_Rpb7-like_N_sf
IPR005576Rpb7-like_N
IPR003029S1_domain
IPR012340NA-bd_OB-fold