prot_C-linearis_contig73.14964.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig73.14964.1
Unique Nameprot_C-linearis_contig73.14964.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length155
Homology
BLAST of mRNA_C-linearis_contig73.14964.1 vs. uniprot
Match: D7FX78_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX78_ECTSI)

HSP 1 Score: 293 bits (749), Expect = 4.740e-100
Identity = 143/150 (95.33%), Postives = 148/150 (98.67%), Query Frame = 0
Query:    1 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQNTPMPCELTAYTDRSFTFQLSTPQTTWMLKRCAGIEKGGARAGHEYSGKVGLKALYEIAKVKNAETHSVLLPLESVCKSVRATALSMGLEIVDDRESLKRK 150
            MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKH+VQNTPMPCELTAYTDRSFTF+LSTPQTTWMLKRCAG+EKGG+RAGHEY GKVGLKALYEIAKVKNAE HSVLLPLESVCKSVRATALSMGLEIVDDRESLK+K
Sbjct:    1 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHIVQNTPMPCELTAYTDRSFTFKLSTPQTTWMLKRCAGVEKGGSRAGHEYCGKVGLKALYEIAKVKNAEDHSVLLPLESVCKSVRATALSMGLEIVDDRESLKQK 150          
BLAST of mRNA_C-linearis_contig73.14964.1 vs. uniprot
Match: A0A835Z8X1_9STRA (Ribosomal protein L11 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8X1_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.490e-56
Identity = 89/149 (59.73%), Postives = 114/149 (76.51%), Query Frame = 0
Query:    1 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQNTPMPCELTAYTDRSFTFQLSTPQTTWMLKRCAGIEKGGARAGHEYSGKVGLKALYEIAKVKNAETHSVLLPLESVCKSVRATALSMGLEIVDDRESLKR 149
            MS VRTVRMRVPAG AKPGPAIGQALGPLGINMM+FCK FN +T+H++ +TP P  L+A+++R+F F + TP T+W+LKRCA I+KG    G E  G VG KA+YEIAK+K  + H   LPL+ + +SV +TALSMGL+I DD ++  R
Sbjct:    1 MSLVRTVRMRVPAGMAKPGPAIGQALGPLGINMMDFCKSFNAKTQHLLPDTPTPVVLSAFSNRTFEFVIKTPPTSWLLKRCAKIDKGAKMPGLEIVGSVGTKAIYEIAKIKARDQHLDWLPLDGIARSVASTALSMGLKIRDDMKAEDR 149          
BLAST of mRNA_C-linearis_contig73.14964.1 vs. uniprot
Match: A0A7S2CHZ2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CHZ2_9STRA)

HSP 1 Score: 179 bits (454), Expect = 1.540e-54
Identity = 85/144 (59.03%), Postives = 108/144 (75.00%), Query Frame = 0
Query:    1 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQNTPMPCELTAYTDRSFTFQLSTPQTTWMLKRCAGIEKGGARAGHEYSGKVGLKALYEIAKVKNAETHSVLLPLESVCKSVRATALSMGLEIVDDR 144
            MS VRTVR+RVPAG AKPGPAIGQALGPLGINMMEFCK FN+ T  +V++TP+P  LTAY +R+FTF   +P TTW LK  AG+EKG  R GHE  G+V LK ++EIAK+K  + H   +PL  +C+S+  TA SMG+ ++ D+
Sbjct:   12 MSIVRTVRLRVPAGNAKPGPAIGQALGPLGINMMEFCKAFNDSTTKLVKDTPIPVLLTAYANRTFTFVNKSPPTTWFLKNAAGLEKGTTRPGHEMVGEVTLKQVFEIAKIKQQDEHLAHVPLRGLCRSIVGTAGSMGITVISDQ 155          
BLAST of mRNA_C-linearis_contig73.14964.1 vs. uniprot
Match: A0A7S2STT6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2STT6_9STRA)

HSP 1 Score: 173 bits (439), Expect = 6.860e-53
Identity = 81/140 (57.86%), Postives = 106/140 (75.71%), Query Frame = 0
Query:    5 RTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQNTPMPCELTAYTDRSFTFQLSTPQTTWMLKRCAGIEKGGARAGHEYSGKVGLKALYEIAKVKNAETHSVLLPLESVCKSVRATALSMGLEIVDDR 144
            R V++RVPAG+AKPGPAIGQALGPLGINMMEFCK FN+ T+ +  NTP+P  LTA T+R+FTF   +P T+W LKRCAGI+KG  R GH   G V ++ +YEIAK K  + H   L L+S+C+S+ A+A SMG+++ +DR
Sbjct:    6 RIVKLRVPAGSAKPGPAIGQALGPLGINMMEFCKAFNQATEQLAPNTPIPVRLTAMTNRTFTFVTKSPPTSWFLKRCAGIDKGAQRPGHSVVGSVSVQQVYEIAKAKQQDDHLQHLHLKSLCQSIIASATSMGIQVTNDR 145          
BLAST of mRNA_C-linearis_contig73.14964.1 vs. uniprot
Match: A0A7R9UAQ2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAQ2_9STRA)

HSP 1 Score: 172 bits (437), Expect = 1.010e-51
Identity = 83/150 (55.33%), Postives = 108/150 (72.00%), Query Frame = 0
Query:    5 RTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQNTPMPCELTAYTDRSFTFQLSTPQTTWMLKRCAGIEKGGARAGHEYSGKVGLKALYEIAKVKNAETHSVLLPLESVCKSVRATALSMGLEIVDDRESLKRKDQDL 154
            R V++ VPAG AKPGPAIGQ+LGPLG+NM EFCK FN +T    QN P+P  L AY DRSF   L +P+T+W LK+CAGIEKG A+ G+E  G V LK +Y IAK+K  + H  L PL+S+C+SV  +A S+GLE+VDDR+  +  ++ L
Sbjct:   57 RLVKLLVPAGAAKPGPAIGQSLGPLGLNMAEFCKTFNAKTSSYEQNVPIPVVLFAYEDRSFELWLKSPRTSWFLKQCAGIEKGAAKPGYETVGHVTLKEVYHIAKLKQRDHHLWLTPLQSICRSVLGSAASLGLEVVDDRQQSQASEEPL 206          
BLAST of mRNA_C-linearis_contig73.14964.1 vs. uniprot
Match: A0A6V2RJT6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2RJT6_HETAK)

HSP 1 Score: 168 bits (426), Expect = 7.130e-51
Identity = 82/142 (57.75%), Postives = 101/142 (71.13%), Query Frame = 0
Query:    5 RTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQNTPMPCELTAYTDRSFTFQLSTPQTTWMLKRCAGIEKGGARAGHEYSGKVGLKALYEIAKVKNAETHSVLLPLESVCKSVRATALSMGLEIVDDRES 146
            R V +RV AG AKPGPAIGQALGPLGINMMEFCK FNE TK +    P P +L+AY DRSF F   +P T+W LKRCAGI+KG  R G+E +G V LK +YEI   K  + H   LP E++ +S+  +A SMGL++VDDRE+
Sbjct:    7 RVVNLRVAAGVAKPGPAIGQALGPLGINMMEFCKAFNERTKDLTPEIPTPVKLSAYEDRSFDFTTQSPPTSWFLKRCAGIQKGSGRPGYEAAGTVTLKQVYEIVLAKQKDAHLWHLPPEALARSIIGSAASMGLKVVDDRET 148          
BLAST of mRNA_C-linearis_contig73.14964.1 vs. uniprot
Match: A0A7S1BAR1_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BAR1_9STRA)

HSP 1 Score: 160 bits (406), Expect = 7.320e-48
Identity = 77/145 (53.10%), Postives = 107/145 (73.79%), Query Frame = 0
Query:    1 MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQNTPMPCELTAYTDRSFTFQLSTPQTTWMLKRCAGIEKGGARAGHEYS-GKVGLKALYEIAKVKNAETHSVLLPLESVCKSVRATALSMGLEIVDDR 144
            MS+VR+V +RVPA  A+PGPAIGQALGPLG+NM EFCK+FNE T   V +  +P  L A+ DR+F F + +P T+ M+KR AG+EKG  R G + + G + ++A+YEIAK+K  +TH   +P+ SV KS+  TALSMG+E++DD+
Sbjct:    1 MSYVRSVLLRVPAAAARPGPAIGQALGPLGVNMAEFCKQFNERTAGYVSSWTLPVRLDAFADRTFEFHVRSPPTSHMIKRAAGLEKGAGRPGAQSAVGSIRVEAVYEIAKIKVQDTHLADMPIRSVAKSIVGTALSMGVEVIDDK 145          
BLAST of mRNA_C-linearis_contig73.14964.1 vs. uniprot
Match: A0A7S2RUG3_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RUG3_9STRA)

HSP 1 Score: 156 bits (395), Expect = 2.760e-46
Identity = 70/135 (51.85%), Postives = 102/135 (75.56%), Query Frame = 0
Query:    6 TVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQNTPMPCELTAYTDRSFTFQLSTPQTTWMLKRCAGIEKGGARAGHEYSGKVGLKALYEIAKVKNAETHSVLLPLESVCKSVRATALSMGLEI 140
            T R+ VPAG AKP PAIGQALGPLG+NMM+FCK FN +T++   N P+P +LTAY DR+F F + TP T+W++K+ +GIEKG +  G E  G + +KA+YEIAK+K ++ +   +PL+S+CK+V ++  SMG+++
Sbjct:    8 TCRLLVPAGAAKPSPAIGQALGPLGVNMMDFCKGFNAQTENFQPNIPLPVKLTAYGDRTFKFDVKTPHTSWLIKKASGIEKGSSTPGSEIVGTLSVKAVYEIAKLKQSDPNLASIPLKSLCKTVMSSCKSMGIKV 142          
BLAST of mRNA_C-linearis_contig73.14964.1 vs. uniprot
Match: A0A8K1C9P9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C9P9_PYTOL)

HSP 1 Score: 155 bits (392), Expect = 7.630e-46
Identity = 77/143 (53.85%), Postives = 99/143 (69.23%), Query Frame = 0
Query:    1 MSFVR-TVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQNTPMPCELTAYTDRSFTFQLSTPQTTWMLKRCAGIEKGGARAGHEYSGKVGLKALYEIAKVKNAETHSVLLPLESVCKSVRATALSMGLEIVD 142
            MS V+  VR+RV AG A P PAIGQALGPLG+NMMEFCK FNE T   + N P+P  LTA+ DR+F F++ TP  +W LKR AG+  G A AG +  G V L+ +YEIAKVK  + H   + LES+CKS+  +A SMG+ +V+
Sbjct:    1 MSAVKGIVRLRVLAGKAAPSPAIGQALGPLGVNMMEFCKAFNERTAKHIDNIPIPVTLTAFNDRTFKFEIKTPPASWFLKRAAGVTNGSATAGQQEVGTVHLRQIYEIAKVKQQDEHVDYIDLESICKSLIGSAKSMGIRVVE 143          
BLAST of mRNA_C-linearis_contig73.14964.1 vs. uniprot
Match: A0A3R7K313_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K313_9STRA)

HSP 1 Score: 155 bits (392), Expect = 8.640e-46
Identity = 75/135 (55.56%), Postives = 94/135 (69.63%), Query Frame = 0
Query:    7 VRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQNTPMPCELTAYTDRSFTFQLSTPQTTWMLKRCAGIEKGGARAGHEYSGKVGLKALYEIAKVKNAETHSVLLPLESVCKSVRATALSMGLEIV 141
            VR+RV AG A P PAIGQALGPLG+NMMEFCK FNE T  +V+N P+P  LTAYTDR+F F   TP T+W LK+ AGI  G A  G    G V L+ +YEIAKVK  +     + L+S+CK++  +A SMGL++V
Sbjct:   12 VRLRVLAGKASPSPAIGQALGPLGVNMMEFCKAFNERTSKIVENVPVPVVLTAYTDRTFNFATKTPPTSWFLKKAAGISSGSATPGQAVVGSVSLRQIYEIAKVKQQDEMVDYIDLQSICKTLIGSAKSMGLDVV 146          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig73.14964.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX78_ECTSI4.740e-10095.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z8X1_9STRA1.490e-5659.73Ribosomal protein L11 n=1 Tax=Tribonema minus TaxI... [more]
A0A7S2CHZ2_9STRA1.540e-5459.03Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2STT6_9STRA6.860e-5357.86Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9UAQ2_9STRA1.010e-5155.33Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6V2RJT6_HETAK7.130e-5157.75Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1BAR1_9STRA7.320e-4853.10Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2RUG3_9STRA2.760e-4651.85Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A8K1C9P9_PYTOL7.630e-4653.85Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3R7K313_9STRA8.640e-4655.56Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000911Ribosomal protein L11/L12SMARTSM00649rl11ccoord: 7..141
e-value: 2.6E-53
score: 193.1
IPR000911Ribosomal protein L11/L12PANTHERPTHR1166160S RIBOSOMAL PROTEIN L12coord: 5..142
IPR000911Ribosomal protein L11/L12HAMAPMF_00736Ribosomal_L11coord: 3..142
score: 23.05
IPR020783Ribosomal protein L11, C-terminalPFAMPF00298Ribosomal_L11coord: 71..140
e-value: 9.1E-20
score: 70.9
IPR006519Ribosomal protein L11, bacterial-typeTIGRFAMTIGR01632TIGR01632coord: 4..142
e-value: 1.1E-43
score: 146.5
IPR036796Ribosomal protein L11/L12, N-terminal domain superfamilyGENE3D3.30.1550.10coord: 2..67
e-value: 2.5E-28
score: 99.6
IPR036796Ribosomal protein L11/L12, N-terminal domain superfamilySUPERFAMILY54747Ribosomal L11/L12e N-terminal domaincoord: 4..70
IPR020784Ribosomal protein L11, N-terminalPFAMPF03946Ribosomal_L11_Ncoord: 4..65
e-value: 1.7E-26
score: 91.8
IPR036769Ribosomal protein L11, C-terminal domain superfamilyGENE3D1.10.10.250coord: 68..141
e-value: 3.7E-24
score: 86.6
IPR036769Ribosomal protein L11, C-terminal domain superfamilySUPERFAMILY46906Ribosomal protein L11, C-terminal domaincoord: 66..140
NoneNo IPR availablePANTHERPTHR11661:SF139S RIBOSOMAL PROTEIN L11, MITOCHONDRIALcoord: 5..142
NoneNo IPR availablePRODOMPD001367coord: 34..72
e-value: 1.0E-7
score: 130.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig73contigC-linearis_contig73:593545..595714 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig73.14964.1mRNA_C-linearis_contig73.14964.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig73 593417..596826 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig73.14964.1 ID=prot_C-linearis_contig73.14964.1|Name=mRNA_C-linearis_contig73.14964.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=155bp
MSFVRTVRMRVPAGTAKPGPAIGQALGPLGINMMEFCKKFNEETKHVVQN
TPMPCELTAYTDRSFTFQLSTPQTTWMLKRCAGIEKGGARAGHEYSGKVG
LKALYEIAKVKNAETHSVLLPLESVCKSVRATALSMGLEIVDDRESLKRK
DQDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000911Ribosomal_L11/L12
IPR020783Ribosomal_L11_C
IPR006519Ribosomal_L11_bac-typ
IPR036796Ribosomal_L11/L12_N_sf
IPR020784Ribosomal_L11_N
IPR036769Ribosomal_L11_C_sf