prot_C-linearis_contig73.14956.1 (polypeptide) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig73.14956.1 vs. uniprot
Match: A0A6H5JKY9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKY9_9PHAE) HSP 1 Score: 70.1 bits (170), Expect = 1.180e-9 Identity = 99/340 (29.12%), Postives = 134/340 (39.41%), Query Frame = 0
Query: 3 LTDVSAVDGIGFNLISLHALSLSMTITIDADGVHLPTPRLTFPRNNTGSSLYATRVP--FLEIENALNAVRVPPGFPSGFPPP--SNLPGDGPPDPSLPPCFGGGGGSEGAPAYGVPPTGHAGVVPASVGFQPINDADVVLLDAPRDEPLCG-----------------APMESFPPALAGVV-------PPIXXXXXXXXXXVTLTDGSFCQGPRTLDGLSLALNVVGVLLDEKDM-------DGLHLGEQLDAPW---VNDDEAE----FWAQTFDQLDGSEAGYDCVLSAFVSAAIAPKRRPFMVGPQTRKFEINYYHRCSGHLCEFLLRETAKQQG 300
LTDV V GI FNL SLH I +D GVHL RL+F ++ G SL ATR+P + + + + V PP PP + L PP PS G G G P+ P TGHAGVVP++ + F PALA + P + + + Q L +S+ L+V G++ + + D L + E + P V DE + F A+ Q D L+ F AP F VG T +IN +H +GH+ EFL+RETAKQQG
Sbjct: 50 LTDVYVVPGISFNLFSLHQTQKKHRIMLDERGVHLFGGRLSFAYSDIGCSLSATRLPPSYRDGDVIPSTVVPPPVVRQASPPGVGTGLFAQNPPPPSQ---ISGSGAGYG-PSSSFPSTGHAGVVPSTXXXXXXXXXXXXXXXXXXXSTTSXXXXXXXXXXXXXXXXXXTSIRDFQPALAAAIASSDVLSPSVVNPNVSREIEIMPLES---QDNLPLMDMSMFLDV-GLMNGQDSVPPGDFCPDPLGVCESVKPPVAFAVMQDELDVLRDFVAECRVQQDVGPPSLSHALAIF-----APGGPAFTVGKPTSTIDINLFHASTGHVNEFLMRETAKQQG 376
BLAST of mRNA_C-linearis_contig73.14956.1 vs. uniprot
Match: A0A6H5JU31_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU31_9PHAE) HSP 1 Score: 64.7 bits (156), Expect = 6.960e-8 Identity = 100/348 (28.74%), Postives = 135/348 (38.79%), Query Frame = 0
Query: 3 LTDVSAVDGIGFNLISLHALSLSMTITIDADGVHLPTPRLTFPRNNTGSSLYATRVPFLEIENAL-NAVRVPPGFPSGFPPPSNLPGDGPPDPSLPPCFGGGGGSEGAPAYGVPPTGHAG------------------------------VVPASVGFQPINDADVVLLDAPRDEPLCGAPMESFPPALAGVVPPIXXXXXXXXXXVTLTDGS-------FCQGPRTLDGLSLALNVVGVLLDEKDM--------DGLHLGEQLDAPW----VNDDEAEFWAQTFDQLDGSEAGYDCVLSAFVSAAIAPKRRPFMVGPQTRKFEINYYHRCSGHLCEFLLRETAKQQG 300
++DV V GI FNL SLH I +D GVHL RL+F ++ G SL+ATR+P A+ ++ PP + PPS G PSL C V+P + P D D P +P+ A +ES + +V P V LTD F Q + +S+ L+V L+D KD D L L E D P V D+ E + + + +A LS + A IAP PF VG T +IN +H +GH+ EFL+RETAKQQG
Sbjct: 49 MSDVYVVPGITFNLFSLHHTQRKQRIVLDETGVHLFDGRLSFAYSDVGCSLWATRLPQDYCGRAVTSSPDAPPRVSAQASPPSIGTGFVAATPSL--CQSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLP--ICAFPSVDVDPTPTTIPDFQPVITAAVES-----SSIVSP---------PAVELTDFREIEINPLFSQDALPIMDMSMFLDVG--LMDGKDTVPPGDFFPDALELAESSDPPHLAFTVQHDDLEVLSGFLSECNEQQAAAPPSLSHAL-AIIAPGASPFSVGKSTPTIDINLFHASTGHVNEFLMRETAKQQG 375
BLAST of mRNA_C-linearis_contig73.14956.1 vs. uniprot
Match: A0A6H5KCR3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCR3_9PHAE) HSP 1 Score: 63.5 bits (153), Expect = 1.680e-7 Identity = 96/342 (28.07%), Postives = 134/342 (39.18%), Query Frame = 0
Query: 3 LTDVSAVDGIGFNLISLHALSLSMTITIDADGVHLPTPRLTFPRNNTGSSLYATRVP-FLEIENALNAVRVPPGFPSGFPPPSNLPG---DGPPDPSLPPCFGGGGGSEGAPAYGVPPTGHAGVVPASVGFQPINDADVVLLDAPRDEP-----------------LCGAPMESFPPALAGVV-------PPIXXXXXXXXXXVTLTDGSFCQGPRTLDGLSLALNVVGVLLDEKDM-------DGLHLGEQLDAPWVNDDEAEFWAQTFDQLDGSEAGY-DCVLSAFVS--------AAIAPKRRPFMVGPQTRKFEINYYHRCSGHLCEFLLRETAKQQG 300
LTDV V GI FNL SLH + I +D GVHL RL+F ++ G L ATR+P + + + VPP PP + G PP PS G G G P+ P TG AGVVP++ + + F PALA + P + + + Q L +S+ L+V G++ + + D L + E + P +A D+LD + +C + V A IAP F VG T +IN +H +GH+ EFL+RETAKQQG
Sbjct: 50 LTDVYVVPGISFNLYSLHQTQKTHRIMLDERGVHLFGGRLSFAYSDIGCYLSATRLPPSYRDGDVIPSTVVPPPVVRQASPPGVVTGLFAQKPPPPSQ--ILGSGAGY--GPSSSFPFTGPAGVVPSTXXXXXXXXXXXXXXXXXXXSTTSXXXXXXXXXXXXXXDVVPTSIRDFQPALAAAIASSDVLSPSVVNPNVSREIEIMPLES---QDNLPLMDMSMFLDV-GLMNGQDSVPPGDFYPDPLGVCESVKPPVA-------FAVMQDELDALKNFVAECRVKQDVGPPSLSHALAIIAPGGPAFTVGKPTSTIDINLFHASTGHVNEFLMRETAKQQG 376
BLAST of mRNA_C-linearis_contig73.14956.1 vs. uniprot
Match: A0A6H5KKW9_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKW9_9PHAE) HSP 1 Score: 57.0 bits (136), Expect = 7.230e-6 Identity = 37/93 (39.78%), Postives = 48/93 (51.61%), Query Frame = 0
Query: 212 DGLHLGEQLDAPW----VNDDEAEFWAQTFDQLDGSEAGYDCVLSAFVSAAIAPKRRPFMVGPQTRKFEINYYHRCSGHLCEFLLRETAKQQG 300
D L L E D P V D+ E + + + +A LS + A IAP PF VG T +IN +H +GH+ EFL+RETAKQQG
Sbjct: 26 DALELAESADPPHLAFTVQHDDLEVLSGFLSECNEQQAAAPPSLSHAL-ATIAPGASPFSVGKSTPTIDINLFHASTGHVNEFLMRETAKQQG 117
BLAST of mRNA_C-linearis_contig73.14956.1 vs. uniprot
Match: A0A6H5K3I1_9PHAE (Integrase catalytic domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3I1_9PHAE) HSP 1 Score: 57.8 bits (138), Expect = 1.330e-5 Identity = 46/128 (35.94%), Postives = 62/128 (48.44%), Query Frame = 0
Query: 185 FCQGPRTLDGLSLALNVVGVLLDEKDM--------DGLHLGEQLDAPW----VNDDEAEFWAQTFDQLDGSEAGYDCVLSAFVSAAIAPKRRPFMVGPQTRKFEINYYHRCSGHLCEFLLRETAKQQG 300
F Q + +S+ L+V L+D KD D L L E D P V D+ E + + + +A LS + A IAP PF VG T +IN +H +GH+ EFL+RETAKQQG
Sbjct: 922 FSQDALPIMDMSMFLDVG--LMDGKDTVPPGDFFPDALELAESADPPHLAFTVQHDDLEVLSGFLSECNEQQAAAPPSLSHAL-AIIAPGASPFSVGKSTPTIDINLFHASTGHVNEFLMRETAKQQG 1046 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig73.14956.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig73.14956.1 ID=prot_C-linearis_contig73.14956.1|Name=mRNA_C-linearis_contig73.14956.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=300bpback to top |