prot_C-linearis_contig73.14938.1 (polypeptide) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig73.14938.1 vs. uniprot
Match: D7FX15_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX15_ECTSI) HSP 1 Score: 427 bits (1098), Expect = 2.420e-138 Identity = 284/510 (55.69%), Postives = 312/510 (61.18%), Query Frame = 0
Query: 11 GGFIRGADRRTLQNVRVIRRTLVYAIGLSPNFSQVNTLKLPEYFGQYGEITKLVINHHHGVAPDDPRHGSASAYITFGRSEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQDDRFTKDEVQVGLARHGSSFAFKEEVLGTREDGDDKNGGVARPHPTNPVFPPPCAIHMPPASYRRDGTR--HKEGG--------PHHANGAC---------GHAPPPG--------PPPHAYPSCAIHGGGNRGA--PAGACARWMAG--PTGPGSPLPLGGG-------DDRPRLRRRRGXXXXXXXXXXXXXXXXXXNMS---------------GGVPSEYEERLRGGPGGAQEQH--------------GGCGGVFRLPD--LDHGYDMGGSGLAN---------GNLYRPVPKPAPGFGGSDRSTGSGSSWGKGCGSPSVTAETLSSTPPLELSQMEGFSPTSTSNSFFGGGSVGNGTAPPP-REVWNQGQY 441
G FIRGADRR LQN+RV+RR LVYAIGLSPNF+QVNTLK PEYFGQYGEI KLVINHH GV DDPR+GSASAYITF R EDAWAA+CSVDGFR+MGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGD++DRFTKDEVQ+GLARHGSSFAFKEEVLG R G A P PTNPVFPPPCA M PA YRR+G ++GG H C G+ PPP P P C GGG G P ARW P PGSPLPL GG D+RPR R XXXXXXXXXXXXXXX N GVP+EY E++ P G Q H G VFRLPD D ++ GG GN Y P P+PA GFGG S GS + WGKG SP T ETLS+TPPLELS ++G SPTS S SF G G G G + P +E+WN+ QY
Sbjct: 58 GVFIRGADRRALQNLRVVRRNLVYAIGLSPNFAQVNTLKQPEYFGQYGEIAKLVINHHEGVPQDDPRYGSASAYITFRRQEDAWAAVCSVDGFRLMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDEEDRFTKDEVQLGLARHGSSFAFKEEVLGDR-------GNTAAPRPTNPVFPPPCA--MLPAPYRREGAGKPQRDGGNMGVGGRQQHQXXXDCEIYRHGNTGGNGPPPPKALPMSLPPSPQVCHPCRTRGGGCCGGAFPGAEAARWAGSGAPLTPGSPLPLDGGGLSLSGSDERPRRRXXXXXXXXXXXXXXXXXXXGHGNDGCGGPTAPAQQQYGHHAGVPNEYGEQMT--PAGQQASHFELTAAAAARAGLGSPTGDVFRLPDHVFDRPFEFGGXXXXXXXXXXXXXXGNPYYPAPQPAQGFGGG--SYGSSAGWGKGRNSPLATPETLSNTPPLELSPLDGSSPTSASASFQGFGCAGGGASDPSAQELWNRTQY 554
BLAST of mRNA_C-linearis_contig73.14938.1 vs. uniprot
Match: A0A6H5JE06_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE06_9PHAE) HSP 1 Score: 416 bits (1070), Expect = 3.240e-132 Identity = 347/746 (46.51%), Postives = 386/746 (51.74%), Query Frame = 0
Query: 11 GGFIRGADRRTLQNVRVIRRTLVYAIGLSPNFSQVNTLKLPEYFGQYGEITKLVINHHHGVAPDDPRHGSASAYITFGRSEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQDDRFTK---DEVQVGLARHGSSFAFKEEVLGTREDGDDKNGGVARPHPTNPVFPPPCAIHMPPASYRRDG---------------TRHKEGGPHHANGACGHAPPPG--------PPPHAYPSCAIHGGGNR----------GA-PAGACARWMAG--PTGPGSPLPLGGG-------DDRPRLRRRRGXXXXXXXXXXXXXXXXXXN--MSGGVPSEYEERLR---GGPGGAQEQHGG---CGG-----------------------VFRLPD--LDHGYDMGGSG----------LANGNLYRPVPKPAPGFGGSDRSTGSGSSWGKGCGSPSVTAETLSSTPPLELSQMEGFSPTSTSNSFFGGGSVGNGTAPPP--REVWNQGQYHRHPRPSPTSFSGVVEAETQRGFVEQHKRLQQXXXXXXXXXXXXXXXXXXXXXXXQASFGGQQLHQLQRYFE---KNEGXGAGRTPAALPP---PPGSGFTDSSVAPAPA--LGGASSFSD-DLSFAEERLAALSWGD------GPTGDGDAHLCS--------QQSGGGGGAEVADLISRRGVRDERERDSHSSSSLWTAESSPIVGFGSLAQASAASQAEVS 642
G FIRGADRR LQN+RV+RRTLVYAIGLSPNF+QVNTLK PEYFGQYGEI KLVINHH GV DDPR+GSASAYITF R EDAWAA+CSVDGFR+MGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGD++DRFTK DEVQ+GLARHGSSFAFKEEVLG R G A PTNPVFPPPC MPPA YRR G +EG N A G+APPP P PH C G GA P ARW G P PGSPLPL GG D+RPR R XXXXXX + GG G P G ++GG G VFRLPD D ++ GG G +GN Y P P+PA F G + GS + WGKG GS T ET S+T PL LS ++G SPTS S SF G G AP P +E+WN QY RP+P F AE + XXXXXXXXXXXXXXXX + QQ+ QL+R E K+ G G P PG D S P P G S S +LSF E++LAALSW D G TG G + QQ G G + R D + W SP+ GFGSLA SAASQAE S
Sbjct: 57 GVFIRGADRRALQNLRVVRRTLVYAIGLSPNFAQVNTLKQPEYFGQYGEIAKLVINHHEGVPQDDPRYGSASAYITFRRQEDAWAAVCSVDGFRLMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDEEDRFTKAGSDEVQLGLARHGSSFAFKEEVLGDR-------GDTAARRPTNPVFPPPCP--MPPAPYRRAGGGKPQRDGGNMGGRYQHRREGELCRHNTAGGNAPPPPKAQPTLLPPSPHDCHPCRTRGXXXXXXXDCVDCFGGAFPGAEAARWAGGGAPLTPGSPLPLDGGSLSLSGSDERPRRRXXXXXXXXXXGATGTPGLVCHGHDACGGGXXXXXXXXXXXXYGHPAGVSNEYGGQRTAAGQQASHFELTAAAARAVPGSPPQDVFRLPDHAFDCSFEFGGGGRGGGRADDLATVDGNPYYPTPQPAQDFDGG--AYGSSAGWGKGRGSSLATPETQSNTSPLNLSPLDGSSPTSASASFQGFGXXXX-XAPDPSAQELWNPTQYRHPARPAPPFFGMRDAAEAPQQLQRDAXXXXXXXXXXXXXXXXXXXXXRQRYELESIAALKQQIKQLRRAAEEGNKSGGVALGHFGGGDPTRSRAPGVNVPDMSGPPPPPRDCGNRGSHSAAELSFVEDQLAALSWNDREDIAGGATGGGTNNTAGTLVSSGARQQGSYGAGESIQGFEERSWDEDV--------GTAWPGVPSPLAGFGSLALPSAASQAEAS 782
BLAST of mRNA_C-linearis_contig73.14938.1 vs. uniprot
Match: A0A836CMF8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMF8_9STRA) HSP 1 Score: 188 bits (477), Expect = 2.740e-53 Identity = 87/128 (67.97%), Postives = 100/128 (78.12%), Query Frame = 0
Query: 25 VRVIRRTLVYAIGLSPNFSQVNTLKLPEYFGQYGEITKLVINHHHGVAPDDPRHGSASAYITFGRSEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQDDRFTKDEV 152
+RVI+R LVY IGL P + P YFGQYG I K+V+NHHHGV DDPRHGSASAY+TF EDAW+AI +VDGF + GR +RASFGTTKYCNSFLR L CNN DCLYLHELGD+ DRFTK+E+
Sbjct: 1 LRVIQRNLVYVIGLGPGITAGEAAS-PPYFGQYGRIAKIVVNHHHGVNADDPRHGSASAYVTFAHKEDAWSAIKAVDGFWLEGRHVRASFGTTKYCNSFLRGLACNNGDCLYLHELGDERDRFTKEEI 127
BLAST of mRNA_C-linearis_contig73.14938.1 vs. uniprot
Match: A0A7S4D5P1_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5P1_HETAK) HSP 1 Score: 200 bits (508), Expect = 9.550e-53 Identity = 99/179 (55.31%), Postives = 126/179 (70.39%), Query Frame = 0
Query: 18 DRRTLQNVRVIRRTLVYAIGLSPNFSQVNTLKLPEYFGQYGEITKLVINHHHGVAPDDPRHGSASAYITFGRSEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQDDRFTKDEVQVGLARHGSSFAFKEEVLGTREDGDDKNGGVARPHPTNPVFPPP 196
D+R+L NVRVI+R LVY IGL + + L+ E+FGQYG I K+V+NH+HG P DPRHGSASAYITF +DA +AI +VDG++ GR IRASFGTTKYCN+FLRNLPC NP+CLYLHELGD +DR+T++E+Q G ++ + + V+G E G G N VFPPP
Sbjct: 107 DKRSLHNVRVIQRNLVYVIGLPLSIASEEDLRRGEFFGQYGRIHKVVVNHNHGAPPKDPRHGSASAYITFCHKDDARSAIQAVDGYQWDGRLIRASFGTTKYCNNFLRNLPCTNPECLYLHELGDSEDRYTREEIQTGASKTDAGPFGTQTVVG--EGGPSGTGKKV----ANSVFPPP 279
BLAST of mRNA_C-linearis_contig73.14938.1 vs. uniprot
Match: A0A7S2GN38_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN38_9STRA) HSP 1 Score: 191 bits (486), Expect = 5.830e-48 Identity = 100/187 (53.48%), Postives = 125/187 (66.84%), Query Frame = 0
Query: 18 DRRTLQNVRVIRRTLVYAIGLSPNFSQVNTLKLPEYFGQYGEITKLVINHHHGVAPDDPRHGSAS----AYITFGRSEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQDDRFTKDEVQVGLARHGSSFAFKEEVLGT----REDGDDKNGGVARPHPTNPVFPPP 196
DR+ LQN+RV++R LVY IG+SP+ + TL+ EYFGQ+G+I K+V+N +H DPR+ SAS AYITF EDA A I +VDGF + GR +RASFGTTKYCNSFLRNL C NPDCLYLHELG+++D FTK+++Q G S F EV T R G+ G R TNP+ PPP
Sbjct: 147 DRKNLQNIRVVQRNLVYVIGISPSIASEETLRRGEYFGQFGKIVKVVVNRNHSGGSGDPRNASASLSASAYITFAHKEDAKACIQAVDGFWMDGRNVRASFGTTKYCNSFLRNLSCTNPDCLYLHELGEEEDSFTKEQIQSG---QNSQFKNSTEVGTTDVVVRVTGNGGPSGTGR-RVTNPIMPPP 329
BLAST of mRNA_C-linearis_contig73.14938.1 vs. uniprot
Match: B8BXU6_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXU6_THAPS) HSP 1 Score: 166 bits (421), Expect = 4.450e-44 Identity = 77/134 (57.46%), Postives = 99/134 (73.88%), Query Frame = 0
Query: 18 DRRTLQNVRVIRRTLVYAIGLSPNFSQVNTLKLPEYFGQYGEITKLVINHHHGVAPDDPRHGSASAYITFGRSEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQDDRFTKDE 151
DR TL +RVIRR LVYA+G+ P+ + L+ PEYFGQYG+I K+VIN +H P DPR SASAY+TF ED A I ++DGF GR IRAS+GT+KYC++F++++ CNNPDC YLH +GDQ+D FTK E
Sbjct: 83 DRSTLATMRVIRRNLVYAVGMPPSIATEELLRKPEYFGQYGKIAKIVINRNHN--PGDPRRASASAYVTFVHKEDTLACILALDGFYHDGRNIRASYGTSKYCSAFIKSVKCNNPDCTYLHHMGDQEDTFTKQE 214
BLAST of mRNA_C-linearis_contig73.14938.1 vs. uniprot
Match: H3G5S5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5S5_PHYRM) HSP 1 Score: 166 bits (421), Expect = 7.160e-44 Identity = 81/141 (57.45%), Postives = 102/141 (72.34%), Query Frame = 0
Query: 18 DRRTLQNVRVIRRTLVYAIGLSPNFSQVNTLKLPEYFGQYGEITKLVINHHHGVAPDDPRHGSASAYITFGRSEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQDDRFTKDEVQVGLAR 158
+R++LQNVRV++R LVY IGL F++ + L+ E FGQYG+I K V+N H A D + +ASAYITF EDA I ++DG+ + G +RASFGTTKYCN FLRN+ CNNPDCLYLHELGD DD FTK+E+Q G R
Sbjct: 92 NRKSLQNVRVMQRNLVYVIGLPVRFAEEDILRSNECFGQYGKIVKAVVNKSHLSA--DRANATASAYITFANKEDALCCIVAIDGYYLDGSMLRASFGTTKYCNFFLRNMQCNNPDCLYLHELGDDDDSFTKEEMQSGTRR 230
BLAST of mRNA_C-linearis_contig73.14938.1 vs. uniprot
Match: A0A482RNX1_9ARCH (RRM domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RNX1_9ARCH) HSP 1 Score: 163 bits (413), Expect = 3.310e-43 Identity = 73/141 (51.77%), Postives = 106/141 (75.18%), Query Frame = 0
Query: 18 DRRTLQNVRVIRRTLVYAIGLSPNFSQVNTLKLPEYFGQYGEITKLVINHHHGVAPDDPRHGSASAYITFGRSEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQDDRFTKDEVQVGLAR 158
DR+ L N RV++R LVY GL + +TL+ PEYFGQYG+++K+++ H AP H + SAY+TF EDA A I +++GF + G +RASFGTTKYCN+++R+LPC+NPDC+YLHELG+++DRFTK+E+Q+G ++
Sbjct: 37 DRKHLHNYRVVQRNLVYVTGLPASCGAEDTLRRPEYFGQYGKVSKVIV--HRNAAPP---HHTVSAYVTFCHKEDARACIQALEGFVVEGHVLRASFGTTKYCNNYIRHLPCSNPDCVYLHELGEEEDRFTKEEIQLGSSK 172
BLAST of mRNA_C-linearis_contig73.14938.1 vs. uniprot
Match: K0T133_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T133_THAOC) HSP 1 Score: 176 bits (446), Expect = 6.530e-43 Identity = 79/153 (51.63%), Postives = 109/153 (71.24%), Query Frame = 0
Query: 18 DRRTLQNVRVIRRTLVYAIGLSPNFSQVNTLKLPEYFGQYGEITKLVINHHHGVAPDDPRHGSASAYITFGRSEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQDDRFTKDEVQVGLARHGSSFAFKEEVL 170
DR TL ++RVIRR LVYA+GL PN + L+ PEYFGQYG+I K+V+N +H P DPR SASAY+TF EDA A I ++DGF GR +RAS+GT+KYC++F++++ CNNPDC YLH +G+++D FTK E+Q G G +++ +
Sbjct: 195 DRSTLASMRVIRRNLVYAVGLPPNVATEENLRRPEYFGQYGKIAKVVVNRNHN--PGDPRRSSASAYVTFSHKEDALACILALDGFYHDGRNVRASYGTSKYCSAFIKSVRCNNPDCTYLHHMGEKEDTFTKQEIQAGYVTSGRDVLARQKQI 345
BLAST of mRNA_C-linearis_contig73.14938.1 vs. uniprot
Match: A0A3M6VTA5_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VTA5_9STRA) HSP 1 Score: 171 bits (433), Expect = 3.000e-41 Identity = 93/193 (48.19%), Postives = 122/193 (63.21%), Query Frame = 0
Query: 19 RRTLQNVRVIRRTLVYAIGLSPNFSQVNTLKLPEYFGQYGEITKLVINHHHGVAPDDPRHGSASAYITFGRSEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQDDRFTKDEVQVGLARHGSSFAFKEEVLGTREDGDDKNGGVARPHPTNPVFPPPCAIHMPPASYRRDGT 211
R++LQNVRV++R LVY IGL F+ + L+ E FGQYG+I K V+N H A D + +ASAYITF EDA I ++DG+ + G +RASFGTTKYCN FLRN+ CNNPDCLYLH+LG+++D FTK+E+Q L H AF++ + E +D+ G FPPP H P A+ R GT
Sbjct: 100 RKSLQNVRVMQRNLVYVIGLPVQFAHEDILRSNECFGQYGKIIKAVVNKSHLSA--DRSNATASAYITFANKEDALCCILAIDGYYLDGSVLRASFGTTKYCNFFLRNMQCNNPDCLYLHKLGEEEDSFTKEEMQAAL--HSGKAAFRDTAMANGE-AEDRAGSQ---------FPPP---HRPSAASSRTGT 275 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig73.14938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_C-linearis_contig73.14938.1 ID=prot_C-linearis_contig73.14938.1|Name=mRNA_C-linearis_contig73.14938.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=648bpback to top |