prot_C-linearis_contig73.14938.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig73.14938.1
Unique Nameprot_C-linearis_contig73.14938.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length648
Homology
BLAST of mRNA_C-linearis_contig73.14938.1 vs. uniprot
Match: D7FX15_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX15_ECTSI)

HSP 1 Score: 427 bits (1098), Expect = 2.420e-138
Identity = 284/510 (55.69%), Postives = 312/510 (61.18%), Query Frame = 0
Query:   11 GGFIRGADRRTLQNVRVIRRTLVYAIGLSPNFSQVNTLKLPEYFGQYGEITKLVINHHHGVAPDDPRHGSASAYITFGRSEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQDDRFTKDEVQVGLARHGSSFAFKEEVLGTREDGDDKNGGVARPHPTNPVFPPPCAIHMPPASYRRDGTR--HKEGG--------PHHANGAC---------GHAPPPG--------PPPHAYPSCAIHGGGNRGA--PAGACARWMAG--PTGPGSPLPLGGG-------DDRPRLRRRRGXXXXXXXXXXXXXXXXXXNMS---------------GGVPSEYEERLRGGPGGAQEQH--------------GGCGGVFRLPD--LDHGYDMGGSGLAN---------GNLYRPVPKPAPGFGGSDRSTGSGSSWGKGCGSPSVTAETLSSTPPLELSQMEGFSPTSTSNSFFGGGSVGNGTAPPP-REVWNQGQY 441
            G FIRGADRR LQN+RV+RR LVYAIGLSPNF+QVNTLK PEYFGQYGEI KLVINHH GV  DDPR+GSASAYITF R EDAWAA+CSVDGFR+MGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGD++DRFTKDEVQ+GLARHGSSFAFKEEVLG R       G  A P PTNPVFPPPCA  M PA YRR+G     ++GG         H     C         G+ PPP         P P     C   GGG  G   P    ARW     P  PGSPLPL GG       D+RPR R    XXXXXXXXXXXXXXX   N                  GVP+EY E++   P G Q  H                 G VFRLPD   D  ++ GG              GN Y P P+PA GFGG   S GS + WGKG  SP  T ETLS+TPPLELS ++G SPTS S SF G G  G G + P  +E+WN+ QY
Sbjct:   58 GVFIRGADRRALQNLRVVRRNLVYAIGLSPNFAQVNTLKQPEYFGQYGEIAKLVINHHEGVPQDDPRYGSASAYITFRRQEDAWAAVCSVDGFRLMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDEEDRFTKDEVQLGLARHGSSFAFKEEVLGDR-------GNTAAPRPTNPVFPPPCA--MLPAPYRREGAGKPQRDGGNMGVGGRQQHQXXXDCEIYRHGNTGGNGPPPPKALPMSLPPSPQVCHPCRTRGGGCCGGAFPGAEAARWAGSGAPLTPGSPLPLDGGGLSLSGSDERPRRRXXXXXXXXXXXXXXXXXXXGHGNDGCGGPTAPAQQQYGHHAGVPNEYGEQMT--PAGQQASHFELTAAAAARAGLGSPTGDVFRLPDHVFDRPFEFGGXXXXXXXXXXXXXXGNPYYPAPQPAQGFGGG--SYGSSAGWGKGRNSPLATPETLSNTPPLELSPLDGSSPTSASASFQGFGCAGGGASDPSAQELWNRTQY 554          
BLAST of mRNA_C-linearis_contig73.14938.1 vs. uniprot
Match: A0A6H5JE06_9PHAE (RRM domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE06_9PHAE)

HSP 1 Score: 416 bits (1070), Expect = 3.240e-132
Identity = 347/746 (46.51%), Postives = 386/746 (51.74%), Query Frame = 0
Query:   11 GGFIRGADRRTLQNVRVIRRTLVYAIGLSPNFSQVNTLKLPEYFGQYGEITKLVINHHHGVAPDDPRHGSASAYITFGRSEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQDDRFTK---DEVQVGLARHGSSFAFKEEVLGTREDGDDKNGGVARPHPTNPVFPPPCAIHMPPASYRRDG---------------TRHKEGGPHHANGACGHAPPPG--------PPPHAYPSCAIHGGGNR----------GA-PAGACARWMAG--PTGPGSPLPLGGG-------DDRPRLRRRRGXXXXXXXXXXXXXXXXXXN--MSGGVPSEYEERLR---GGPGGAQEQHGG---CGG-----------------------VFRLPD--LDHGYDMGGSG----------LANGNLYRPVPKPAPGFGGSDRSTGSGSSWGKGCGSPSVTAETLSSTPPLELSQMEGFSPTSTSNSFFGGGSVGNGTAPPP--REVWNQGQYHRHPRPSPTSFSGVVEAETQRGFVEQHKRLQQXXXXXXXXXXXXXXXXXXXXXXXQASFGGQQLHQLQRYFE---KNEGXGAGRTPAALPP---PPGSGFTDSSVAPAPA--LGGASSFSD-DLSFAEERLAALSWGD------GPTGDGDAHLCS--------QQSGGGGGAEVADLISRRGVRDERERDSHSSSSLWTAESSPIVGFGSLAQASAASQAEVS 642
            G FIRGADRR LQN+RV+RRTLVYAIGLSPNF+QVNTLK PEYFGQYGEI KLVINHH GV  DDPR+GSASAYITF R EDAWAA+CSVDGFR+MGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGD++DRFTK   DEVQ+GLARHGSSFAFKEEVLG R       G  A   PTNPVFPPPC   MPPA YRR G                  +EG     N A G+APPP         P PH    C   G              GA P    ARW  G  P  PGSPLPL GG       D+RPR R    XXXXXX            +    GG             G P G   ++GG     G                       VFRLPD   D  ++ GG G            +GN Y P P+PA  F G   + GS + WGKG GS   T ET S+T PL LS ++G SPTS S SF G G      AP P  +E+WN  QY    RP+P  F     AE  +           XXXXXXXXXXXXXXXX         +   QQ+ QL+R  E   K+ G   G      P     PG    D S  P P    G   S S  +LSF E++LAALSW D      G TG G  +           QQ   G G  +     R    D          + W    SP+ GFGSLA  SAASQAE S
Sbjct:   57 GVFIRGADRRALQNLRVVRRTLVYAIGLSPNFAQVNTLKQPEYFGQYGEIAKLVINHHEGVPQDDPRYGSASAYITFRRQEDAWAAVCSVDGFRLMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDEEDRFTKAGSDEVQLGLARHGSSFAFKEEVLGDR-------GDTAARRPTNPVFPPPCP--MPPAPYRRAGGGKPQRDGGNMGGRYQHRREGELCRHNTAGGNAPPPPKAQPTLLPPSPHDCHPCRTRGXXXXXXXDCVDCFGGAFPGAEAARWAGGGAPLTPGSPLPLDGGSLSLSGSDERPRRRXXXXXXXXXXGATGTPGLVCHGHDACGGGXXXXXXXXXXXXYGHPAGVSNEYGGQRTAAGQQASHFELTAAAARAVPGSPPQDVFRLPDHAFDCSFEFGGGGRGGGRADDLATVDGNPYYPTPQPAQDFDGG--AYGSSAGWGKGRGSSLATPETQSNTSPLNLSPLDGSSPTSASASFQGFGXXXX-XAPDPSAQELWNPTQYRHPARPAPPFFGMRDAAEAPQQLQRDAXXXXXXXXXXXXXXXXXXXXXRQRYELESIAALKQQIKQLRRAAEEGNKSGGVALGHFGGGDPTRSRAPGVNVPDMSGPPPPPRDCGNRGSHSAAELSFVEDQLAALSWNDREDIAGGATGGGTNNTAGTLVSSGARQQGSYGAGESIQGFEERSWDEDV--------GTAWPGVPSPLAGFGSLALPSAASQAEAS 782          
BLAST of mRNA_C-linearis_contig73.14938.1 vs. uniprot
Match: A0A836CMF8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMF8_9STRA)

HSP 1 Score: 188 bits (477), Expect = 2.740e-53
Identity = 87/128 (67.97%), Postives = 100/128 (78.12%), Query Frame = 0
Query:   25 VRVIRRTLVYAIGLSPNFSQVNTLKLPEYFGQYGEITKLVINHHHGVAPDDPRHGSASAYITFGRSEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQDDRFTKDEV 152
            +RVI+R LVY IGL P  +       P YFGQYG I K+V+NHHHGV  DDPRHGSASAY+TF   EDAW+AI +VDGF + GR +RASFGTTKYCNSFLR L CNN DCLYLHELGD+ DRFTK+E+
Sbjct:    1 LRVIQRNLVYVIGLGPGITAGEAAS-PPYFGQYGRIAKIVVNHHHGVNADDPRHGSASAYVTFAHKEDAWSAIKAVDGFWLEGRHVRASFGTTKYCNSFLRGLACNNGDCLYLHELGDERDRFTKEEI 127          
BLAST of mRNA_C-linearis_contig73.14938.1 vs. uniprot
Match: A0A7S4D5P1_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D5P1_HETAK)

HSP 1 Score: 200 bits (508), Expect = 9.550e-53
Identity = 99/179 (55.31%), Postives = 126/179 (70.39%), Query Frame = 0
Query:   18 DRRTLQNVRVIRRTLVYAIGLSPNFSQVNTLKLPEYFGQYGEITKLVINHHHGVAPDDPRHGSASAYITFGRSEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQDDRFTKDEVQVGLARHGSSFAFKEEVLGTREDGDDKNGGVARPHPTNPVFPPP 196
            D+R+L NVRVI+R LVY IGL  + +    L+  E+FGQYG I K+V+NH+HG  P DPRHGSASAYITF   +DA +AI +VDG++  GR IRASFGTTKYCN+FLRNLPC NP+CLYLHELGD +DR+T++E+Q G ++  +     + V+G  E G    G        N VFPPP
Sbjct:  107 DKRSLHNVRVIQRNLVYVIGLPLSIASEEDLRRGEFFGQYGRIHKVVVNHNHGAPPKDPRHGSASAYITFCHKDDARSAIQAVDGYQWDGRLIRASFGTTKYCNNFLRNLPCTNPECLYLHELGDSEDRYTREEIQTGASKTDAGPFGTQTVVG--EGGPSGTGKKV----ANSVFPPP 279          
BLAST of mRNA_C-linearis_contig73.14938.1 vs. uniprot
Match: A0A7S2GN38_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GN38_9STRA)

HSP 1 Score: 191 bits (486), Expect = 5.830e-48
Identity = 100/187 (53.48%), Postives = 125/187 (66.84%), Query Frame = 0
Query:   18 DRRTLQNVRVIRRTLVYAIGLSPNFSQVNTLKLPEYFGQYGEITKLVINHHHGVAPDDPRHGSAS----AYITFGRSEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQDDRFTKDEVQVGLARHGSSFAFKEEVLGT----REDGDDKNGGVARPHPTNPVFPPP 196
            DR+ LQN+RV++R LVY IG+SP+ +   TL+  EYFGQ+G+I K+V+N +H     DPR+ SAS    AYITF   EDA A I +VDGF + GR +RASFGTTKYCNSFLRNL C NPDCLYLHELG+++D FTK+++Q G     S F    EV  T    R  G+    G  R   TNP+ PPP
Sbjct:  147 DRKNLQNIRVVQRNLVYVIGISPSIASEETLRRGEYFGQFGKIVKVVVNRNHSGGSGDPRNASASLSASAYITFAHKEDAKACIQAVDGFWMDGRNVRASFGTTKYCNSFLRNLSCTNPDCLYLHELGEEEDSFTKEQIQSG---QNSQFKNSTEVGTTDVVVRVTGNGGPSGTGR-RVTNPIMPPP 329          
BLAST of mRNA_C-linearis_contig73.14938.1 vs. uniprot
Match: B8BXU6_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXU6_THAPS)

HSP 1 Score: 166 bits (421), Expect = 4.450e-44
Identity = 77/134 (57.46%), Postives = 99/134 (73.88%), Query Frame = 0
Query:   18 DRRTLQNVRVIRRTLVYAIGLSPNFSQVNTLKLPEYFGQYGEITKLVINHHHGVAPDDPRHGSASAYITFGRSEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQDDRFTKDE 151
            DR TL  +RVIRR LVYA+G+ P+ +    L+ PEYFGQYG+I K+VIN +H   P DPR  SASAY+TF   ED  A I ++DGF   GR IRAS+GT+KYC++F++++ CNNPDC YLH +GDQ+D FTK E
Sbjct:   83 DRSTLATMRVIRRNLVYAVGMPPSIATEELLRKPEYFGQYGKIAKIVINRNHN--PGDPRRASASAYVTFVHKEDTLACILALDGFYHDGRNIRASYGTSKYCSAFIKSVKCNNPDCTYLHHMGDQEDTFTKQE 214          
BLAST of mRNA_C-linearis_contig73.14938.1 vs. uniprot
Match: H3G5S5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G5S5_PHYRM)

HSP 1 Score: 166 bits (421), Expect = 7.160e-44
Identity = 81/141 (57.45%), Postives = 102/141 (72.34%), Query Frame = 0
Query:   18 DRRTLQNVRVIRRTLVYAIGLSPNFSQVNTLKLPEYFGQYGEITKLVINHHHGVAPDDPRHGSASAYITFGRSEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQDDRFTKDEVQVGLAR 158
            +R++LQNVRV++R LVY IGL   F++ + L+  E FGQYG+I K V+N  H  A  D  + +ASAYITF   EDA   I ++DG+ + G  +RASFGTTKYCN FLRN+ CNNPDCLYLHELGD DD FTK+E+Q G  R
Sbjct:   92 NRKSLQNVRVMQRNLVYVIGLPVRFAEEDILRSNECFGQYGKIVKAVVNKSHLSA--DRANATASAYITFANKEDALCCIVAIDGYYLDGSMLRASFGTTKYCNFFLRNMQCNNPDCLYLHELGDDDDSFTKEEMQSGTRR 230          
BLAST of mRNA_C-linearis_contig73.14938.1 vs. uniprot
Match: A0A482RNX1_9ARCH (RRM domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RNX1_9ARCH)

HSP 1 Score: 163 bits (413), Expect = 3.310e-43
Identity = 73/141 (51.77%), Postives = 106/141 (75.18%), Query Frame = 0
Query:   18 DRRTLQNVRVIRRTLVYAIGLSPNFSQVNTLKLPEYFGQYGEITKLVINHHHGVAPDDPRHGSASAYITFGRSEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQDDRFTKDEVQVGLAR 158
            DR+ L N RV++R LVY  GL  +    +TL+ PEYFGQYG+++K+++  H   AP    H + SAY+TF   EDA A I +++GF + G  +RASFGTTKYCN+++R+LPC+NPDC+YLHELG+++DRFTK+E+Q+G ++
Sbjct:   37 DRKHLHNYRVVQRNLVYVTGLPASCGAEDTLRRPEYFGQYGKVSKVIV--HRNAAPP---HHTVSAYVTFCHKEDARACIQALEGFVVEGHVLRASFGTTKYCNNYIRHLPCSNPDCVYLHELGEEEDRFTKEEIQLGSSK 172          
BLAST of mRNA_C-linearis_contig73.14938.1 vs. uniprot
Match: K0T133_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T133_THAOC)

HSP 1 Score: 176 bits (446), Expect = 6.530e-43
Identity = 79/153 (51.63%), Postives = 109/153 (71.24%), Query Frame = 0
Query:   18 DRRTLQNVRVIRRTLVYAIGLSPNFSQVNTLKLPEYFGQYGEITKLVINHHHGVAPDDPRHGSASAYITFGRSEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQDDRFTKDEVQVGLARHGSSFAFKEEVL 170
            DR TL ++RVIRR LVYA+GL PN +    L+ PEYFGQYG+I K+V+N +H   P DPR  SASAY+TF   EDA A I ++DGF   GR +RAS+GT+KYC++F++++ CNNPDC YLH +G+++D FTK E+Q G    G     +++ +
Sbjct:  195 DRSTLASMRVIRRNLVYAVGLPPNVATEENLRRPEYFGQYGKIAKVVVNRNHN--PGDPRRSSASAYVTFSHKEDALACILALDGFYHDGRNVRASYGTSKYCSAFIKSVRCNNPDCTYLHHMGEKEDTFTKQEIQAGYVTSGRDVLARQKQI 345          
BLAST of mRNA_C-linearis_contig73.14938.1 vs. uniprot
Match: A0A3M6VTA5_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VTA5_9STRA)

HSP 1 Score: 171 bits (433), Expect = 3.000e-41
Identity = 93/193 (48.19%), Postives = 122/193 (63.21%), Query Frame = 0
Query:   19 RRTLQNVRVIRRTLVYAIGLSPNFSQVNTLKLPEYFGQYGEITKLVINHHHGVAPDDPRHGSASAYITFGRSEDAWAAICSVDGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQDDRFTKDEVQVGLARHGSSFAFKEEVLGTREDGDDKNGGVARPHPTNPVFPPPCAIHMPPASYRRDGT 211
            R++LQNVRV++R LVY IGL   F+  + L+  E FGQYG+I K V+N  H  A  D  + +ASAYITF   EDA   I ++DG+ + G  +RASFGTTKYCN FLRN+ CNNPDCLYLH+LG+++D FTK+E+Q  L  H    AF++  +   E  +D+ G           FPPP   H P A+  R GT
Sbjct:  100 RKSLQNVRVMQRNLVYVIGLPVQFAHEDILRSNECFGQYGKIIKAVVNKSHLSA--DRSNATASAYITFANKEDALCCILAIDGYYLDGSVLRASFGTTKYCNFFLRNMQCNNPDCLYLHKLGEEEDSFTKEEMQAAL--HSGKAAFRDTAMANGE-AEDRAGSQ---------FPPP---HRPSAASSRTGT 275          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig73.14938.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX15_ECTSI2.420e-13855.69RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JE06_9PHAE3.240e-13246.51RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CMF8_9STRA2.740e-5367.97Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S4D5P1_HETAK9.550e-5355.31Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A7S2GN38_9STRA5.830e-4853.48Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
B8BXU6_THAPS4.450e-4457.46Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
H3G5S5_PHYRM7.160e-4457.45Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A482RNX1_9ARCH3.310e-4351.77RRM domain-containing protein (Fragment) n=1 Tax=a... [more]
K0T133_THAOC6.530e-4351.63Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A3M6VTA5_9STRA3.000e-4148.19Uncharacterized protein n=2 Tax=Peronospora effusa... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003954RNA recognition motif domain, eukaryoteSMARTSM00361rrm2_1coord: 32..113
e-value: 2.4E-7
score: 40.4
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 32..114
e-value: 3.6E-19
score: 70.4
NoneNo IPR availablePANTHERPTHR12603:SF0CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 4coord: 9..155
IPR039780CCR4-NOT transcription complex subunit 4PANTHERPTHR12603CCR4-NOT TRANSCRIPTION COMPLEX RELATEDcoord: 9..155
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 31..117
score: 11.571
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 32..293

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig73contigC-linearis_contig73:144469..147235 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig73.14938.1mRNA_C-linearis_contig73.14938.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig73 144469..147235 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig73.14938.1 ID=prot_C-linearis_contig73.14938.1|Name=mRNA_C-linearis_contig73.14938.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=648bp
QQQQQQQQQPGGFIRGADRRTLQNVRVIRRTLVYAIGLSPNFSQVNTLKL
PEYFGQYGEITKLVINHHHGVAPDDPRHGSASAYITFGRSEDAWAAICSV
DGFRIMGRTIRASFGTTKYCNSFLRNLPCNNPDCLYLHELGDQDDRFTKD
EVQVGLARHGSSFAFKEEVLGTREDGDDKNGGVARPHPTNPVFPPPCAIH
MPPASYRRDGTRHKEGGPHHANGACGHAPPPGPPPHAYPSCAIHGGGNRG
APAGACARWMAGPTGPGSPLPLGGGDDRPRLRRRRGQRGRRGSGTGDPSG
DGNGNMSGGVPSEYEERLRGGPGGAQEQHGGCGGVFRLPDLDHGYDMGGS
GLANGNLYRPVPKPAPGFGGSDRSTGSGSSWGKGCGSPSVTAETLSSTPP
LELSQMEGFSPTSTSNSFFGGGSVGNGTAPPPREVWNQGQYHRHPRPSPT
SFSGVVEAETQRGFVEQHKRLQQQHLLEQQQLLHLLQQQRQQQQLFQASF
GGQQLHQLQRYFEKNEGGGAGRTPAALPPPPGSGFTDSSVAPAPALGGAS
SFSDDLSFAEERLAALSWGDGPTGDGDAHLCSQQSGGGGGAEVADLISRR
GVRDERERDSHSSSSLWTAESSPIVGFGSLAQASAASQAEVSTGLHT*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003954RRM_dom_euk
IPR012677Nucleotide-bd_a/b_plait_sf
IPR039780Mot2
IPR000504RRM_dom
IPR035979RBD_domain_sf