prot_C-linearis_contig73.14936.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig73.14936.1
Unique Nameprot_C-linearis_contig73.14936.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length242
Homology
BLAST of mRNA_C-linearis_contig73.14936.1 vs. uniprot
Match: D7FX13_ECTSI (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX13_ECTSI)

HSP 1 Score: 375 bits (964), Expect = 4.900e-130
Identity = 190/242 (78.51%), Postives = 207/242 (85.54%), Query Frame = 0
Query:    1 MGDPTTRTGTSTSNVPAKES-LSLTDAYLLLYNTACAVGWNLTMYKIGTALLEGGGVRDAVNATHNLVVALQLLSTLELVHAFVGLVRSNPMNIFMQVGGRDLALFSVVTAFPPVRDSPWVLVMFSAWATSEVIRYPFYALSIAGMCPPFLHWLRYTAFILLYPLGFAGELGTWIVGLPHIEAVGLPSVPGLPEGSTIYALYAYIVLAFVVGAPKLYMHMIRQRGKQLGGTAAAGGGKAKAS 241
            M   + RTGT  + V       SLTDAYLLLYN ACAVGWNLT+YKIG A+LEGG VRDAV ATH+ V ALQL+STLELVHAFVGLV+SNPMN+FMQV GRDLALFSVVTAFPPVRDSPWVL+MF+AWATSEVIRYPFYAL+IAGMCPP L WLRY+AF+LLYPLGFAGELGTWIVGLPHI+AVGLP VPGLPEGS+IY LYAYIV AF +GAPKLYMHM+RQR KQL      GGGK KAS
Sbjct:    1 MSAASARTGTDNTRVATYGGGPSLTDAYLLLYNGACAVGWNLTLYKIGGAILEGGDVRDAVEATHDYVAALQLVSTLELVHAFVGLVKSNPMNVFMQVFGRDLALFSVVTAFPPVRDSPWVLLMFTAWATSEVIRYPFYALNIAGMCPPVLQWLRYSAFVLLYPLGFAGELGTWIVGLPHIKAVGLPGVPGLPEGSSIYVLYAYIVFAFAIGAPKLYMHMLRQRKKQL-----QGGGKVKAS 237          
BLAST of mRNA_C-linearis_contig73.14936.1 vs. uniprot
Match: A0A835Z8Y0_9STRA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Y0_9STRA)

HSP 1 Score: 169 bits (428), Expect = 2.980e-49
Identity = 86/174 (49.43%), Postives = 114/174 (65.52%), Query Frame = 0
Query:   61 NATHNLVVALQLLSTLELVHAFVGLVRSNPMNIFMQVGGRDLALFSVVTAFPPVRDSPWVLVMFSAWATSEVIRYPFYALSIAGMCPPFLHWLRYTAFILLYPLGFAGELGTWIVGLPHIEAVGLPSVPGLPEGSTIYALYAYIVLAFVVGAPKLYMHMIRQRGKQLGGTAAAG 234
            NAT  LVV LQLLSTLELVH  +GL R      F Q+GGRD+ LF    A P VR S    ++++ WA SE+IRYP+YA ++  +CP FLHWLRY+AF+LLYPLGFA E+G ++V  PH++A     + GLPEG     L AY++ A  +GA  L+ +M++ R +QL   A  G
Sbjct:   17 NATP-LVVGLQLLSTLELVHVLLGLTRGGAAQTFAQIGGRDICLFLTAAAEPAVRRSWVAALLYATWAASEIIRYPYYATNLLEICPDFLHWLRYSAFMLLYPLGFAAEVGCFVVAYPHMKAGDKYRIEGLPEGGQFAVLGAYMLFAHAIGALTLFKYMLKARKRQLRQPAVTG 189          
BLAST of mRNA_C-linearis_contig73.14936.1 vs. uniprot
Match: A0A2V0NKZ4_9CHLO (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NKZ4_9CHLO)

HSP 1 Score: 156 bits (394), Expect = 8.710e-44
Identity = 88/216 (40.74%), Postives = 120/216 (55.56%), Query Frame = 0
Query:   26 AYLLLYNTACAVGWNLTMYKIGTALLEGGGVRDAVNATHNLVVALQLLSTLELVHAFVGLVRSNPMNIFMQVGGRDLALFSVVTAFPPVRDSPWVLVMFSAWATSEVIRYPFYALSIAGMCPPFLHWLRYTAFILLYPLGFAGELGTWIVGLPHIEAVGLPSVPGLPEGSTIYALYAYIVLAFVVGAPKL----YMHMIRQRGKQLGGTAAAGGGK 237
            AYL+ YN A A GW + +Y+I  AL  GGG  +A  A       +Q ++ LE++HA  GLV SN +N FMQ  GR  AL+ +  A P +  +P   +M + W+  EV+RYP+YA + AG CP +L WLRYTAFI +YP G A E+      LP I   G+ SV  +P  +     YA  +   +   P L    Y  ++RQR K+LG    AG GK
Sbjct:    7 AYLVAYNAAQAAGWGVCLYQIAGALAAGGGPAEAYRAGAPSAAWMQCIAALEILHAATGLVPSNALNTFMQWLGRSNALYRIAQAIPELHANPAAALMLACWSLGEVVRYPWYAATAAGACPRWLTWLRYTAFIPIYPAGVAAEMVLMWRALPFIRRRGIFSV-AMPNAANFAFDYATFITVVLAAYPYLWWGLYSTLLRQRRKKLGPAEPAGAGK 221          
BLAST of mRNA_C-linearis_contig73.14936.1 vs. uniprot
Match: A0A2R6XKE6_MARPO (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XKE6_MARPO)

HSP 1 Score: 152 bits (384), Expect = 3.270e-42
Identity = 92/216 (42.59%), Postives = 123/216 (56.94%), Query Frame = 0
Query:   22 SLTDAYLLLYNTACAVGWNLTMYKIGTALLEGGGVRDAVNATHNLVVALQLLSTLELVHAFVGLVRSNPMNIFMQVGGRDLALFSVVTAFPPVRDSPWVLVMFSAWATSEVIRYPFYALSIAGMCPPFLHWLRYTAFILLYPLGFAGELGTWIVGLPHIEAVGLPSVPGLPEGSTIYALYAYIVLAFVVGAPKLY----MHMIRQRGKQLGGTAAA 233
            S+  AYL+ YN A AVGW + + K+G + ++ G    A  A  NLV ALQL + LE +HA  GLVRS  +   MQ GGR   L +V+   P  +  P V ++F+AW+ SEVIRYP YALS  G CP +L WLRYTAFILLYP G  GE+    + L  I    L S  G+  G  +   Y   VL  ++  P L+    +HM +QR  +L   ++A
Sbjct:    4 SIVKAYLVAYNAAQAVGWLVVLSKLGQSYVDTGDFNHAFVAAGNLVRALQLAAFLEFLHASFGLVRSGALTSLMQWGGRTHVLLAVIAKLPEAQVLPSVFIVFTAWSISEVIRYPQYALSSLGACPRWLLWLRYTAFILLYPAGIYGEMNAMYISLKPIADRQLYS--GI-FGQLLPFTYDKFVLGLLIAYPFLFVILFLHMFKQRRSKLSVRSSA 216          
BLAST of mRNA_C-linearis_contig73.14936.1 vs. uniprot
Match: A0A2P6VMZ8_9CHLO (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VMZ8_9CHLO)

HSP 1 Score: 143 bits (361), Expect = 8.850e-39
Identity = 89/212 (41.98%), Postives = 113/212 (53.30%), Query Frame = 0
Query:   27 YLLLYNTACAVGWNLTMYKIGTALLEGGGVRDAVNATHNLVVALQLLSTLELVHAFVGLVRSNPMNIFMQVGGRDLALFSVVTAFPPVRDSPWVLVMFSAWATSEVIRYPFYALSIAGMCPPFLHWLRYTAFILLYPLGFAGELGTWIVGLPHIEAVGLPSVPGLPEGSTIYALYAYIVLAFVVGAP----KLYMHMIRQRGKQLGGTAAAG 234
            YLL YN A A GW  + + +   +   G +R A  A    V   QL S LE+VHA +GLV  +P+   MQ  GR   LF VV A P V+    V  M +AWA SEV+RYP+YA  +AG CP +L WLRYTAFI LYP+G   E+      LP I    L SV  +P        Y   ++A +   P    +LY  + RQR K+LG  A AG
Sbjct:   11 YLLAYNCAQAAGWAYSGWLLAQHVAATGSLRGAYAAAGEPVRLFQLASALEIVHAALGLVGGSPVTALMQWAGRSNVLFGVVAAVPEVQPGLAVGAMLAAWAASEVVRYPWYAAGVAGACPHWLTWLRYTAFIPLYPIGVVVEMAAVYQALPLIRGRRLRSV-AMPNPFNFAFDYHTFLVALLALYPLLWFRLYSFLFRQRAKKLGPGAEAG 221          
BLAST of mRNA_C-linearis_contig73.14936.1 vs. uniprot
Match: A0A2P6TVL7_CHLSO (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=2 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TVL7_CHLSO)

HSP 1 Score: 150 bits (379), Expect = 6.430e-38
Identity = 86/204 (42.16%), Postives = 118/204 (57.84%), Query Frame = 0
Query:   38 GWNLTMYKIGTALLEGGGVRDAVNATHNLVVALQLLSTLELVHAFVGLVRSNPMNIFMQVGGRDLALFSVVTAFPPVRDSPWVLVMFSAWATSEVIRYPFYALSIAGMCPPFLHWLRYTAFILLYPLGFAGELGTWIVGLPHIEAVGLPSVPGLPEGSTIYALYAYIVLAFVVGAP----KLYMHMIRQRGKQLGGTAAAGGGK 237
            GW + +Y++G  ++    +  A     ++V   QL S LE++HA +GLV  +P+   MQ  GR   LF VV A P V++ P V  MF AWA SE+IRYP+YA S+AG CP +L WLRYTAFI LYP+G  GE+ +    LP I+A GL S+  LP  +     Y   ++  +   P    +LY  + RQR K+LG  AA  G K
Sbjct:  618 GWAVALYRVGGHVIATRSLEGAYTVAGDVVGCFQLASALEILHAALGLVGGSPLTALMQWAGRSNVLFGVVAAVPEVQNRPAVGAMFLAWALSEIIRYPWYAASLAGACPHWLTWLRYTAFIGLYPVGVLGEMKSVFDALPFIKARGLRSL-ALPNAANWGFDYHTFLVVLLCLYPFLWFRLYAFLFRQRRKKLGAPAAVAGSK 820          
BLAST of mRNA_C-linearis_contig73.14936.1 vs. uniprot
Match: E1Z3Z4_CHLVA (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z3Z4_CHLVA)

HSP 1 Score: 140 bits (354), Expect = 8.590e-38
Identity = 86/209 (41.15%), Postives = 114/209 (54.55%), Query Frame = 0
Query:   23 LTDAYLLLYNTACAVGWNLTMYKIGTALLEGGGVRDAVNATHNLVVALQLLSTLELVHAFVGLVRSNPMNIFMQVGGRDLALFSVVTAFPPVRDSPWVLVMFSAWATSEVIRYPFYALSIAGMCPPFLHWLRYTAFILLYPLGFAGELGTWIVGLPHIEAVGLPSVPGLPEGSTIYALYAYIVLAFVVGAP----KLYMHMIRQRGKQL 227
            L  AYLLLYN A   GW   +Y +   +     +        + V   QL S LE++HA VGLV  +P+   MQ  GR   LF VV A P V+++  V  M  AWA SEV RYP+YA ++ G CP +L W+RYTAFI LYP+G  GE+ +    LP I+  GL SVP LP  +     Y   ++A +   P    +LY  + RQR K+L
Sbjct:    6 LPKAYLLLYNVAQFGGWAFCLYHLLNHVDTTRSLEGTYAVAGDAVRLFQLASALEILHAAVGLVGGSPVTALMQWAGRSNVLFGVVGAVPEVQNTAAVGAMLLAWALSEVTRYPWYAANLVGACPRWLTWIRYTAFIPLYPVGVVGEMWSVYQALPFIKQRGLRSVP-LPNAANFAFDYPTFLVALMCVYPLLWFQLYSFLFRQRRKKL 213          
BLAST of mRNA_C-linearis_contig73.14936.1 vs. uniprot
Match: A0A250XGM8_9CHLO (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XGM8_9CHLO)

HSP 1 Score: 139 bits (351), Expect = 2.350e-37
Identity = 80/216 (37.04%), Postives = 125/216 (57.87%), Query Frame = 0
Query:   17 AKESLSLTDAYLLLYNTACAVGWNLTMYKIGTALLEGGGVRDAVNATHNLVVALQLLSTLELVHAFVGLVRSNPMNIFMQVGGRDLALFSVVTAFPPVRDSPWVLVMFSAWATSEVIRYPFYALSIAGMCPPFLHWLRYTAFILLYPLGFAGELGTWIVGLPHIEAVGLPSVPGLPEGSTIYALYAYIVLAFVVGAP----KLYMHMIRQRGKQLG 228
            ++ S +LT  YL +YN A A GW+L +  +  A+ +G G +  +  +   V   QL S +E++HA + +V S+ +  FMQ  GR   L +++ + P V+   +  +M + WA SEVIRYP+YAL+   +CP  L WLRYTAFI LYP+G   E+    + LP+++  G  S+ G+P  + I   Y+  + A +V  P     LY  ++RQR K+LG
Sbjct:    3 SRASATLT-CYLFVYNIAQATGWSLCLVSLLIAMSQGAGPQVLIQESGKFVRVFQLASAMEILHAAIKIVPSSAVLAFMQWAGRSHVLLAILLSVPEVQKHAFGPLMLAVWAASEVIRYPWYALNSIDICPQALTWLRYTAFIPLYPVGVVCEMALMALALPYLKEDGRWSI-GMPNKANIAFEYSTFIQALLVCYPFLWWGLYSSLLRQRNKKLG 216          
BLAST of mRNA_C-linearis_contig73.14936.1 vs. uniprot
Match: UPI001CFA8DD4 (very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 n=1 Tax=Mangifera indica TaxID=29780 RepID=UPI001CFA8DD4)

HSP 1 Score: 139 bits (351), Expect = 2.480e-37
Identity = 82/215 (38.14%), Postives = 120/215 (55.81%), Query Frame = 0
Query:   15 VPAKESLSLTDAYLLLYNTACAVGWNLTMYKIGTALLEGGGVRDAVNATHNLVVALQLLSTLELVHAFVGLVRSNPMNIFMQVGGRDLALFSVVTAFPPVRDSPWVLVMFSAWATSEVIRYPFYALSIAGMCPPFLHWLRYTAFILLYPLG-FAGELGTWIVGLPHIEAVGLPSVPGLPEGSTIYALYAYIVLAFVVGAPKLYMHMIRQRGKQLG 228
            VP    LS    YL  YN+  A+GW ++++ + +  L    +  A  +T  L+  LQ+ S LE++H  VG+V S  +  FMQ GGR L   S+V     V+  P V + F AW+ SEVIRYPFYAL+  G CP ++ +LRYTAFI+LYP+G F GE+      LP I+   L +        + Y     +++ +     KLY+H+ +QRG +LG
Sbjct:    5 VPTMSQLS--GLYLFTYNSLQALGWAVSLFSLLSNFLSTNSIHGAYESTGQLIWLLQICSFLEVIHGVVGIVPSGVLFPFMQWGGRTLFFLSIVRTIDEVQKLPSVFITFIAWSLSEVIRYPFYALNSIGTCPSWITYLRYTAFIVLYPIGLFPGEMWLMYEALPCIKKKNLFADFFGVLPFSYYNFLRVMLVCYPFLWLKLYLHLFKQRGSKLG 217          
BLAST of mRNA_C-linearis_contig73.14936.1 vs. uniprot
Match: A0A3B5ZYJ9_WHEAT (Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase n=8 Tax=Pooideae TaxID=147368 RepID=A0A3B5ZYJ9_WHEAT)

HSP 1 Score: 139 bits (350), Expect = 2.960e-37
Identity = 79/203 (38.92%), Postives = 118/203 (58.13%), Query Frame = 0
Query:   27 YLLLYNTACAVGWNLTMYKIGTALLEGGGVRDAVNATHNLVVALQLLSTLELVHAFVGLVRSNPMNIFMQVGGRDLALFSVVTAFPPVRDSPWVLVMFSAWATSEVIRYPFYALSIAGMCPPFLHWLRYTAFILLYPLGFA-GELGTWIVGLPHIEAVGLPSVPGLPEGSTIYALYAYIVLAFVVGAPKLYMHMIRQRGKQLG 228
            YLL YN+  A+GW+L + ++   L     VR A  A  +L+  LQ  + LE VHA VGLV ++P   F+Q GGR   + +++   P V+ SP V + F AW+ SEVIRY  YAL+   +CP ++ +LRYTAFI LYP+G   GE+ T    LP ++  GL S        + ++    ++L + +   KLY+H+ +QR  +LG
Sbjct:    8 YLLAYNSVQAIGWSLALLRLLPCLAPPVSVRPAYAAAGDLICFLQTCAVLETVHAAVGLVPTSPFLAFLQWGGRTHFILALLRQIPEVQGSPSVFITFMAWSISEVIRYSHYALTTLKVCPAWMTYLRYTAFIPLYPIGVGPGEMWTMYQALPFVKERGLYSGFFAKFSMSYHSFLVGVLLCYPLLWLKLYLHVFKQRKSKLG 210          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig73.14936.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX13_ECTSI4.900e-13078.51Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A835Z8Y0_9STRA2.980e-4949.43Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A2V0NKZ4_9CHLO8.710e-4440.74Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A2R6XKE6_MARPO3.270e-4242.59Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A2P6VMZ8_9CHLO8.850e-3941.98Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A2P6TVL7_CHLSO6.430e-3842.16Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
E1Z3Z4_CHLVA8.590e-3841.15Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A250XGM8_9CHLO2.350e-3737.04Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
UPI001CFA8DD42.480e-3738.14very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]
A0A3B5ZYJ9_WHEAT2.960e-3738.92Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007482Protein-tyrosine phosphatase-like, PTPLAPFAMPF04387PTPLAcoord: 71..228
e-value: 9.2E-46
score: 155.6
IPR007482Protein-tyrosine phosphatase-like, PTPLAPANTHERPTHR11035PTPLA DOMAIN PROTEINcoord: 16..231
NoneNo IPR availablePANTHERPTHR11035:SF35VERY-LONG-CHAIN (3R)-3-HYDROXYACYL-COA DEHYDRATASEcoord: 16..231
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..112
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 151..156
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 157..176
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 196..216
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 132..150
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 113..131
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 87..92
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 177..195
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..65
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 217..241
NoneNo IPR availableTMHMMTMhelixcoord: 195..217
NoneNo IPR availableTMHMMTMhelixcoord: 158..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig73contigC-linearis_contig73:130907..133652 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig73.14936.1mRNA_C-linearis_contig73.14936.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig73 130698..134419 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig73.14936.1 ID=prot_C-linearis_contig73.14936.1|Name=mRNA_C-linearis_contig73.14936.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=242bp
MGDPTTRTGTSTSNVPAKESLSLTDAYLLLYNTACAVGWNLTMYKIGTAL
LEGGGVRDAVNATHNLVVALQLLSTLELVHAFVGLVRSNPMNIFMQVGGR
DLALFSVVTAFPPVRDSPWVLVMFSAWATSEVIRYPFYALSIAGMCPPFL
HWLRYTAFILLYPLGFAGELGTWIVGLPHIEAVGLPSVPGLPEGSTIYAL
YAYIVLAFVVGAPKLYMHMIRQRGKQLGGTAAAGGGKAKAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007482Tyr_Pase-like_PTPLA