prot_C-linearis_contig73.14935.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig73.14935.1
Unique Nameprot_C-linearis_contig73.14935.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length148
Homology
BLAST of mRNA_C-linearis_contig73.14935.1 vs. uniprot
Match: D7FX12_ECTSI (Ribosomal_L18e/L15P domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX12_ECTSI)

HSP 1 Score: 252 bits (644), Expect = 2.870e-84
Identity = 125/145 (86.21%), Postives = 129/145 (88.97%), Query Frame = 0
Query:    2 PSRFSKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRRFHLLRNREHCPIVNLDKLWSMLPEGTMEQAKAAGGKAPVIDVTDNGYFKVLGKGKLPAVPIIVKAKTFSKLAEHKIRAAGGACLLS 146
            PSRFSKNRKKRGHVSAGHGR+GKHRKHPGGRGNAGGQHHHRILFDKF             H+LRNREHCPIVNLDKLWSMLPEGTMEQAKA GGKAPVIDVTDNGYFKVLGKGKLPAVPIIV+AK FSKLAE KI+AAGGACLLS
Sbjct:    2 PSRFSKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHHHRILFDKFXXXXXXXXXXXXXHVLRNREHCPIVNLDKLWSMLPEGTMEQAKAGGGKAPVIDVTDNGYFKVLGKGKLPAVPIIVRAKIFSKLAEQKIKAAGGACLLS 146          
BLAST of mRNA_C-linearis_contig73.14935.1 vs. uniprot
Match: A0A7S2WUG5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUG5_9STRA)

HSP 1 Score: 247 bits (631), Expect = 2.950e-82
Identity = 119/147 (80.95%), Postives = 134/147 (91.16%), Query Frame = 0
Query:    2 PSRFSKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRRFHLLRNREHCPIVNLDKLWSMLPEGTMEQAKAAGG--KAPVIDVTDNGYFKVLGKGKLPAVPIIVKAKTFSKLAEHKIRAAGGACLLS 146
            P+RFSK RK RG VS+GHGRVGKHRKHPGGRGNAGGQHHHRILFDK+HPGYFGKVGMRRFHLLRNREHCPI+NLDKLWS+ PEGT +QAKAA G  +AP+IDVT +GYFKVLG+G LP VP+IVKAK F+KLAE KI+AAGGACL++
Sbjct:    2 PTRFSKTRKLRGEVSSGHGRVGKHRKHPGGRGNAGGQHHHRILFDKYHPGYFGKVGMRRFHLLRNREHCPILNLDKLWSLAPEGTFDQAKAAAGTGQAPLIDVTKSGYFKVLGRGDLPDVPVIVKAKFFTKLAEKKIKAAGGACLIT 148          
BLAST of mRNA_C-linearis_contig73.14935.1 vs. uniprot
Match: A0A6G0XSZ1_9STRA (Ribosomal_L18e/L15P domain-containing protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A6G0XSZ1_9STRA)

HSP 1 Score: 233 bits (593), Expect = 1.760e-76
Identity = 111/146 (76.03%), Postives = 129/146 (88.36%), Query Frame = 0
Query:    2 PSRFSKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRRFHLLRNREHCPIVNLDKLWSMLPEGTMEQA-KAAGGKAPVIDVTDNGYFKVLGKGKLPAVPIIVKAKTFSKLAEHKIRAAGGACLLS 146
            P+   KNRKKRGHVSAGHGR+GKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMR+FHLLRNR HCP VN++KLWS++ E   + A KA  GKAP+IDVT +GYFKVLGKG+LP++P+IVKAK FS+ AE+KI+A GGACLL+
Sbjct:    2 PTATHKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRQFHLLRNRYHCPTVNVEKLWSLVSEEVKDAAEKAKDGKAPIIDVTKSGYFKVLGKGRLPSIPVIVKAKYFSQEAENKIKAVGGACLLT 147          
BLAST of mRNA_C-linearis_contig73.14935.1 vs. uniprot
Match: A0A7S4ML89_9STRA (Hypothetical protein n=3 Tax=Odontellaceae TaxID=2749909 RepID=A0A7S4ML89_9STRA)

HSP 1 Score: 223 bits (568), Expect = 2.200e-72
Identity = 106/144 (73.61%), Postives = 124/144 (86.11%), Query Frame = 0
Query:    2 PSRFSKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRRFHLLRNREHCPIVNLDKLWSMLPEGTMEQAKAAGGKAPVIDVTDNGYFKVLGKGKLPAVPIIVKAKTFSKLAEHKIRAAGGACLL 145
            P+R  KNRKKRGHVSAGHGR+GKHRKHPGGRGNAGGQHHHRILFDK+HPGYFGKVGMR+FH+LRNR+HCP +N+D L+++  EG  E AK  GGKAPV+D+   GYFK+LG G++  VP+IVKAK FSKLAE KI+ AGGACLL
Sbjct:   24 PTRDHKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHHHRILFDKYHPGYFGKVGMRQFHVLRNRKHCPTLNIDHLFNVAGEGVYEAAKNGGGKAPVVDLVSKGYFKLLGSGEI-TVPVIVKAKYFSKLAEKKIKEAGGACLL 166          
BLAST of mRNA_C-linearis_contig73.14935.1 vs. uniprot
Match: A0A803LEZ0_CHEQI (Ribosomal_L18e/L15P domain-containing protein n=4 Tax=Pentapetalae TaxID=1437201 RepID=A0A803LEZ0_CHEQI)

HSP 1 Score: 220 bits (561), Expect = 1.280e-71
Identity = 111/145 (76.55%), Postives = 121/145 (83.45%), Query Frame = 0
Query:    3 SRFSKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRRFHLLRNREHCPIVNLDKLWSMLPEGTMEQAKAAGGKAPVIDVTDNGYFKVLGKGKLP-AVPIIVKAKTFSKLAEHKIRAAGGACLLS 146
            +R  KNRKKRGHVSAGHGR+GKHRKHPGGRGNAGG HHHRILFDK+HPGYFGKVGMR FH LRNR HCPIVN+DKLWSMLPE   E+A    GKAPVIDVT  GYFKVLGKG LP + PI+VKAK  SK+AE KI+  GGA LL+
Sbjct:    3 TRLKKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGMHHHRILFDKYHPGYFGKVGMRYFHKLRNRFHCPIVNIDKLWSMLPEDVKEKASKE-GKAPVIDVTQFGYFKVLGKGVLPDSKPIVVKAKLISKIAEKKIKENGGAVLLT 146          
BLAST of mRNA_C-linearis_contig73.14935.1 vs. uniprot
Match: A0A061SIX4_9CHLO (Large subunit ribosomal protein L27Ae n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SIX4_9CHLO)

HSP 1 Score: 217 bits (552), Expect = 3.010e-70
Identity = 102/139 (73.38%), Postives = 119/139 (85.61%), Query Frame = 0
Query:    7 KNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRRFHLLRNREHCPIVNLDKLWSMLPEGTMEQAKAAGGKAPVIDVTDNGYFKVLGKGKLPAVPIIVKAKTFSKLAEHKIRAAGGACLL 145
            KNRKKRGHVSAGHGR+GKHRKHP GRGNAGGQHHHRILFDK+HPGYFGKVGMR FHL +N+ HCPI+N+DKLW+++ E    +A     +APVIDVT +GYFKVLGKG+LP  P++VKAK FSKLAE KI+ AGGAC+L
Sbjct:    7 KNRKKRGHVSAGHGRIGKHRKHPSGRGNAGGQHHHRILFDKWHPGYFGKVGMRYFHLSKNKYHCPIINIDKLWTLVGEEKRLEAAKNTSQAPVIDVTQSGYFKVLGKGRLPKQPVVVKAKFFSKLAEAKIKEAGGACML 145          
BLAST of mRNA_C-linearis_contig73.14935.1 vs. uniprot
Match: A0A7S0FLV7_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FLV7_9STRA)

HSP 1 Score: 216 bits (550), Expect = 5.870e-70
Identity = 103/145 (71.03%), Postives = 121/145 (83.45%), Query Frame = 0
Query:    2 PSRFSKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRRFHLLRNREHCPIVNLDKLWSMLPEGTMEQAKAAGGKAPVIDVTDNGYFKVLGKGKLPAVPIIVKAKTFSKLAEHKIRAAGGACLLS 146
            P+R  K RKKRGHVS GHGR+GKHRKHPGGRGNAGGQHHHRIL DK+HPGYFGKVGMR+FH+LRNR HCP +N+DK+++   EG  + AK  GGKAPVID+   GYFK+LG G++  VP+IVKAK FSKLAE KI+ AGGAC+LS
Sbjct:    2 PTRLHKARKKRGHVSMGHGRIGKHRKHPGGRGNAGGQHHHRILMDKYHPGYFGKVGMRQFHVLRNRTHCPTINIDKIFNAAGEGVYDAAKNGGGKAPVIDLVSLGYFKLLGNGQID-VPVIVKAKFFSKLAEKKIKEAGGACILS 145          
BLAST of mRNA_C-linearis_contig73.14935.1 vs. uniprot
Match: A0A7S2SEU0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SEU0_9STRA)

HSP 1 Score: 216 bits (550), Expect = 6.060e-70
Identity = 108/144 (75.00%), Postives = 123/144 (85.42%), Query Frame = 0
Query:    2 PSRFSKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRRFHLLRNREHCPIVNLDKLWSMLPEGTMEQAK-AAGGKAPVIDVTDNGYFKVLGKGKLPAVPIIVKAKTFSKLAEHKIRAAGGACL 144
            P+R SKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHR L DK+HPGYFGKVGMR+FHL++NR  CP VNLDKL+++  EG  E AK A  GKAPV+D+ + GYFK+LG G++  VP+IVKAK FSKLAE KIRAAGGACL
Sbjct:    2 PTRLSKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRTLMDKYHPGYFGKVGMRQFHLMQNRGFCPTVNLDKLFNVAGEGVYEAAKNAEAGKAPVVDLVNLGYFKLLGNGQIN-VPVIVKAKYFSKLAEQKIRAAGGACL 144          
BLAST of mRNA_C-linearis_contig73.14935.1 vs. uniprot
Match: A0A7S1U1J2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U1J2_9STRA)

HSP 1 Score: 214 bits (544), Expect = 4.970e-69
Identity = 103/145 (71.03%), Postives = 117/145 (80.69%), Query Frame = 0
Query:    2 PSRFSKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRRFHLLRNREHCPIVNLDKLWSMLPEGTMEQAKAAGGKAPVIDVTDNGYFKVLGKGKLPAVPIIVKAKTFSKLAEHKIRAAGGACLLS 146
            P+R  KNRKKRGHVSAGHGR+GKHR HPGGRGNAGGQHHHRILFDK+         MR+FH ++NRE CP VN+DK+W MLPEGT+E  K AGGKAPV+D+   G FKVLGKG+LP  PIIVKAK FSK AE KI+AAGGACLL+
Sbjct:    2 PTRLHKNRKKRGHVSAGHGRIGKHRSHPGGRGNAGGQHHHRILFDKYXXXXXXXXXMRQFHKMKNREFCPTVNVDKIWGMLPEGTLEATKTAGGKAPVLDLVKLGVFKVLGKGRLPEAPIIVKAKYFSKEAEKKIKAAGGACLLT 146          
BLAST of mRNA_C-linearis_contig73.14935.1 vs. uniprot
Match: B7FQU7_PHATC (Predicted protein n=3 Tax=Naviculales TaxID=38748 RepID=B7FQU7_PHATC)

HSP 1 Score: 213 bits (543), Expect = 6.840e-69
Identity = 103/145 (71.03%), Postives = 121/145 (83.45%), Query Frame = 0
Query:    2 PSRFSKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRILFDKFHPGYFGKVGMRRFHLLRNREHCPIVNLDKLWSMLPEGTMEQAKAAGGKAPVIDVTDNGYFKVLGKGKLPAVPIIVKAKTFSKLAEHKIRAAGGACLLS 146
            P+   KNRKKRGHVSAGHGR+GKHRKHPGGRGNAGGQHHHRIL DK+HPGYFGK+GMR+FH+LRNR+  P  N+DKL+++  EG  E AK  GGKAPVID+   GYFK+LG G++  VP+IVKAK FSKLAE KI+ AGGACLL+
Sbjct:    2 PTAAHKNRKKRGHVSAGHGRIGKHRKHPGGRGNAGGQHHHRILMDKYHPGYFGKIGMRQFHVLRNRDFTPTANIDKLFNIAGEGVYEAAKNGGGKAPVIDLVSKGYFKLLGNGQIN-VPVIVKAKYFSKLAEKKIKEAGGACLLT 145          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig73.14935.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FX12_ECTSI2.870e-8486.21Ribosomal_L18e/L15P domain-containing protein n=2 ... [more]
A0A7S2WUG5_9STRA2.950e-8280.95Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6G0XSZ1_9STRA1.760e-7676.03Ribosomal_L18e/L15P domain-containing protein n=8 ... [more]
A0A7S4ML89_9STRA2.200e-7273.61Hypothetical protein n=3 Tax=Odontellaceae TaxID=2... [more]
A0A803LEZ0_CHEQI1.280e-7176.55Ribosomal_L18e/L15P domain-containing protein n=4 ... [more]
A0A061SIX4_9CHLO3.010e-7073.38Large subunit ribosomal protein L27Ae n=1 Tax=Tetr... [more]
A0A7S0FLV7_9STRA5.870e-7071.03Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
A0A7S2SEU0_9STRA6.060e-7075.00Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S1U1J2_9STRA4.970e-6971.03Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
B7FQU7_PHATC6.840e-6971.03Predicted protein n=3 Tax=Naviculales TaxID=38748 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.100.10.10coord: 58..147
e-value: 1.4E-36
score: 126.4
NoneNo IPR availablePANTHERPTHR1172160S RIBOSOMAL PROTEIN L27Acoord: 3..146
NoneNo IPR availablePANTHERPTHR11721:SF19coord: 3..146
IPR021131Ribosomal protein L18e/L15PPFAMPF00828Ribosomal_L27Acoord: 28..144
e-value: 2.1E-23
score: 83.4
IPR001196Ribosomal protein L15, conserved sitePROSITEPS00475RIBOSOMAL_L15coord: 109..140
IPR030878Ribosomal protein L15HAMAPMF_01341Ribosomal_L15coord: 1..146
score: 11.058
IPR036227Ribosomal L18e/L15P superfamilySUPERFAMILY52080Ribosomal proteins L15p and L18ecoord: 6..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig73contigC-linearis_contig73:126866..129864 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig73.14935.1mRNA_C-linearis_contig73.14935.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig73 126866..129864 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig73.14935.1 ID=prot_C-linearis_contig73.14935.1|Name=mRNA_C-linearis_contig73.14935.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=148bp
QPSRFSKNRKKRGHVSAGHGRVGKHRKHPGGRGNAGGQHHHRILFDKFHP
GYFGKVGMRRFHLLRNREHCPIVNLDKLWSMLPEGTMEQAKAAGGKAPVI
DVTDNGYFKVLGKGKLPAVPIIVKAKTFSKLAEHKIRAAGGACLLST*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021131Ribosomal_L18e/L15P
IPR001196Ribosomal_L15_CS
IPR030878Ribosomal_L15
IPR036227L18e/L15P_sf