prot_C-linearis_contig73.14934.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig73.14934.1
Unique Nameprot_C-linearis_contig73.14934.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length303
Homology
BLAST of mRNA_C-linearis_contig73.14934.1 vs. uniprot
Match: A0A6H5JVA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVA0_9PHAE)

HSP 1 Score: 221 bits (564), Expect = 7.230e-68
Identity = 100/160 (62.50%), Postives = 131/160 (81.88%), Query Frame = 0
Query:  144 PVPWGLRWPLLLLWNIACIGSLVVTLVWFTEDYVRQVQQGVKNFDIQAHGLIDFFMLVDQLLIADEFKLKHMVISQVYGVIYVVFSILWFYLAPEEDKYLYQDILDWDQNRKQACIWAGFSLAVVVPLAALVHFALYRLREALHGRFQHQRTAMLRRQAS 303
            PVP GLRW  L+LWNIACI SL+VT VW TEDYVRQV+QGVKNFD+QAHGL+ FFMLVDQLLIAD +KL HM+ +Q+YG++Y+ FS++WFY  PE++KYLY+D LDWD+NR QAC+  G ++ V+VP+A L+H  ++RLREAL+ R + +  A L+R+ S
Sbjct:   92 PVPRGLRWLQLVLWNIACIASLLVTFVWATEDYVRQVRQGVKNFDVQAHGLVAFFMLVDQLLIADTYKLGHMIFTQIYGLVYLAFSVVWFYNGPEDEKYLYEDTLDWDENRLQACLSGGVAVGVLVPIAGLLHLGVFRLREALYRRVRDKEIATLKREHS 251          
BLAST of mRNA_C-linearis_contig73.14934.1 vs. uniprot
Match: D7FX10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX10_ECTSI)

HSP 1 Score: 216 bits (550), Expect = 6.830e-67
Identity = 95/146 (65.07%), Postives = 122/146 (83.56%), Query Frame = 0
Query:  144 PVPWGLRWPLLLLWNIACIGSLVVTLVWFTEDYVRQVQQGVKNFDIQAHGLIDFFMLVDQLLIADEFKLKHMVISQVYGVIYVVFSILWFYLAPEEDKYLYQDILDWDQNRKQACIWAGFSLAVVVPLAALVHFALYRLREALHGR 289
            PVP GLRW  L+LWNIACI SL+VT VW +EDYVRQV+QG KNFD+QAHGL+ FFMLVDQLLIAD FKL HM+ +Q+YG++Y+ FS++WFY  PE++KYLY+D LDW +NR QAC+  G ++ V+VP+A L+H  ++RLREAL+GR
Sbjct:   10 PVPRGLRWLQLVLWNIACIASLLVTFVWASEDYVRQVRQGTKNFDVQAHGLVAFFMLVDQLLIADTFKLGHMIFTQIYGLVYLAFSVIWFYKGPEDEKYLYEDTLDWGENRLQACLSGGVAVGVLVPIAGLLHLVVFRLREALYGR 155          
BLAST of mRNA_C-linearis_contig73.14934.1 vs. uniprot
Match: A0A6H5JSI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI9_9PHAE)

HSP 1 Score: 181 bits (458), Expect = 8.260e-52
Identity = 114/299 (38.13%), Postives = 155/299 (51.84%), Query Frame = 0
Query:    7 RAGTSRFLVQGAFVAYKFVLAAYFAFWAVYWPRVEGFREQAVHQLTFWTWDVCTGYFIISTVAALVCWRAMRRN--SGPVTAPPPPASPKEKNAQPSREGQGVDSNPPVQAPSSTTLPTPTATTSEGIGSQAQTCGGGSPVPWGLRWPLLLLWNIACIGSLVVTLVWFTEDYVRQVQQGVKNFDIQAHGLIDFFMLVDQLLIADEFKLKHMVISQVYGVIYVVFSILWFYLAPEEDKYLYQDILDWDQNRKQACIWAGFSLAVVVPLAALVHFALYRLREAL-HGRFQHQRTAMLRRQA 302
            R GTSRFL QG FV YK  LA YF +WA++W  V+ +       LT WTW   T YF++S ++A +CWRA+     SGPV                 R+G      P    PS  T                   G   PVP  LR   L LW+ ACI SL+V  +++   Y       +   D QAH  +   ML+DQ L+ADEFKL++++  Q +GVIY+ F++ W+YLAP++D+ +Y  ILDW+ N   ACI+A  ++ V  PL  LVHF ++RLRE + H R      A    QA
Sbjct:   17 RIGTSRFLPQGMFVLYKLGLAVYFLYWAIFWRAVKDYNTGRF--LTHWTWYATTTYFVVSALSAFLCWRAIAVTVASGPV-----------------RDGDPAFDAPTSSRPSDRT-------------------GSPQPVPAALRHLQLALWSTACIVSLIVVSIFWGALYDGDK---LTTVDEQAHVFVACIMLLDQFLVADEFKLRYVLFPQAFGVIYIFFNVGWYYLAPDDDRLIYI-ILDWEDNTLGACIYAFGAILVGAPLFGLVHFGIFRLRERVYHNRLARSSKAAAEAQA 273          
BLAST of mRNA_C-linearis_contig73.14934.1 vs. uniprot
Match: D7G736_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G736_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 1.720e-28
Identity = 86/283 (30.39%), Postives = 142/283 (50.18%), Query Frame = 0
Query:    6 LRAGTSRFLVQGAFVAYKFVLAAYFAFWAVYWPRVEGFREQAVHQLTFWTWDVCTGYFIISTVAALVCWRAMRRNSGPVTAPPPPASPKEKNAQPSREGQGVDSNPPVQAPSSTTLPTPTATTSEGIGSQAQTCGGGSPVPWGLRWPLLLLWNIACIGSLVVTLVWFTEDYVRQVQQGVKNFDIQAHGLIDFFMLVDQLLIADEFKLKHMVISQVYGVIYVVFSILWFYLAPEEDKYLYQDILDWDQNRKQACIWAGFSLAVVVPLAALVHFALYRLREALHG 288
            LRA TSRFL  G FVA+K +  AYF  W   WP    +    +   T+W W   T YF +S   A   +R   R S    A     +P   +A     G G D   P  +  +  + TP   T               P+   +    L  WN+AC+GSL V +++++  Y       + + D+ AH LI F M+ DQ+L+A  F+++ M  ++V+ + Y+V+S+LW++L  E    L   ILDWD++  +A  ++   + V++P  +++H+ ++RLRE+++ 
Sbjct:   13 LRAATSRFLKPGPFVAFKGLFVAYFLIWCFLWPL--DYTSMYLFA-TYWVWYTGTAYFALSFATACAHFR---RWSAATQA----RAPDNGSA-----GGGSDRPGPSWSNLTGDVSTPALRTRI------------HPLEQAVLAIQLFTWNVACLGSLFVAIIYWSSLYTGTP---ITSVDMNAHTLIAFVMVADQMLVATPFRIRDMWKAEVFAITYLVYSLLWYFLEQE----LIYVILDWDRHFWEAFSYSVAGIFVLIPATSVLHYYIFRLRESIYA 261          
BLAST of mRNA_C-linearis_contig73.14934.1 vs. uniprot
Match: D7G734_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G734_ECTSI)

HSP 1 Score: 108 bits (271), Expect = 1.450e-25
Identity = 59/148 (39.86%), Postives = 89/148 (60.14%), Query Frame = 0
Query:  140 GGGSPVPWGLRWPLLLLWNIACIGSLVVTLVWFTEDYVRQVQQGVKNFDIQAHGLIDFFMLVDQLLIADEFKLKHMVISQVYGVIYVVFSILWFYLAPEEDKYLYQDILDWDQNRKQACIWAGFSLAVVVPLAALVHFALYRLREALH 287
            G   PVP  LR   L+LW+ ACIGSL+V  +++                          +L+DQ L+ADEFKL++++  Q +GVIY+ F++ W+YLAP++D+ +Y  ILDW+ N   ACI+A  ++ V  PL  LVH  L+RLRE+++
Sbjct:   10 GSPQPVPAVLRHLQLVLWSTACIGSLIVVTIFWGA------------------------LLLDQFLVADEFKLRYILFPQAFGVIYLFFNVGWYYLAPDDDRLIYI-ILDWEDNTLGACIYAFGAILVGAPLFGLVHLGLFRLRESVY 132          
BLAST of mRNA_C-linearis_contig73.14934.1 vs. uniprot
Match: UPI001B88D388 (uncharacterized protein LOC121369499 n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88D388)

HSP 1 Score: 78.6 bits (192), Expect = 4.320e-13
Identity = 51/158 (32.28%), Postives = 83/158 (52.53%), Query Frame = 0
Query:  139 CGGGSPVPWGLR--WPLLLLWNIACIGSLVVTLVWFTEDYVR-QVQQGVKNFD---IQAHGLIDFFMLVDQLLIADEFKLKHMVISQVYGVIYVVFSILWFYLAPEEDKYLYQDILDWDQNRKQACIWAGFSLAV-------VVPLAALVHFALYRLR 283
            C   + +PW L   W   +LWNI  + ++VVT ++F   Y + Q+++G    D   +  H L   F+  D ++ A   +L H+V   VYG++Y +FSIL++  +      +Y+D+LDW+         AGF+  V       ++PL    +FALYRLR
Sbjct:  140 CFSKNRMPWYLNTSW---ILWNIVSVNAIVVTAIYFGALYNKLQIERGHPGIDYDNVNVHALNTVFVFADVVVCARPVRLLHVVYPIVYGLVYAIFSILFW--SVNHSNVIYKDVLDWNH--------AGFTTGVLAVVAFFIMPLLQCCYFALYRLR 284          
BLAST of mRNA_C-linearis_contig73.14934.1 vs. uniprot
Match: A0A2T7NUC3_POMCA (Uncharacterized protein n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NUC3_POMCA)

HSP 1 Score: 70.9 bits (172), Expect = 3.600e-10
Identity = 41/139 (29.50%), Postives = 77/139 (55.40%), Query Frame = 0
Query:  149 LRWPLLLLW---NIACIGSLVVTLVWFTEDY-VRQVQQGVKNFDIQAHGLIDFFMLVDQLLIADEFKLKHMVISQVYGVIYVVFSILWFYLAPEEDKYLYQDILDWDQNRKQACIWAGFSLAVVVPLAALVHFALYRLR 283
            L W + L W   NI  + S++VT+++F+  +  +     V   D+  H L   FM++D ++ A   ++ H++   +YGV YV+FS++++   PE +  +Y+ +LDW        +  G ++ + +PL  L+ FA Y+LR
Sbjct:  229 LPWYIQLYWLLGNIVQVFSVIVTVIYFSVLFPAKPDHSSVSLHDVNVHMLNTGFMVLDAMIGARPVRMLHVIYPLLYGVAYVIFSVIYWSRDPEHNV-VYKKVLDWSHPGLTVGVVCGLAV-IAIPLLQLLFFAAYQLR 365          
BLAST of mRNA_C-linearis_contig73.14934.1 vs. uniprot
Match: A0A8B8B014_CRAVI (protein rolling stone-like n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8B014_CRAVI)

HSP 1 Score: 66.2 bits (160), Expect = 1.080e-8
Identity = 38/140 (27.14%), Postives = 77/140 (55.00%), Query Frame = 0
Query:  146 PWGLRWPLLLLWNIACIGSLVVTLVWFTEDYVRQVQQGVKNFDIQAHGLIDFFMLVDQLLIADEFKLKHMVISQVYGVIYVVFSILWFYLAPEEDKYLYQDILDWDQNRKQA--CIWAGFSLAVVVPLAALVHFALYRLR 283
            PW L+  + +L+NIA +GS++VTL +F   +       +   ++Q HG+    + ++ +L A   +L H + + +YG+ Y++FS +++ +  +    +Y  +LDW +  + A  C+  GF   V +P    + F +Y++R
Sbjct:  178 PWYLK-TVWILFNIASLGSVLVTLTFFIFLWPLFKTSSIGLINLQLHGINSVIIGIELMLTAVPCRLYHFIYALIYGIAYLIFSAIFYAVGNKIP--IYPGVLDWSKPGQTALICVLLGF---VFMPFLQFIFFIMYKVR 311          
BLAST of mRNA_C-linearis_contig73.14934.1 vs. uniprot
Match: UPI000B45E8A1 (protein rolling stone-like n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=UPI000B45E8A1)

HSP 1 Score: 64.7 bits (156), Expect = 3.500e-8
Identity = 76/290 (26.21%), Postives = 130/290 (44.83%), Query Frame = 0
Query:   19 FVAYKFVLAAYFAFWAVYWPRVE--------GFREQAVHQLTFWTWDVCTGY---------FIISTVAALVCWRAMRRNSGPVTAPPPPASPKEKNAQPSREGQGVDSNPPVQAPSSTTLPTPTATTSEGIGSQAQTCGGGSPVPWGLRWPLLLLWNIACIGSLVVTLVWFTEDY--VRQVQQGVKNFDIQAHGLIDFFMLVDQLLIADEFKLKHMVISQVYGVIYVVFSILWFYLAPEEDKYLYQDILDWDQNRK-QACIWAGFSLAVVVPLAALVHFALYRLREALHG 288
            ++ Y+ V+A Y  FW +Y   VE        G     V+ LT WT+ +   Y         F + T  A++ WR +     PV+     A   E    PS  G   +             P P+    +G  +  +T    + +P+  +   +LL NI    S++VTL++F   +  +    Q +   ++Q HG+    + ++ LL A    L H V    YG++Y+VF+ + FY A  +D  +Y ++LDW+ ++  Q  I       V++PL  +  F +YRL+  L+G
Sbjct:   64 YLLYRLVIAVYADFWLIY-TAVEYGSVAPGNGLYAWPVY-LTNWTYTMLCLYLTLHALTTLFFLCTSPAILWWRRL-----PVSQHC--ALFTELEVHPSLWGDDYE-------------PIPSHDNEDGELTYGETSTRSNLMPFYFKLVWVLL-NIMSSCSVMVTLIFFIFLWPQMNTDNQPIDLGNLQLHGINSVIVFLECLLTAAPVHLLHFVFPLTYGIVYLVFTAI-FYGAGNKDP-IYPEVLDWNSDKVGQTMIMVLVVGFVILPLLQVFFFIIYRLKLWLYG 328          
BLAST of mRNA_C-linearis_contig73.14934.1 vs. uniprot
Match: UPI001E1D5507 (protein rolling stone-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5507)

HSP 1 Score: 60.8 bits (146), Expect = 5.830e-7
Identity = 69/287 (24.04%), Postives = 114/287 (39.72%), Query Frame = 0
Query:   22 YKFVLAAYFAFWAVYWPR---VEGFREQAVHQ---LTFWTWDVCTGYFIISTVAALV---------CWRAMRRNSGPVTAPPPPASPKEKNAQPS----REGQGVDSNPPVQAPSSTTLPTPTATTSEGIGSQAQTCGGGSPVPWGLRWPLLLLW---NIACIGSLVVTLVWFTEDYVRQVQQGVK-NFDIQAHGLIDFFMLVDQLLIADEFKLKHMVISQVYGVIYVVFSILWFYLAPEEDKYLYQDILDWDQ--NRKQACIWAGFSLAVVVPLAALVHFALYRLR 283
            Y+F++AAY  FW +Y  R   V    +  +     LT WT+ V T Y ++  ++ L+         C R    N   +          E   QPS    RE   +    P +                    + +T          L W   L+W   NIA    +++TL ++   Y      G +   +IQ HG+    ++++  + A   +L H V +  YG++Y +FS +  Y A +    LY  +LDW +  N     + A F   + +PL  L  F +Y+ R
Sbjct:   44 YRFIVAAYCIFWLIYTSRYGAVVVLNDTEIPMFAFLTTWTYFVLTVYLLLHFLSCLLYACRRGGAMCGRLSSENHRHIF--------HELQVQPSLWASREYDTIPGTDPDEV----------------FSDEMRTIK--------LSWLTKLIWILYNIASNACILITLAFWILLYPGMEMSGKELMINIQLHGITSVIIMIEICISAVPIRLLHFVYTLAYGLLYYLFSGI--YYAVDHKHVLYPHVLDWSEPGNTVIVMVLAAF---IALPLVQLFLFGIYKFR 293          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig73.14934.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 14
Match NameE-valueIdentityDescription
A0A6H5JVA0_9PHAE7.230e-6862.50Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FX10_ECTSI6.830e-6765.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JSI9_9PHAE8.260e-5238.13Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G736_ECTSI1.720e-2830.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7G734_ECTSI1.450e-2539.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI001B88D3884.320e-1332.28uncharacterized protein LOC121369499 n=1 Tax=Gigan... [more]
A0A2T7NUC3_POMCA3.600e-1029.50Uncharacterized protein n=1 Tax=Pomacea canalicula... [more]
A0A8B8B014_CRAVI1.080e-827.14protein rolling stone-like n=1 Tax=Crassostrea vir... [more]
UPI000B45E8A13.500e-826.21protein rolling stone-like n=1 Tax=Mizuhopecten ye... [more]
UPI001E1D55075.830e-724.04protein rolling stone-like n=1 Tax=Mercenaria merc... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12242UNCHARACTERIZEDcoord: 18..294
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 174..188
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 75..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 257..280
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 219..237
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 208..218
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..74
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 281..303
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 153..173
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 189..207
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 238..256
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availableTMHMMTMhelixcoord: 151..173
NoneNo IPR availableTMHMMTMhelixcoord: 50..72
NoneNo IPR availableTMHMMTMhelixcoord: 215..237
NoneNo IPR availableTMHMMTMhelixcoord: 258..280
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
IPR039860Protein rolling stonePANTHERPTHR12242:SF1LD06593P-RELATEDcoord: 18..294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig73contigC-linearis_contig73:109527..112336 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig73.14934.1mRNA_C-linearis_contig73.14934.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig73 109506..112336 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig73.14934.1 ID=prot_C-linearis_contig73.14934.1|Name=mRNA_C-linearis_contig73.14934.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=303bp
MGGTELRAGTSRFLVQGAFVAYKFVLAAYFAFWAVYWPRVEGFREQAVHQ
LTFWTWDVCTGYFIISTVAALVCWRAMRRNSGPVTAPPPPASPKEKNAQP
SREGQGVDSNPPVQAPSSTTLPTPTATTSEGIGSQAQTCGGGSPVPWGLR
WPLLLLWNIACIGSLVVTLVWFTEDYVRQVQQGVKNFDIQAHGLIDFFML
VDQLLIADEFKLKHMVISQVYGVIYVVFSILWFYLAPEEDKYLYQDILDW
DQNRKQACIWAGFSLAVVVPLAALVHFALYRLREALHGRFQHQRTAMLRR
QAS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039860Rost