prot_C-linearis_contig7.14637.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14637.1
Unique Nameprot_C-linearis_contig7.14637.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length576
Homology
BLAST of mRNA_C-linearis_contig7.14637.1 vs. uniprot
Match: D7FTX4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTX4_ECTSI)

HSP 1 Score: 325 bits (833), Expect = 4.470e-103
Identity = 231/430 (53.72%), Postives = 260/430 (60.47%), Query Frame = 0
Query:  153 FEAPATPGCYSPRVDMIGNQQQPPQHGFNDGTIPAPKGYSRPQLQQXXXXXXXXXXXVLHRARSLPAEEGRGGE----AAVIIPSGYDGMGMPSPRRGITPQNRSFNAPVTVAMPLREGPLQTSMQVTLSTPPATPPAGLRLQMCGAADAPMSAPVTPVMVYAYPHGYMMAYPPVNVQSVQTPRSARSQASKAWDPYECVSPSGESTQTGFGRRGKETRALSLESSPAASSSSRMSMSSRESLTKPDGDGQDDGALSQGQRSRASSVLSDVIERGFYDDSDNAQQDGDENRPVAVXXXXXXXXXXXXXXXLSELQGNNTSKSGEVNTPCRNEARGSSISSAGGAVDGDGDDKEN----AGSAGGGXXXXXXXXXXXXXXXVGGSVADKQLSGQKRGGGDIEIEKQKSFTGSYFQVSPGSFLQSSKRQRNF 574
            FEAPATPG  SP + M+G + Q                      Q XXXXXX     VL R  SLPAE+  GGE    AAV      DG    SPR G+ PQ+RSF AP+ + +PL+    Q  MQ   + PP  PPAGLRLQMCG  + PMSAPVTPVMVYA  HGYMMAYPPVNV SVQTPRS RSQASKAWDPYECVSPSGEST  GFGRRGKET  LS E SP A SS+ MS+SSR SL+K  G G DD   SQG RSRASSV+SDVIE G    +D+++Q+   ++P                  L  L+G   ++ G   TP R   R S  +SAGG    DG+DKEN    AG  GGG                    A KQLSGQKR GGDI+IEKQKSFTGSYFQVSP SFLQSSKRQRNF
Sbjct:    2 FEAPATPGLQSPSLTMVGGRDQR-------------------LAQXXXXXXXWQQHPVLRRTHSLPAEDESGGEPVAAAAVASTGRLDGNDRASPRGGVAPQSRSFGAPLAMPVPLQAPRAQGCMQ---APPPNAPPAGLRLQMCGLTNTPMSAPVTPVMVYAPGHGYMMAYPPVNVPSVQTPRSTRSQASKAWDPYECVSPSGESTHAGFGRRGKETPDLSPEGSPVALSSA-MSVSSRGSLSKQGGRGDDD--ASQGLRSRASSVISDVIEGGVL--NDDSRQNKASSQPSLANPA------------LLPLEGKTDNEDGSYKTPIR--LRLSCETSAGGTAT-DGEDKENSQVGAGFVGGGKKREGEAVLE----------AKKQLSGQKRAGGDIDIEKQKSFTGSYFQVSPSSFLQSSKRQRNF 379          
BLAST of mRNA_C-linearis_contig7.14637.1 vs. uniprot
Match: A0A6H5KL22_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL22_9PHAE)

HSP 1 Score: 106 bits (264), Expect = 4.420e-23
Identity = 93/196 (47.45%), Postives = 107/196 (54.59%), Query Frame = 0
Query:  383 MSMSSRESLTKPDGDGQDDGALSQGQRSRASSVLSDVIERGFYDDSDNAQQDGDENRPVAVXXXXXXXXXXXXXXXLSELQGNNTSKSGEVNTPCRNEARGSSISSAGGAVDGDGDDKEN----AGSAGGGXXXXXXXXXXXXXXXVGGSVADKQLSGQKRGGGDIEIEKQKSFTGSYFQVSPGSFLQSSKRQRNF 574
            MS+SSR SL+K    G DD   SQG RSRASSV+SDVIE G  +D D+ Q   +    +A+               L  L+G   ++ G   TP R   R S  +SAGG    DG DKEN    AG  GGG                    A KQ+SGQKR GGDIE  KQKSFTGSYFQVSP SFL+SSKRQRNF
Sbjct:    1 MSVSSRGSLSKQGARGDDD--ASQGLRSRASSVISDVIEGGGLND-DSRQNKANSQPSLAIPA-------------LLPLEGKTDNEDGSYKTPSR--VRLSCETSAGGTA-ADGADKENSQVGAGLVGGGKKREGDAALE----------AKKQISGQKRTGGDIE--KQKSFTGSYFQVSPSSFLKSSKRQRNF 165          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14637.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTX4_ECTSI4.470e-10353.72Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KL22_9PHAE4.420e-2347.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 80..109
NoneNo IPR availablePANTHERPTHR14445:SF41coord: 128..503
NoneNo IPR availablePANTHERPTHR14445GRB10 INTERACTING GYF PROTEINcoord: 128..503

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:3919023..3924943 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14637.1mRNA_C-linearis_contig7.14637.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 3918816..3926124 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14637.1 ID=prot_C-linearis_contig7.14637.1|Name=mRNA_C-linearis_contig7.14637.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=576bp
MPQHCGGVQQYMAGELVLPSPSRHRIELAGPQPSPRGPPRQHWQSGQPHH
PGALSLPRCTNAMPARAPQCPSPVVKVPIYSTLSEAIEHQQKKQQQQQQQ
QQRQQQQRQQVHQIRAMLPPPPPPPPPPPPPSLSSRASPGRHAAQGKTTS
FTFEAPATPGCYSPRVDMIGNQQQPPQHGFNDGTIPAPKGYSRPQLQQQQ
QQQQQQQQQVLHRARSLPAEEGRGGEAAVIIPSGYDGMGMPSPRRGITPQ
NRSFNAPVTVAMPLREGPLQTSMQVTLSTPPATPPAGLRLQMCGAADAPM
SAPVTPVMVYAYPHGYMMAYPPVNVQSVQTPRSARSQASKAWDPYECVSP
SGESTQTGFGRRGKETRALSLESSPAASSSSRMSMSSRESLTKPDGDGQD
DGALSQGQRSRASSVLSDVIERGFYDDSDNAQQDGDENRPVAVAVAVASS
AKPTLSLSLSELQGNNTSKSGEVNTPCRNEARGSSISSAGGAVDGDGDDK
ENAGSAGGGKRGEGSSGGGGDGFGVGGSVADKQLSGQKRGGGDIEIEKQK
SFTGSYFQVSPGSFLQSSKRQRNFT*
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