prot_C-linearis_contig7.14611.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14611.1
Unique Nameprot_C-linearis_contig7.14611.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length410
Homology
BLAST of mRNA_C-linearis_contig7.14611.1 vs. uniprot
Match: D7G1Z1_ECTSI (C2H2 and CCCH zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Z1_ECTSI)

HSP 1 Score: 260 bits (664), Expect = 6.190e-83
Identity = 123/164 (75.00%), Postives = 139/164 (84.76%), Query Frame = 0
Query:    4 MEDDDETPTNLGGLYLGPVRRPLNADSEFFDAGNINRALLCKINVFAIISGGGDAMDFDDQQQTYECMFHGCSSTFPSLRRHEAHYETSHRNRCSTCGRSFPTHRLLDLHLSETHDSFFKAMAERRPMYACLVEGCTEVFQTSGKRHKHLVDSHRYPESFDFSR 167
            M D D   T  GGLYLGPV RPL++DSEFFD GN NRALLCK+NVFAI+S G DAMD  + Q  +ECMF  C++TF SL+RHE HYETSHR+RC TCGRSFPTHRLLDLHLSE HDSFF+AMAERRPMYACLVEGC EVF++SGKRH+HLV++H YPESFDFSR
Sbjct:    1 MVDADRRST--GGLYLGPVLRPLSSDSEFFDEGNTNRALLCKLNVFAIMSEGADAMDLHEDQHQFECMFQDCTATFSSLKRHEEHYETSHRHRCFTCGRSFPTHRLLDLHLSEAHDSFFRAMAERRPMYACLVEGCPEVFESSGKRHEHLVEAHLYPESFDFSR 162          
BLAST of mRNA_C-linearis_contig7.14611.1 vs. uniprot
Match: A0A836CFJ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFJ7_9STRA)

HSP 1 Score: 154 bits (389), Expect = 1.780e-39
Identity = 105/295 (35.59%), Postives = 145/295 (49.15%), Query Frame = 0
Query:    4 MEDDDETPTN-LGGLYLGPVRRPLNADSEFFDAGNINRALLCKINVF-AIISGGGDAMDFDDQQQT--YECMFHGCSSTFPSLRRHEAHYETSHRNRCSTCGRSFPTHRLLDLHLSETHDSFFKAMAERRPMYACLVEGCTEVFQTSGKRHKHLVDSHRYPESFDFSRPSYSRKETSTTKPKGENKTLKAAGTRSKSKSFTKAAGCGVKSDSRPASATTTEAAAIADATAAPSGAAFQNLVPSPTNRRPRQQEVIDARPQPVPPSLGAVAAKPRACKFWRTGAGCRAGSSCKFRH 294
            ME +   P + L  L+  P +R    D  FF+AG++ RA  CK++V   +     DA     +  T  + C   GC++TF S  R   HY+TSHR+ C+TCGR+F T RLLDLHLSE HDS+FKAMAE+R MY CLVEGC + F+ +  R  H++  H YP +FDF RP             G+  T+K      + +S       G  +D   A A  ++AAA               +V + + R  +                G  A + R C F+ T AGCR G+ C F H
Sbjct:   26 MEVEPPVPASALATLHTAPFKRRYQPDDPFFEAGDLARATACKMSVLHGLWDDEEDAQSAGGRAHTGGFACRIGGCNATFTSTARFNEHYDTSHRHTCATCGRAFITPRLLDLHLSELHDSYFKAMAEKRHMYECLVEGCGKKFKDNNGRRAHMIAVHHYPRAFDFHRPP------------GQKPTVKHHTGALRGRS-------GSAADQSQAPADQSDAAAA--------------IVVNQSERSKKHG--------------GKTAKRRRRCHFFDTAAGCRNGAECPFLH 273          
BLAST of mRNA_C-linearis_contig7.14611.1 vs. uniprot
Match: UPI000854ABAA (zinc finger protein 511 n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI000854ABAA)

HSP 1 Score: 134 bits (337), Expect = 3.830e-33
Identity = 69/164 (42.07%), Postives = 98/164 (59.76%), Query Frame = 0
Query:    8 DETPTNLGGLYLGPVRRPLNADSEFFDAGNINRALLCKINVFAIISGGGDAMDFDDQQQTYECMFHGCSSTFPSLRRHEAHYETSHRNRCSTCGRSFPTHRLLDLHLSETHDSFFKAMAERRPMYACLVEGCTEVFQTSGKRHKHLVDSHRYPESFDFSRPSYS 171
            +E P   G      VR   + D +FF+ G+++R L  +     +++G G+  +     + ++C   GCS  F +L  +E HY T HRN CSTC RSFP+ RLLD+H+ E HDS F+ MAE+  M+ CLVEGC E F+TSG+R  HL+ +H YP  F F +P  S
Sbjct:   25 EENPGKAGTFTPSTVR--FSRDHQFFEDGDVHRHLYLE----DVLTGIGEVEERSKVSE-FQCQTAGCSQVFDTLESYEHHYNTLHRNVCSTCKRSFPSARLLDIHILEWHDSLFEIMAEKTNMFQCLVEGCVEKFKTSGERKNHLIKTHLYPSDFRFDKPKKS 181          
BLAST of mRNA_C-linearis_contig7.14611.1 vs. uniprot
Match: UPI00053C1291 (zinc finger protein 511 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C1291)

HSP 1 Score: 129 bits (324), Expect = 3.330e-31
Identity = 69/172 (40.12%), Postives = 94/172 (54.65%), Query Frame = 0
Query:    9 ETPTNLGGLYLGPVRRPLNADSEFFDAGNINRALLCKINVFAIISGGGDAMDF--DDQQQTYECMFHGCSSTFPSLRRHEAHYETSHRNRCSTCGRSFPTHRLLDLHLSETHDSFFKAMAERR-PMYACLVEGCTEVFQTSGKRHKHLVDSHRYPESFDF---SRPSYSRKE 174
            ++P + G  Y  P+ R    DS FF +GN+ R LL K     +       +    +++ +   C   GC     SL   EAHY   H   CS C R +PT RLL +H+SETHDSFF+A  +R   MY CLVEGC   F+    RH+HLVD H++P +F+F   +RPS  R+E
Sbjct:    6 DSPPDFGFPYWAPLPRSFPPDSPFFSSGNVERELLAKQVALDLTEDERHQLQMIVENESRRISCPIVGCGERLSSLENFEAHYHARHAASCSVCTRVYPTSRLLSIHVSETHDSFFQAKVDRGYAMYECLVEGCGMKFKNYKARHQHLVDKHKFPTTFEFLKKARPSKKRRE 177          
BLAST of mRNA_C-linearis_contig7.14611.1 vs. uniprot
Match: A0A2R6X298_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X298_MARPO)

HSP 1 Score: 128 bits (322), Expect = 1.400e-30
Identity = 75/181 (41.44%), Postives = 104/181 (57.46%), Query Frame = 0
Query:    4 MEDDDETPTNLGG-------LYLGPVRRPLNADSEFFDAGNINRALLCKINVFAIISGGGDAMDFDDQQQTYE--CMFHGCSSTFPSLRRHEAHYETSHRNRCSTCGRSFPTHRLLDLHLSETHDSFFKAMAERR-PMYACLVEGCTEVFQTSGKRHKHLVDSHRYPESFDF-SRPSYSRK 173
            ME++++   N G         +    RR    D  FF AGN+ R L  K    +I      A+   ++++T +  C   GC +T  SL   E+HY ++HR  CS C   +PT RLL++H+SE HDSFFKA   R  PMY CLVEGC   FQT G+R +HLVDSHR+P++F F S+  +S+K
Sbjct:    1 MEEEEKKEENEGADLPLRNFPHWSAARRKFAPDCCFFSAGNLERELQAKQVSLSITDEEIAAISRLEEEETLQVRCPISGCGATLSSLSDFESHYSSAHRATCSVCFNVYPTTRLLNIHISECHDSFFKAKVARNYPMYECLVEGCPGRFQTDGRRLQHLVDSHRFPKTFRFHSKKHFSQK 181          
BLAST of mRNA_C-linearis_contig7.14611.1 vs. uniprot
Match: UPI001AAD1360 (zinc finger protein 511 isoform X1 n=2 Tax=Rana temporaria TaxID=8407 RepID=UPI001AAD1360)

HSP 1 Score: 125 bits (315), Expect = 5.640e-30
Identity = 63/144 (43.75%), Postives = 90/144 (62.50%), Query Frame = 0
Query:   29 DSEFFDAGNINRALLCKINVFAIISGGGDAMDFDDQQQTYECMFHGCSSTFPSLRRHEAHYETSHRNRCSTCGRSFPTHRLLDLHLSETHDSFFKAMAERRPMYACLVEGCTEVFQTSGKRHKHLVDSHRYPESFDFSRPSYSR 172
            D  FF+ G++ R L  +     +++G G+ ++   +   ++C   GC+  F +L  +E HY   HRN CSTC RSFP+ RLLD+H+ E HDS F+ MAE+  M+ CLVEGC E F+TSG+R  HLV +H YP  F F +P  S+
Sbjct:   44 DHRFFEDGDVYRHLYLE----DVLTGIGE-VEKKAKVSEFQCQTAGCAQVFDTLESYEHHYNALHRNVCSTCKRSFPSSRLLDIHILEWHDSLFEIMAEKSNMFQCLVEGCVEKFKTSGERKCHLVRTHLYPSDFRFDKPKKSK 182          
BLAST of mRNA_C-linearis_contig7.14611.1 vs. uniprot
Match: A0A8K1CJW5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJW5_PYTOL)

HSP 1 Score: 125 bits (315), Expect = 5.780e-30
Identity = 59/152 (38.82%), Postives = 86/152 (56.58%), Query Frame = 0
Query:   17 LYLGPVRRPLNADSEFFDAGNINRALLCKINVFAIISGGGDAMDFDDQQQTYECMFHGCSSTFPSLRRHEAHYETSHRNRCSTCGRSFPTHRLLDLHLSETHDSFFKAMAERRPMYACLVEGCTEVFQTSGKRHKHLVDSHRYPESFDFSRP 168
            L  G  RR  + +   F  GN  R      +    +    +    D++   ++C    C   F S+  +E HY+  HRN C  C RSF +HRL+D+H+SE HD+FF+ +++R+ MY CLV+GCTEVF+   KR +HLV  H+YP SF F +P
Sbjct:    7 LPSGKCRRRYSPEHALFTPGNALRTTTYYRDAGCDVPSDDEMDASDEKPALFQCRLFNCDKGFDSIAAYEEHYDLVHRNICHACYRSFLSHRLMDIHISEMHDAFFRILSKRQSMYVCLVDGCTEVFKHEDKRMRHLVKEHKYPTSFSFHKP 158          
BLAST of mRNA_C-linearis_contig7.14611.1 vs. uniprot
Match: A0A8J4UMN2_CLAMG (Zinc finger protein (Fragment) n=1 Tax=Clarias magur TaxID=1594786 RepID=A0A8J4UMN2_CLAMG)

HSP 1 Score: 125 bits (315), Expect = 7.010e-30
Identity = 68/166 (40.96%), Postives = 91/166 (54.82%), Query Frame = 0
Query:    8 DETPTNLGGLYLGPVRRPLNADSEFFDAGNINRALLCKINVFAIISGGGDAMDFDDQQ-----QTYECMFHGCSSTFPSLRRHEAHYETSHRNRCSTCGRSFPTHRLLDLHLSETHDSFFKAMAERRPMYACLVEGCTEVFQTSGKRHKHLVDSHRYPESFDFSRP 168
            D    N+      P R  L+ D EFF  G+++R L  +  V A          F D+        ++C   GC   F +L  +E HY + HR+ CS+C RSFP++RLLD+H+ E HDS F+ MAER  MY CLVEGC   FQTS +R +HL+  H YP  F F +P
Sbjct:   47 DGVEENISAFKFTPQRIRLDRDDEFFADGDVHRHLYLQDLVTA----------FTDESPLLNISEFQCHIAGCKQLFDTLEGYEHHYNSLHRHVCSSCKRSFPSNRLLDIHILEWHDSLFQVMAERECMYQCLVEGCGLKFQTSKERKEHLITIHSYPSDFRFDKP 202          
BLAST of mRNA_C-linearis_contig7.14611.1 vs. uniprot
Match: A0A2J6MB23_LACSA (Uncharacterized protein n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6MB23_LACSA)

HSP 1 Score: 125 bits (313), Expect = 1.040e-29
Identity = 65/158 (41.14%), Postives = 90/158 (56.96%), Query Frame = 0
Query:   18 YLGPVRRPLNADSEFFDAGNINRALLCK-INVFAIISGGGDAMDFDDQQQTYECMFHGCSSTFPSLRRHEAHYETSHRNRCSTCGRSFPTHRLLDLHLSETHDSFFKAMAERR-PMYACLVEGCTEVFQTSGKRHKHLVDSHRYPESFDFSRPSYSRK 173
            Y  PV R    D  FF +GNI R LL K I +        +  +F+D+ +   C   GC +T  +L   E HY   H + CS C R +PT RLL +H+SE HDSFF+A A R  PMY CLVEGC    ++   RH+HL+D H++P +++F + S+  K
Sbjct:   19 YWFPVLRRFGPDDPFFASGNIERELLAKQITLDLTEEEKQEIRNFEDKYREVLCPIVGCGATLKTLTEFEDHYNARHTSSCSVCSRVYPTSRLLSIHVSEAHDSFFQAKAARGYPMYECLVEGCGVKLKSYKSRHQHLMDKHKFPSTYEFLKKSHPSK 176          
BLAST of mRNA_C-linearis_contig7.14611.1 vs. uniprot
Match: UPI0019976E9F (zinc finger protein 511 n=1 Tax=Silurus meridionalis TaxID=175797 RepID=UPI0019976E9F)

HSP 1 Score: 125 bits (314), Expect = 1.590e-29
Identity = 65/156 (41.67%), Postives = 93/156 (59.62%), Query Frame = 0
Query:   13 NLGGLYLGPVRRPLNADSEFFDAGNINRALLCKINVFAIISGGGDAMDFDDQQQTYECMFHGCSSTFPSLRRHEAHYETSHRNRCSTCGRSFPTHRLLDLHLSETHDSFFKAMAERRPMYACLVEGCTEVFQTSGKRHKHLVDSHRYPESFDFSRP 168
            N       P R  L+ D EFF  G+++R L  + ++    + G  A++  +    ++C   GC   F +L  +E HY + HR+ CS+C RSFP++RLLD+H+ E HDS F+ MAER  MY CLVEGC   FQTS +R +HL+ +H YP  F F +P
Sbjct:   48 NSSPFTFTPQRFRLDKDDEFFADGDVHRHLYLQ-DLVTPHTEGPPALNISE----FQCHVAGCKQLFDTLETYEHHYNSLHRHVCSSCKRSFPSNRLLDIHILEWHDSLFQVMAERECMYQCLVEGCGLKFQTSKERKEHLITTHSYPADFRFDKP 198          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14611.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1Z1_ECTSI6.190e-8375.00C2H2 and CCCH zinc finger protein n=1 Tax=Ectocarp... [more]
A0A836CFJ7_9STRA1.780e-3935.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI000854ABAA3.830e-3342.07zinc finger protein 511 n=1 Tax=Nanorana parkeri T... [more]
UPI00053C12913.330e-3140.12zinc finger protein 511 n=1 Tax=Tarenaya hassleria... [more]
A0A2R6X298_MARPO1.400e-3041.44Uncharacterized protein n=1 Tax=Marchantia polymor... [more]
UPI001AAD13605.640e-3043.75zinc finger protein 511 isoform X1 n=2 Tax=Rana te... [more]
A0A8K1CJW5_PYTOL5.780e-3038.82Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A8J4UMN2_CLAMG7.010e-3040.96Zinc finger protein (Fragment) n=1 Tax=Clarias mag... [more]
A0A2J6MB23_LACSA1.040e-2941.14Uncharacterized protein n=3 Tax=Lactuca TaxID=4235... [more]
UPI0019976E9F1.590e-2941.67zinc finger protein 511 n=1 Tax=Silurus meridional... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 68..93
e-value: 1.4
score: 18.0
coord: 95..118
e-value: 0.1
score: 21.7
coord: 132..157
e-value: 1.7
score: 17.6
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 97..118
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 134..157
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 95..118
score: 9.058
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 271..296
e-value: 0.0013
score: 28.0
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 269..297
score: 13.507
IPR039258Zinc finger protein 511PANTHERPTHR21354UNCHARACTERIZEDcoord: 21..201
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 269..298

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:3738460..3740748 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14611.1mRNA_C-linearis_contig7.14611.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 3738211..3741017 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14611.1 ID=prot_C-linearis_contig7.14611.1|Name=mRNA_C-linearis_contig7.14611.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=410bp
MGDMEDDDETPTNLGGLYLGPVRRPLNADSEFFDAGNINRALLCKINVFA
IISGGGDAMDFDDQQQTYECMFHGCSSTFPSLRRHEAHYETSHRNRCSTC
GRSFPTHRLLDLHLSETHDSFFKAMAERRPMYACLVEGCTEVFQTSGKRH
KHLVDSHRYPESFDFSRPSYSRKETSTTKPKGENKTLKAAGTRSKSKSFT
KAAGCGVKSDSRPASATTTEAAAIADATAAPSGAAFQNLVPSPTNRRPRQ
QEVIDARPQPVPPSLGAVAAKPRACKFWRTGAGCRAGSSCKFRHNETQTD
DDGGGGDDTVDDRQGGASAAEARVAASVGTGGAVVCGAGERWRPGSGGTS
GAGAGSSGFGVNSGFVGAALGEGIEEDGGVDELISGMSKLMVPRRVRVGN
SARRDDPIG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR000571Znf_CCCH
IPR039258ZNF511
IPR036855Znf_CCCH_sf