prot_C-linearis_contig7.14610.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14610.1
Unique Nameprot_C-linearis_contig7.14610.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length347
Homology
BLAST of mRNA_C-linearis_contig7.14610.1 vs. uniprot
Match: A0A7S1G652_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G652_9STRA)

HSP 1 Score: 126 bits (316), Expect = 5.480e-30
Identity = 86/301 (28.57%), Postives = 133/301 (44.19%), Query Frame = 0
Query:   45 MKQVKLHPSGCQQWSSQTVAAGGTYMAYASTLTTYVYDARDFSLVTILGGNDCNVHSLLWHPTNSHRVLVFSNNGRGSEWDVRSEKRVADFDVGAPPACSAWDPVNPANLAVVSRGANETHLMRNEDSGRGGFCRGYTRRSSDQSLRATCTKWSQYEYGTLVTGWTDGRVSFSEASASSGNGGGK---GGKTKLVFPAEECGSVVDLSRHDPNGGPYVLVGYSSGTVVLWDAAGHCSIATFDRCIVGLAGIRWMAWAPGNFLALSSKSGVAKMFNISQKHPIGTVKLGETGSGVRDMAWLP 342
            MKQ KL PSGCQ W +  + AGG   AY STL  YVYD   F+L  +L G+D  +  L W+P+        S + +   W+  + +RV    +   P    W+P     +A         HL   +D+         T +++ +  +    +W+    G +  G  DG +S  +  A S +   +   GGK   V        VVDL                      WD      I  FDR   GL  I W+ WAPGNF  +++++GV +++N+SQ+HP+  V+     SG + + ++P
Sbjct:    1 MKQFKLVPSGCQGWHAGVLGAGGGRYAYCSTLAIYVYDCATFTLQKLLTGHDRTITGLSWNPSEPLLFATCSLDAKAIVWNASTGERVKTRALEVLPHGLDWNPHLATEIAWYDESGG-VHLWHVDDN----KTVRVTEKAAREGHKIKVMRWNVRRPGVIACGHADGSLSLVQPEARSSSDRLQRVPGGKEHTV-------PVVDLXXXXXXXXXXXXX-XXXXXXXXWDMESQVEINVFDRQGAGLRSIGWLEWAPGNFATVNNRTGVIRVWNVSQRHPLELVRAAR--SGFQSVTFMP 286          
BLAST of mRNA_C-linearis_contig7.14610.1 vs. uniprot
Match: A0A7S1G4J0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4J0_9STRA)

HSP 1 Score: 126 bits (316), Expect = 2.140e-28
Identity = 86/301 (28.57%), Postives = 133/301 (44.19%), Query Frame = 0
Query:   45 MKQVKLHPSGCQQWSSQTVAAGGTYMAYASTLTTYVYDARDFSLVTILGGNDCNVHSLLWHPTNSHRVLVFSNNGRGSEWDVRSEKRVADFDVGAPPACSAWDPVNPANLAVVSRGANETHLMRNEDSGRGGFCRGYTRRSSDQSLRATCTKWSQYEYGTLVTGWTDGRVSFSEASASSGNGGGK---GGKTKLVFPAEECGSVVDLSRHDPNGGPYVLVGYSSGTVVLWDAAGHCSIATFDRCIVGLAGIRWMAWAPGNFLALSSKSGVAKMFNISQKHPIGTVKLGETGSGVRDMAWLP 342
            MKQ KL PSGCQ W +  + AGG   AY STL  YVYD   F+L  +L G+D  +  L W+P+        S + +   W+  + +RV    +   P    W+P     +A         HL   +D+         T +++ +  +    +W+    G +  G  DG +S  +  A S +   +   GGK   V        VVDL                      WD      I  FDR   GL  I W+ WAPGNF  +++++GV +++N+SQ+HP+  V+     SG + + ++P
Sbjct:    1 MKQFKLVPSGCQGWHAGVLGAGGGRYAYCSTLAIYVYDCATFTLQKLLTGHDRTITGLSWNPSEPLLFATCSLDAKAIVWNASTGERVKTRALEVLPHGLDWNPHLATEIAWYDESGG-VHLWHVDDN----KTVRVTEKAAREGHKIKVMRWNVRRPGVIACGHADGSLSLVQPEARSSSDRLQRVPGGKEHTV-------PVVDLXXXXXXXXXXXXX-XXXXXXXXWDMESQVEINVFDRQGAGLRSIGWLEWAPGNFATVNNRTGVIRVWNVSQRHPLELVRAAR--SGFQSVTFMP 286          
BLAST of mRNA_C-linearis_contig7.14610.1 vs. uniprot
Match: A0A1R2BH98_9CILI (ANAPC4_WD40 domain-containing protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BH98_9CILI)

HSP 1 Score: 110 bits (275), Expect = 7.600e-23
Identity = 69/288 (23.96%), Postives = 126/288 (43.75%), Query Frame = 0
Query:   45 MKQVKLHPSGCQQWSSQTVAAGGTYMAYASTLTTYVYDARDFSLVTILGGNDCNVHSLLWHPTNSHRVLVFSNNGRGSEWDVRSEKRVADFDVGAPPACSAWDPVNPANLAVVSRGANETHLMRNEDSGRGGFCRGYTRRSSDQSLRATCTKWSQYEYGTLVTGWTDGRVSFSEASASSGNGGGKGGKTKLVFPAEECGSVVDLSRHDPNGGPYVLVGYSSGTVVLWDAAGHCSIATFDRCIVGLAGIRWMAWAPGNFLALSSKSGVAKMFNISQKHPIGTVKLGETG 332
            +KQ+KL PSGCQ W+   +A  G  +AY STL  Y  D   F++  I+  +D  +  + W+  N  ++   S +     W++ ++      ++ +P     ++P     L  +    +   L            +  T++++   +R    K+     G    G  +G       +  +          KL  P +   S  D+ + DP    Y+LV +  G++ L+D      +  FD+   G+  + W   +PG F  ++ K    KM+N+S+K+P+ TVKLG +G
Sbjct:    2 LKQIKLCPSGCQYWNKSVIARSGKLLAYCSTLAIYFLDLDTFTIAKIIAAHDQTITCITWNQLNPAQLASVSMDNMFYVWNLATDIPDVHLNIASPVLMMEFNPSKADELLFLHENGDIKILNT--------VTKAITKKANYAGIRPKTLKFHPSFTGRFALGCNEGGALVCAMAHDN--------VKKLDLPKQNTSSE-DI-QWDPLSDKYLLVAFKDGSLALFDVETKEILMAFDKISTGIKSMAWNKSSPGEFFTVTDKIAALKMWNVSKKNPVDTVKLGNSG 271          
BLAST of mRNA_C-linearis_contig7.14610.1 vs. uniprot
Match: A0A1R2CK69_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CK69_9CILI)

HSP 1 Score: 110 bits (274), Expect = 1.030e-22
Identity = 70/288 (24.31%), Postives = 128/288 (44.44%), Query Frame = 0
Query:   45 MKQVKLHPSGCQQWSSQTVAAGGTYMAYASTLTTYVYDARDFSLVTILGGNDCNVHSLLWHPTNSHRVLVFSNNGRGSEWDVRSEKRVADFDVGAPPACSAWDPVNPANLAVVSRGANETHLMRNEDSGRGGFCRGYTRRSSDQSLRATCTKWSQYEYGTLVTGWTDGRVSFSEASASSGNGGGKGGKTKLVFPAEECGSVVDLSRHDPNGGPYVLVGYSSGTVVLWDAAGHCSIATFDRCIVGLAGIRWMAWAPGNFLALSSKSGVAKMFNISQKHPIGTVKLGETG 332
            +KQ+KL PSGCQ W+   VA  G  +AY STL  Y  D   F++  I+  +D  +  + W+  N  ++   S +     W++ ++      ++ +P     ++P     L  +    +   L     +         T++++   +R    K+     G    G  +G     + S ++          K +  A++     D+ + DP    Y+LV +  G +VL+D      +  FD+   G+  I W   +PG F  ++ K    K++N+S+K+P+ TVKLG +G
Sbjct:    2 LKQIKLCPSGCQYWNKSVVARNGKLLAYCSTLAIYFLDLDTFTISKIIAAHDQTITCITWNQQNPSQLASVSMDNILYVWNLTTDTPDVHLNITSPVLMMEFNPSKIDELLFLHENGDIKTLNTQTKA--------ITKKANYAGVRPKILKFHPSINGRFALGCNEGGALVCDMSHNN---------VKKLDLAKQNTPSEDI-QWDPLSDKYLLVAFKDGNLVLFDVESTQVLMAFDQISTGIKSIAWNKSSPGEFFTVTDKIAALKVWNVSKKNPVDTVKLGNSG 271          
BLAST of mRNA_C-linearis_contig7.14610.1 vs. uniprot
Match: A0A1V9YNQ2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNQ2_9STRA)

HSP 1 Score: 105 bits (262), Expect = 3.720e-21
Identity = 84/315 (26.67%), Postives = 138/315 (43.81%), Query Frame = 0
Query:   37 ATPLPKPYMKQVKLHPSGCQQW---SSQTVAAG---GTYMAYASTLTTYVYDARDFSLVTILGGNDCNVHSLLWHPTNSHR--VLVFSNNGRGSEWDVRSEKRVADFDVGAP--PACSAWDPVN-PANLAVVSRGANETHLMRNEDSGRGGFCRGYTRRSSDQSLRATCTKWSQYEYGTLVTGWTDGRVSFSEASASSGNGGGKGGKTKLVFPAEE------CGSVVDLSRHDPNGGPYVLVGYSSGTVVLWDA--AGHCSIATFDRCIVGLAGIRWMAWAPGNFLALSSKSGVAKMFNISQKHPIGTVKLGETG 332
            A P  +  ++Q+++ PSGC Q     +  +  G   G Y A+ STL  YVYDA DF L  +L   D N+  + W P   H   +   + +GR   WDV +E+   +  + +P  P    W+P+  PA    V+   ++ HL   +             + +D  +  T  +W+    G L  G   G +     +           K  L+   E+         + D+ + D     Y+LV Y  G   LW+   A    + TFD+   G   I W+ WAPG F+  +++SG+ K++N+SQ  PI  +++   G
Sbjct:    4 ADPRAQVALQQLRVVPSGCMQRRGAGNLHIVGGDATGAYFAFCSTLAVYVYDASDFRLYRLLSTKD-NLLGMAWFPQPRHAKYLAAVALDGRLVLWDVGTEEIAFEARLPSPSAPVAFQWNPLETPAIQLAVACTDHQVHLWTIDLETSAQSISKLLSKPTDSPM--TVLRWNPQLRGMLAIGCESGAIGLHVLNR----------KALLLITREKKAGPKKAQGITDM-QWDSLSNLYLLVAYRDGHSALWEVTEASGAQLHTFDKQGAGTNAIAWLPWAPGQFVTTNARSGILKVWNVSQPTPIEHLRVRSAG 304          
BLAST of mRNA_C-linearis_contig7.14610.1 vs. uniprot
Match: A0A0G4FH37_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FH37_VITBC)

HSP 1 Score: 97.4 bits (241), Expect = 1.990e-18
Identity = 83/318 (26.10%), Postives = 139/318 (43.71%), Query Frame = 0
Query:   45 MKQVKLHPSGCQQWSSQTVAAG--GTYMAYASTLTTYVYDARDFSLVTILGGNDCNVHSLLWHPTNSHRVLVFSNNGRGSEWDVRSEK-RVA-DFDVGAPPACSA----------------------WDPVNPANLAVVSRGANETHLMRNEDSGRGGFCRGYTRRSSDQSLRATCTKWSQYEYGTLVTGWTDGRVSFSEASASSGNGGGKGGKTKLVF--PAEECGSVVDLSRHDPNGGPYVLVGYSSGTVVLWDAAGHCSIAT--FDRCIVGLAGIRWMAWAPGNFLALSSKSGVAKMFNISQKHPIGTVKLGETG 332
            M+Q++L PSG Q W+   +A    G + AYASTL  ++Y   DF L  ++ G++  + +L W P +S  +     +GR + W + SEK RV+     G+PP                          +    P+     S G+ ++  + +  +    F + Y   ++  SLR    +W       L+ G+TDG V     S          G+       P       V+  + DP    Y LV Y  G + L D      +++  FDR  VG+  I W+   PGNFL ++ K+G+ +++N SQ+ P+  +++   G
Sbjct:    1 MRQIRLVPSGIQLWNPAVLAVSPDGAHFAYASTLALFIYRRADFCLHKMIAGHEKTITALSWCPQDSDFIASCFTDGRIAVWHLPSEKLRVSRSAPSGSPPLLLEXXXXXXXXXXXXXXXXXXXXXDFSLTTPSGSFDASSGSAQS--LGSPTAKEATFSKLYA--AAGGSLRVM--RWHPTTPERLLLGFTDGSVVCLHPSTGRRMSIPYKGRNSPAVGKPVASDAHSVEEIQWDPLSADYFLVSYRDGHLSLMDLESQTEVSSVPFDRQPVGVHSIAWVKGQPGNFLTVTEKTGLIRLWNASQRAPLEQLRVAPAG 312          
BLAST of mRNA_C-linearis_contig7.14610.1 vs. uniprot
Match: A0A1V9Y771_9STRA (WD repeat-containing protein 17 isoform X3 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y771_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 1.140e-17
Identity = 78/315 (24.76%), Postives = 134/315 (42.54%), Query Frame = 0
Query:   46 KQVKLHPSGCQQ----WSSQTVAAGG--TYMAYASTLTTYVYDARDFSLVTILGGNDCNVHSLLWHPT--NSHRVLVFSNNGRGSEWDVRSEKRVAD--FDVGAPPACSAWDPVNPANLAVVSRGANETHLMRNEDSGRGGFCRGYTRRSSDQSLRATCTKWSQYEYGTLVTGWTDGRVSFSEASASSGNGGGKGGKTKLVFPAEECGSVVDLS----RHDPNGGPYVLVGYSSGTVVLWDAAGHCS--IATFDRCIVGLAGIRWMAWAPGNFLALSSKSGVAKMFNISQKHPIGTVKLGETGSGVRDMAWLPSQ 344
            +Q ++ PSGC       +   V A    T  ++ STL  Y+Y A    L  +L   D N+  + W P   +SH +   S  GR + W V +E+ V +       PP    W P   + L +    A++   + + D   G     +    S ++   T  +W+  + G L  G+ +G +    A            K   +   ++    +DL+    + D     Y+LV Y  G   LW+        + TFD+   G   I W+  APG F+  +++SG+ K++N+SQ  P+  +++    SG+  +A L  Q
Sbjct:    7 QQYRIVPSGCMHRRGFGNLHIVGANAKNTLFSFCSTLAVYIYQADTIRLYRLLSTKD-NLMGMAWFPLVCHSHYLAAVSMEGRLTLWHVDNEEIVFEAWLPTKKPPTSLEWSPHETSILKLAIACADKNIYVWSIDLESGSQDVKFLLNKSTEAA-ITVIRWNAQQKGMLAMGFENGSIGIHTAKE----------KNPFIITRDKKSKKMDLAITDMQWDTLSNIYLLVAYKDGHCALWEVTETSGNQLHTFDKQGSGTNAISWLPSAPGQFVTANARSGILKVWNVSQPQPLQHIRV--RSSGIHSIALLNGQ 307          
BLAST of mRNA_C-linearis_contig7.14610.1 vs. uniprot
Match: A0A5J4VWN5_9EUKA (Putative Vegetative incompatibility protein HET-E-1 n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4VWN5_9EUKA)

HSP 1 Score: 90.9 bits (224), Expect = 3.150e-16
Identity = 74/292 (25.34%), Postives = 125/292 (42.81%), Query Frame = 0
Query:   45 MKQVKLHPSGCQQWSSQTVAAGGTYMAYASTLTTYVYDARDFSLVTILGGNDCNVHSLLWHPTNSHRVLVFSNNGRGSEWDVRSEKRVADFDVGAPPACSAWDPVNPANLAVVSRGANETHLMRNEDSGRGGFCRGYTRRSSDQSLRATCTKWSQYEYGTLVTGWTDGRV--SFSEASASSGNGGGKGGKTKLVFPAEECGSVVDLSRHDPNGGPYVLVGYSSGTVVLWDAA--GHCSIATFDRCIVGLAGIRWMAWAPGNFLALSSKSGVAKMFNISQKHPIGTVKLGETG 332
            +KQV L PSG Q W+   V       AY S+L+ YVY +  + L  IL G D  + S+ W P + + + V   +     WD+  ++  +   +        W   N AN+    +      ++ N+       C  +               W+  +   L     + R+   F E + +S      G   + V+       + D+ + DP    +++V  ++G + L+D A  G   +  FDR   G+A + W+ W PG F   S KSGV K++N+SQK P  ++ +  TG
Sbjct:    2 IKQVALIPSGTQPWARYVVGNCHNNFAYCSSLSVYVYSSASYELRKILNGPDSYIMSMCWSPFSQNALAVSYKDKSFHLWDLHRQRPYSKISLDRFFVQMEW---NQANVKSQFK-----PIITNQ------LCYFFA--------------WNPAQSFCLACAGQERRIIIRFDETNTNSKLFNFSGILDERVY-------IKDM-KWDPLSSNFLIVVLNNGEMGLFDTAQEGGEEMMRFDRENTGIAAVAWIPWEPGGFATASEKSGVVKLWNVSQKQPTTSIHIHATG 257          
BLAST of mRNA_C-linearis_contig7.14610.1 vs. uniprot
Match: D7G1Z0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Z0_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 5.320e-16
Identity = 42/51 (82.35%), Postives = 46/51 (90.20%), Query Frame = 0
Query:  295 MAWAPGNFLALSSKSGVAKMFNISQKH-PIGTVKLGETGSGVRDMAWLPSQ 344
            MAWAPGNFL LSSK+ V K++NISQ H PIGTVKLGETGSGVRDMAWLP+Q
Sbjct:    1 MAWAPGNFLVLSSKTAVGKVYNISQSHTPIGTVKLGETGSGVRDMAWLPAQ 51          
BLAST of mRNA_C-linearis_contig7.14610.1 vs. uniprot
Match: A0A6H5L4N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4N2_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 1.860e-15
Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = 0
Query:  295 MAWAPGNFLALSSKSGVAKMFNISQKH-PIGTVKLGETGSGVRDMAWLPSQ 344
            MAWAPGNFL LSSK+ V K++NISQ H PIG+VKLGETGSGVRDMAWLP+Q
Sbjct:    1 MAWAPGNFLVLSSKTAVGKVYNISQSHTPIGSVKLGETGSGVRDMAWLPAQ 51          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14610.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A7S1G652_9STRA5.480e-3028.57Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S1G4J0_9STRA2.140e-2828.57Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A1R2BH98_9CILI7.600e-2323.96ANAPC4_WD40 domain-containing protein n=2 Tax=Sten... [more]
A0A1R2CK69_9CILI1.030e-2224.31Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
A0A1V9YNQ2_9STRA3.720e-2126.67Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A0G4FH37_VITBC1.990e-1826.10Uncharacterized protein n=3 Tax=Vitrella brassicaf... [more]
A0A1V9Y771_9STRA1.140e-1724.76WD repeat-containing protein 17 isoform X3 n=1 Tax... [more]
A0A5J4VWN5_9EUKA3.150e-1625.34Putative Vegetative incompatibility protein HET-E-... [more]
D7G1Z0_ECTSI5.320e-1682.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4N2_9PHAE1.860e-1580.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 179..346
e-value: 6.8E-11
score: 43.8
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 14..174
e-value: 3.2E-6
score: 28.2
NoneNo IPR availablePANTHERPTHR44464FAMILY NOT NAMEDcoord: 45..334
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 65..343

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:3734879..3737959 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14610.1mRNA_C-linearis_contig7.14610.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 3734879..3737959 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14610.1 ID=prot_C-linearis_contig7.14610.1|Name=mRNA_C-linearis_contig7.14610.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=347bp
MGRSSPRRRGPRRRGLQLERSSSPNGDHAHHQQHQYATPLPKPYMKQVKL
HPSGCQQWSSQTVAAGGTYMAYASTLTTYVYDARDFSLVTILGGNDCNVH
SLLWHPTNSHRVLVFSNNGRGSEWDVRSEKRVADFDVGAPPACSAWDPVN
PANLAVVSRGANETHLMRNEDSGRGGFCRGYTRRSSDQSLRATCTKWSQY
EYGTLVTGWTDGRVSFSEASASSGNGGGKGGKTKLVFPAEECGSVVDLSR
HDPNGGPYVLVGYSSGTVVLWDAAGHCSIATFDRCIVGLAGIRWMAWAPG
NFLALSSKSGVAKMFNISQKHPIGTVKLGETGSGVRDMAWLPSQAR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf