mRNA_C-linearis_contig7.14610.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig7.14610.1 vs. uniprot
Match: A0A7S1G652_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G652_9STRA) HSP 1 Score: 126 bits (316), Expect = 5.480e-30 Identity = 86/301 (28.57%), Postives = 133/301 (44.19%), Query Frame = 1
Query: 133 MKQVKLHPSGCQQWSSQTVAAGGTYMAYASTLTTYVYDARDFSLVTILGGNDCNVHSLLWHPTNSHRVLVFSNNGRGSEWDVRSEKRVADFDVGAPPACSAWDPVNPANLAVVSRGANETHLMRNEDSGRGGFCRGYTRRSSDQSLRATCTKWSQYEYGTLVTGWTDGRVSFSEASASSGNGGGK---GGKTKLVFPAEECGSVVDLSRHDPNGGPYVLVGYSSGTVVLWDAAGHCSIATFDRCIVGLAGIRWMAWAPGNFLALSSKSGVAKMFNISQKHPIGTVKLGETGSGVRDMAWLP 1026
MKQ KL PSGCQ W + + AGG AY STL YVYD F+L +L G+D + L W+P+ S + + W+ + +RV + P W+P +A HL +D+ T +++ + + +W+ G + G DG +S + A S + + GGK V VVDL WD I FDR GL I W+ WAPGNF +++++GV +++N+SQ+HP+ V+ SG + + ++P
Sbjct: 1 MKQFKLVPSGCQGWHAGVLGAGGGRYAYCSTLAIYVYDCATFTLQKLLTGHDRTITGLSWNPSEPLLFATCSLDAKAIVWNASTGERVKTRALEVLPHGLDWNPHLATEIAWYDESGG-VHLWHVDDN----KTVRVTEKAAREGHKIKVMRWNVRRPGVIACGHADGSLSLVQPEARSSSDRLQRVPGGKEHTV-------PVVDLXXXXXXXXXXXXX-XXXXXXXXWDMESQVEINVFDRQGAGLRSIGWLEWAPGNFATVNNRTGVIRVWNVSQRHPLELVRAAR--SGFQSVTFMP 286
BLAST of mRNA_C-linearis_contig7.14610.1 vs. uniprot
Match: A0A7S1G4J0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4J0_9STRA) HSP 1 Score: 126 bits (316), Expect = 2.140e-28 Identity = 86/301 (28.57%), Postives = 133/301 (44.19%), Query Frame = 1
Query: 133 MKQVKLHPSGCQQWSSQTVAAGGTYMAYASTLTTYVYDARDFSLVTILGGNDCNVHSLLWHPTNSHRVLVFSNNGRGSEWDVRSEKRVADFDVGAPPACSAWDPVNPANLAVVSRGANETHLMRNEDSGRGGFCRGYTRRSSDQSLRATCTKWSQYEYGTLVTGWTDGRVSFSEASASSGNGGGK---GGKTKLVFPAEECGSVVDLSRHDPNGGPYVLVGYSSGTVVLWDAAGHCSIATFDRCIVGLAGIRWMAWAPGNFLALSSKSGVAKMFNISQKHPIGTVKLGETGSGVRDMAWLP 1026
MKQ KL PSGCQ W + + AGG AY STL YVYD F+L +L G+D + L W+P+ S + + W+ + +RV + P W+P +A HL +D+ T +++ + + +W+ G + G DG +S + A S + + GGK V VVDL WD I FDR GL I W+ WAPGNF +++++GV +++N+SQ+HP+ V+ SG + + ++P
Sbjct: 1 MKQFKLVPSGCQGWHAGVLGAGGGRYAYCSTLAIYVYDCATFTLQKLLTGHDRTITGLSWNPSEPLLFATCSLDAKAIVWNASTGERVKTRALEVLPHGLDWNPHLATEIAWYDESGG-VHLWHVDDN----KTVRVTEKAAREGHKIKVMRWNVRRPGVIACGHADGSLSLVQPEARSSSDRLQRVPGGKEHTV-------PVVDLXXXXXXXXXXXXX-XXXXXXXXWDMESQVEINVFDRQGAGLRSIGWLEWAPGNFATVNNRTGVIRVWNVSQRHPLELVRAAR--SGFQSVTFMP 286
BLAST of mRNA_C-linearis_contig7.14610.1 vs. uniprot
Match: A0A1R2BH98_9CILI (ANAPC4_WD40 domain-containing protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BH98_9CILI) HSP 1 Score: 110 bits (275), Expect = 7.600e-23 Identity = 69/288 (23.96%), Postives = 126/288 (43.75%), Query Frame = 1
Query: 133 MKQVKLHPSGCQQWSSQTVAAGGTYMAYASTLTTYVYDARDFSLVTILGGNDCNVHSLLWHPTNSHRVLVFSNNGRGSEWDVRSEKRVADFDVGAPPACSAWDPVNPANLAVVSRGANETHLMRNEDSGRGGFCRGYTRRSSDQSLRATCTKWSQYEYGTLVTGWTDGRVSFSEASASSGNGGGKGGKTKLVFPAEECGSVVDLSRHDPNGGPYVLVGYSSGTVVLWDAAGHCSIATFDRCIVGLAGIRWMAWAPGNFLALSSKSGVAKMFNISQKHPIGTVKLGETG 996
+KQ+KL PSGCQ W+ +A G +AY STL Y D F++ I+ +D + + W+ N ++ S + W++ ++ ++ +P ++P L + + L + T++++ +R K+ G G +G + + KL P + S D+ + DP Y+LV + G++ L+D + FD+ G+ + W +PG F ++ K KM+N+S+K+P+ TVKLG +G
Sbjct: 2 LKQIKLCPSGCQYWNKSVIARSGKLLAYCSTLAIYFLDLDTFTIAKIIAAHDQTITCITWNQLNPAQLASVSMDNMFYVWNLATDIPDVHLNIASPVLMMEFNPSKADELLFLHENGDIKILNT--------VTKAITKKANYAGIRPKTLKFHPSFTGRFALGCNEGGALVCAMAHDN--------VKKLDLPKQNTSSE-DI-QWDPLSDKYLLVAFKDGSLALFDVETKEILMAFDKISTGIKSMAWNKSSPGEFFTVTDKIAALKMWNVSKKNPVDTVKLGNSG 271
BLAST of mRNA_C-linearis_contig7.14610.1 vs. uniprot
Match: A0A1R2CK69_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CK69_9CILI) HSP 1 Score: 110 bits (274), Expect = 1.030e-22 Identity = 70/288 (24.31%), Postives = 128/288 (44.44%), Query Frame = 1
Query: 133 MKQVKLHPSGCQQWSSQTVAAGGTYMAYASTLTTYVYDARDFSLVTILGGNDCNVHSLLWHPTNSHRVLVFSNNGRGSEWDVRSEKRVADFDVGAPPACSAWDPVNPANLAVVSRGANETHLMRNEDSGRGGFCRGYTRRSSDQSLRATCTKWSQYEYGTLVTGWTDGRVSFSEASASSGNGGGKGGKTKLVFPAEECGSVVDLSRHDPNGGPYVLVGYSSGTVVLWDAAGHCSIATFDRCIVGLAGIRWMAWAPGNFLALSSKSGVAKMFNISQKHPIGTVKLGETG 996
+KQ+KL PSGCQ W+ VA G +AY STL Y D F++ I+ +D + + W+ N ++ S + W++ ++ ++ +P ++P L + + L + T++++ +R K+ G G +G + S ++ K + A++ D+ + DP Y+LV + G +VL+D + FD+ G+ I W +PG F ++ K K++N+S+K+P+ TVKLG +G
Sbjct: 2 LKQIKLCPSGCQYWNKSVVARNGKLLAYCSTLAIYFLDLDTFTISKIIAAHDQTITCITWNQQNPSQLASVSMDNILYVWNLTTDTPDVHLNITSPVLMMEFNPSKIDELLFLHENGDIKTLNTQTKA--------ITKKANYAGVRPKILKFHPSINGRFALGCNEGGALVCDMSHNN---------VKKLDLAKQNTPSEDI-QWDPLSDKYLLVAFKDGNLVLFDVESTQVLMAFDQISTGIKSIAWNKSSPGEFFTVTDKIAALKVWNVSKKNPVDTVKLGNSG 271
BLAST of mRNA_C-linearis_contig7.14610.1 vs. uniprot
Match: A0A1V9YNQ2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YNQ2_9STRA) HSP 1 Score: 105 bits (262), Expect = 3.720e-21 Identity = 84/315 (26.67%), Postives = 138/315 (43.81%), Query Frame = 1
Query: 109 ATPLPKPYMKQVKLHPSGCQQW---SSQTVAAG---GTYMAYASTLTTYVYDARDFSLVTILGGNDCNVHSLLWHPTNSHR--VLVFSNNGRGSEWDVRSEKRVADFDVGAP--PACSAWDPVN-PANLAVVSRGANETHLMRNEDSGRGGFCRGYTRRSSDQSLRATCTKWSQYEYGTLVTGWTDGRVSFSEASASSGNGGGKGGKTKLVFPAEE------CGSVVDLSRHDPNGGPYVLVGYSSGTVVLWDA--AGHCSIATFDRCIVGLAGIRWMAWAPGNFLALSSKSGVAKMFNISQKHPIGTVKLGETG 996
A P + ++Q+++ PSGC Q + + G G Y A+ STL YVYDA DF L +L D N+ + W P H + + +GR WDV +E+ + + +P P W+P+ PA V+ ++ HL + + +D + T +W+ G L G G + + K L+ E+ + D+ + D Y+LV Y G LW+ A + TFD+ G I W+ WAPG F+ +++SG+ K++N+SQ PI +++ G
Sbjct: 4 ADPRAQVALQQLRVVPSGCMQRRGAGNLHIVGGDATGAYFAFCSTLAVYVYDASDFRLYRLLSTKD-NLLGMAWFPQPRHAKYLAAVALDGRLVLWDVGTEEIAFEARLPSPSAPVAFQWNPLETPAIQLAVACTDHQVHLWTIDLETSAQSISKLLSKPTDSPM--TVLRWNPQLRGMLAIGCESGAIGLHVLNR----------KALLLITREKKAGPKKAQGITDM-QWDSLSNLYLLVAYRDGHSALWEVTEASGAQLHTFDKQGAGTNAIAWLPWAPGQFVTTNARSGILKVWNVSQPTPIEHLRVRSAG 304
BLAST of mRNA_C-linearis_contig7.14610.1 vs. uniprot
Match: A0A0G4FH37_VITBC (Uncharacterized protein n=3 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FH37_VITBC) HSP 1 Score: 97.4 bits (241), Expect = 1.990e-18 Identity = 83/318 (26.10%), Postives = 139/318 (43.71%), Query Frame = 1
Query: 133 MKQVKLHPSGCQQWSSQTVAAG--GTYMAYASTLTTYVYDARDFSLVTILGGNDCNVHSLLWHPTNSHRVLVFSNNGRGSEWDVRSEK-RVA-DFDVGAPPACSA----------------------WDPVNPANLAVVSRGANETHLMRNEDSGRGGFCRGYTRRSSDQSLRATCTKWSQYEYGTLVTGWTDGRVSFSEASASSGNGGGKGGKTKLVF--PAEECGSVVDLSRHDPNGGPYVLVGYSSGTVVLWDAAGHCSIAT--FDRCIVGLAGIRWMAWAPGNFLALSSKSGVAKMFNISQKHPIGTVKLGETG 996
M+Q++L PSG Q W+ +A G + AYASTL ++Y DF L ++ G++ + +L W P +S + +GR + W + SEK RV+ G+PP + P+ S G+ ++ + + + F + Y ++ SLR +W L+ G+TDG V S G+ P V+ + DP Y LV Y G + L D +++ FDR VG+ I W+ PGNFL ++ K+G+ +++N SQ+ P+ +++ G
Sbjct: 1 MRQIRLVPSGIQLWNPAVLAVSPDGAHFAYASTLALFIYRRADFCLHKMIAGHEKTITALSWCPQDSDFIASCFTDGRIAVWHLPSEKLRVSRSAPSGSPPLLLEXXXXXXXXXXXXXXXXXXXXXDFSLTTPSGSFDASSGSAQS--LGSPTAKEATFSKLYA--AAGGSLRVM--RWHPTTPERLLLGFTDGSVVCLHPSTGRRMSIPYKGRNSPAVGKPVASDAHSVEEIQWDPLSADYFLVSYRDGHLSLMDLESQTEVSSVPFDRQPVGVHSIAWVKGQPGNFLTVTEKTGLIRLWNASQRAPLEQLRVAPAG 312
BLAST of mRNA_C-linearis_contig7.14610.1 vs. uniprot
Match: A0A1V9Y771_9STRA (WD repeat-containing protein 17 isoform X3 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y771_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.140e-17 Identity = 78/315 (24.76%), Postives = 134/315 (42.54%), Query Frame = 1
Query: 136 KQVKLHPSGCQQ----WSSQTVAAGG--TYMAYASTLTTYVYDARDFSLVTILGGNDCNVHSLLWHPT--NSHRVLVFSNNGRGSEWDVRSEKRVAD--FDVGAPPACSAWDPVNPANLAVVSRGANETHLMRNEDSGRGGFCRGYTRRSSDQSLRATCTKWSQYEYGTLVTGWTDGRVSFSEASASSGNGGGKGGKTKLVFPAEECGSVVDLS----RHDPNGGPYVLVGYSSGTVVLWDAAGHCS--IATFDRCIVGLAGIRWMAWAPGNFLALSSKSGVAKMFNISQKHPIGTVKLGETGSGVRDMAWLPSQ 1032
+Q ++ PSGC + V A T ++ STL Y+Y A L +L D N+ + W P +SH + S GR + W V +E+ V + PP W P + L + A++ + + D G + S ++ T +W+ + G L G+ +G + A K + ++ +DL+ + D Y+LV Y G LW+ + TFD+ G I W+ APG F+ +++SG+ K++N+SQ P+ +++ SG+ +A L Q
Sbjct: 7 QQYRIVPSGCMHRRGFGNLHIVGANAKNTLFSFCSTLAVYIYQADTIRLYRLLSTKD-NLMGMAWFPLVCHSHYLAAVSMEGRLTLWHVDNEEIVFEAWLPTKKPPTSLEWSPHETSILKLAIACADKNIYVWSIDLESGSQDVKFLLNKSTEAA-ITVIRWNAQQKGMLAMGFENGSIGIHTAKE----------KNPFIITRDKKSKKMDLAITDMQWDTLSNIYLLVAYKDGHCALWEVTETSGNQLHTFDKQGSGTNAISWLPSAPGQFVTANARSGILKVWNVSQPQPLQHIRV--RSSGIHSIALLNGQ 307
BLAST of mRNA_C-linearis_contig7.14610.1 vs. uniprot
Match: A0A5J4VWN5_9EUKA (Putative Vegetative incompatibility protein HET-E-1 n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4VWN5_9EUKA) HSP 1 Score: 90.9 bits (224), Expect = 3.150e-16 Identity = 74/292 (25.34%), Postives = 125/292 (42.81%), Query Frame = 1
Query: 133 MKQVKLHPSGCQQWSSQTVAAGGTYMAYASTLTTYVYDARDFSLVTILGGNDCNVHSLLWHPTNSHRVLVFSNNGRGSEWDVRSEKRVADFDVGAPPACSAWDPVNPANLAVVSRGANETHLMRNEDSGRGGFCRGYTRRSSDQSLRATCTKWSQYEYGTLVTGWTDGRV--SFSEASASSGNGGGKGGKTKLVFPAEECGSVVDLSRHDPNGGPYVLVGYSSGTVVLWDAA--GHCSIATFDRCIVGLAGIRWMAWAPGNFLALSSKSGVAKMFNISQKHPIGTVKLGETG 996
+KQV L PSG Q W+ V AY S+L+ YVY + + L IL G D + S+ W P + + + V + WD+ ++ + + W N AN+ + ++ N+ C + W+ + L + R+ F E + +S G + V+ + D+ + DP +++V ++G + L+D A G + FDR G+A + W+ W PG F S KSGV K++N+SQK P ++ + TG
Sbjct: 2 IKQVALIPSGTQPWARYVVGNCHNNFAYCSSLSVYVYSSASYELRKILNGPDSYIMSMCWSPFSQNALAVSYKDKSFHLWDLHRQRPYSKISLDRFFVQMEW---NQANVKSQFK-----PIITNQ------LCYFFA--------------WNPAQSFCLACAGQERRIIIRFDETNTNSKLFNFSGILDERVY-------IKDM-KWDPLSSNFLIVVLNNGEMGLFDTAQEGGEEMMRFDRENTGIAAVAWIPWEPGGFATASEKSGVVKLWNVSQKQPTTSIHIHATG 257
BLAST of mRNA_C-linearis_contig7.14610.1 vs. uniprot
Match: D7G1Z0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Z0_ECTSI) HSP 1 Score: 90.1 bits (222), Expect = 5.320e-16 Identity = 42/51 (82.35%), Postives = 46/51 (90.20%), Query Frame = 1
Query: 883 MAWAPGNFLALSSKSGVAKMFNISQKH-PIGTVKLGETGSGVRDMAWLPSQ 1032
MAWAPGNFL LSSK+ V K++NISQ H PIGTVKLGETGSGVRDMAWLP+Q
Sbjct: 1 MAWAPGNFLVLSSKTAVGKVYNISQSHTPIGTVKLGETGSGVRDMAWLPAQ 51
BLAST of mRNA_C-linearis_contig7.14610.1 vs. uniprot
Match: A0A6H5L4N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4N2_9PHAE) HSP 1 Score: 88.6 bits (218), Expect = 1.860e-15 Identity = 41/51 (80.39%), Postives = 46/51 (90.20%), Query Frame = 1
Query: 883 MAWAPGNFLALSSKSGVAKMFNISQKH-PIGTVKLGETGSGVRDMAWLPSQ 1032
MAWAPGNFL LSSK+ V K++NISQ H PIG+VKLGETGSGVRDMAWLP+Q
Sbjct: 1 MAWAPGNFLVLSSKTAVGKVYNISQSHTPIGSVKLGETGSGVRDMAWLPAQ 51 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14610.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig7.14610.1 >prot_C-linearis_contig7.14610.1 ID=prot_C-linearis_contig7.14610.1|Name=mRNA_C-linearis_contig7.14610.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=347bp MGRSSPRRRGPRRRGLQLERSSSPNGDHAHHQQHQYATPLPKPYMKQVKLback to top mRNA from alignment at C-linearis_contig7:3734879..3737959- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig7.14610.1 ID=mRNA_C-linearis_contig7.14610.1|Name=mRNA_C-linearis_contig7.14610.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=3081bp|location=Sequence derived from alignment at C-linearis_contig7:3734879..3737959- (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig7:3734879..3737959- >mRNA_C-linearis_contig7.14610.1 ID=mRNA_C-linearis_contig7.14610.1|Name=mRNA_C-linearis_contig7.14610.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=2082bp|location=Sequence derived from alignment at C-linearis_contig7:3734879..3737959- (Chordaria linearis ClinC8C monoicous)back to top |