prot_C-linearis_contig7.14583.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14583.1
Unique Nameprot_C-linearis_contig7.14583.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length186
Homology
BLAST of mRNA_C-linearis_contig7.14583.1 vs. uniprot
Match: A0A6H5L438_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L438_9PHAE)

HSP 1 Score: 280 bits (716), Expect = 4.620e-94
Identity = 150/181 (82.87%), Postives = 166/181 (91.71%), Query Frame = 0
Query:    1 MRCAAVAVVIGCAVCAQAFVPTTSPRLSTSSRASAVRASRRHVRMSAASSELPTQAQRQQALYDMVYVERLPEEQQMASGLFLPSKENPRMHVCKVISVGSGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICAVVPDSKDFEAAAREAGKMQEEMDKAAGSG 181
            M+CAA A+V+G AVCAQAF+P + P   TSS+AS VRASR  VRMSAA+ ELPTQA+RQ+ALYDMVYVERLPEEQQM SGLFLP+K NPRMHVCKV+SVG+GREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICAV+P+S+DFE AAREAGK+Q EMDKAAGSG
Sbjct:    1 MKCAA-ALVVGGAVCAQAFLPASLPCHLTSSKASDVRASRTSVRMSAAA-ELPTQAKRQKALYDMVYVERLPEEQQMTSGLFLPAKANPRMHVCKVVSVGNGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICAVIPNSQDFEDAAREAGKLQAEMDKAAGSG 179          
BLAST of mRNA_C-linearis_contig7.14583.1 vs. uniprot
Match: D7FXF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXF3_ECTSI)

HSP 1 Score: 237 bits (605), Expect = 8.670e-78
Identity = 116/134 (86.57%), Postives = 129/134 (96.27%), Query Frame = 0
Query:   48 ASSELPTQAQRQQALYDMVYVERLPEEQQMASGLFLPSKENPRMHVCKVISVGSGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICAVVPDSKDFEAAAREAGKMQEEMDKAAGSG 181
            A++ELPTQAQRQ+ALYDMVYVERLPEEQQM SGLFLP+K NPRMHVCKV+S+G+GREGESG+VTPNDAVK GDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICAV+P+S+DFE AAREAGK+Q E+DKAAGSG
Sbjct:    3 AAAELPTQAQRQKALYDMVYVERLPEEQQMTSGLFLPAKANPRMHVCKVVSIGNGREGESGNVTPNDAVKQGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICAVIPNSEDFENAAREAGKLQAEIDKAAGSG 136          
BLAST of mRNA_C-linearis_contig7.14583.1 vs. uniprot
Match: A0A835ZNU0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZNU0_9STRA)

HSP 1 Score: 182 bits (462), Expect = 4.480e-56
Identity = 89/130 (68.46%), Postives = 107/130 (82.31%), Query Frame = 0
Query:   51 ELPTQAQRQQALYDMVYVERLPEEQQMASGLFLPSKENPRMHVCKVISVGSGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICAVVPDSKDFEAAAREAGKMQEEMDKAAGS 180
            ELP++A RQQALYDMVYVERLPE QQM SGLFLP KENPRMHVCK++S+G GREGESG +  N  +KPGDLV+VKDP+GIGP+DDEF+  KFSFVRY +ICAV+P+S  +EA+AR AG+    M +A  S
Sbjct:    4 ELPSKAVRQQALYDMVYVERLPEAQQMTSGLFLPGKENPRMHVCKIVSLGQGREGESGTLVENAGLKPGDLVYVKDPWGIGPKDDEFSNHKFSFVRYQNICAVIPNSDAYEASARAAGEEALAMAQAGQS 133          
BLAST of mRNA_C-linearis_contig7.14583.1 vs. uniprot
Match: A0A6T5R4I0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5R4I0_HETAK)

HSP 1 Score: 128 bits (322), Expect = 3.210e-34
Identity = 75/161 (46.58%), Postives = 104/161 (64.60%), Query Frame = 0
Query:   18 AFVPT-TSPRLSTSSRASAVRASRRHVRMSAASSELPTQAQRQQALYDMVYVERLPEEQQMASGLFLPSKENPRMHVCKVISVGSGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICAVVPDSKDFEA---AAREAGKMQEEM 174
            A VP   S  LST  +   V+AS   ++MS+   ELP +A +Q+ LY MVYVERLPE  Q   GLFLP +ENPR H+C+V+SVG G EGESG V  +  + PGD V+VK+P+GIG +D++F  +KFSF+RY  +C         EA     ++A +++EE+
Sbjct:   10 ALVPILASAFLSTPGKNGIVKASA--LKMSSYLEELPQEA-KQECLYGMVYVERLPEPVQTTGGLFLPGQENPRRHICRVVSVGPGVEGESGAVATSRGLAPGDYVYVKNPWGIGAKDEQFGRRKFSFLRYNEVCGTFDAGAAMEAEISGLKKAEELEEEL 167          
BLAST of mRNA_C-linearis_contig7.14583.1 vs. uniprot
Match: A0A7R9U985_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U985_9STRA)

HSP 1 Score: 117 bits (294), Expect = 3.620e-30
Identity = 61/115 (53.04%), Postives = 81/115 (70.43%), Query Frame = 0
Query:   40 RRHVRMSAASSELPTQAQRQQALYDMVYVERLPEEQQMASGLFLP--SKENPRMHVCKVISVGSGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICA 152
            RR + +      +P +A +Q ALYDMVYVERL E+QQ A G+FLP  S  N  +H+ +V+SVG GREGE+G  T N   K GD+VF+++ +GIGPRD+EF G+KFSFVR   +CA
Sbjct:   54 RRPMELRVTDEPVPEEASKQIALYDMVYVERLGEDQQSAGGVFLPKVSGGNQDLHMARVVSVGDGREGENGCKTMNGNYKQGDIVFLRNAWGIGPRDEEFFGRKFSFVREQDVCA 168          
BLAST of mRNA_C-linearis_contig7.14583.1 vs. uniprot
Match: A0A7S1UEZ3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UEZ3_9STRA)

HSP 1 Score: 115 bits (287), Expect = 6.440e-29
Identity = 57/103 (55.34%), Postives = 76/103 (73.79%), Query Frame = 0
Query:   52 LPTQAQRQQALYDMVYVERLPEEQQMASGLFLP--SKENPRMHVCKVISVGSGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICA 152
            +P +A  Q ALYDM+YVERL E+ Q A G+FLP  S  N  +H+ +V+SVG GREGE+G  T N + K GD+VF+++ +GIGPRD+EF G+KFSFVR   +CA
Sbjct:   84 VPEEAAVQNALYDMIYVERLGEDTQSAGGVFLPTMSGSNQDLHMARVLSVGDGREGENGLRTMNGSYKEGDIVFLRNAWGIGPRDEEFRGRKFSFVREQDVCA 186          
BLAST of mRNA_C-linearis_contig7.14583.1 vs. uniprot
Match: A0A7S1XW59_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XW59_9STRA)

HSP 1 Score: 115 bits (287), Expect = 1.080e-28
Identity = 57/103 (55.34%), Postives = 76/103 (73.79%), Query Frame = 0
Query:   52 LPTQAQRQQALYDMVYVERLPEEQQMASGLFLP--SKENPRMHVCKVISVGSGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICA 152
            +P +A  Q ALYDM+YVERL E+ Q A G+FLP  S  N  +H+ +V+SVG GREGE+G  T N + K GD+VF+++ +GIGPRD+EF G+KFSFVR   +CA
Sbjct:  104 VPEEAAVQNALYDMIYVERLGEDTQSAGGVFLPTMSGSNQDLHMARVLSVGDGREGENGLRTMNGSYKEGDIVFLRNAWGIGPRDEEFRGRKFSFVREQDVCA 206          
BLAST of mRNA_C-linearis_contig7.14583.1 vs. uniprot
Match: A0A8J2SZF1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZF1_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.440e-28
Identity = 56/101 (55.45%), Postives = 73/101 (72.28%), Query Frame = 0
Query:   58 RQQALYDMVYVERLPEEQQMASGLFLPSKENPRMHVCKVISVGSGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAG----KKFSFVRYTSICAVV 154
            RQQALYD+VYVER+   +  A GLFL + E+P MH+ KV+SVG+G +G SG V  N  +KPGDLV+ K P+GIGP+D+EF      ++FSF+RYT I  VV
Sbjct:   42 RQQALYDLVYVERIKPPETSAGGLFLVAPEDPPMHLAKVVSVGAGGQGNSGLVVENAGLKPGDLVYCKHPWGIGPKDEEFGEDGQERRFSFLRYTDIAGVV 142          
BLAST of mRNA_C-linearis_contig7.14583.1 vs. uniprot
Match: A0A7S1UZ75_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZ75_9STRA)

HSP 1 Score: 102 bits (253), Expect = 3.870e-24
Identity = 48/100 (48.00%), Postives = 69/100 (69.00%), Query Frame = 0
Query:   63 YDMVYVERLPEEQQMASGLFLPSKENPRMHVCKVISVGSGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFA-GKKFSFVRYTSICAVVPDSKDFE 161
            YDMV  ER+  + +  SGLF+P ++ P++H+CKV+S+G GRE E+G + P   +K GD+V  K+P+GIGP+D+E A GKK SF+R   I AV+P     E
Sbjct:   61 YDMVLCERIQGKPKTESGLFVPQEDLPKLHICKVLSMGPGREEENGMIAPMPDIKVGDIVVAKNPWGIGPKDEETADGKKLSFMRALDIAAVIPGGMKIE 160          
BLAST of mRNA_C-linearis_contig7.14583.1 vs. uniprot
Match: B7FX98_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FX98_PHATC)

HSP 1 Score: 101 bits (252), Expect = 4.410e-24
Identity = 50/96 (52.08%), Postives = 69/96 (71.88%), Query Frame = 0
Query:   60 QALYDMVYVERLPEEQQMASGLFLPSKENPRMHVCKVISVGSGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFA-GKKFSFVRYTSICAVV 154
            Q  YDMV VER+  +    SGLF+P ++ P++H+CKV+SVG GRE E+G V+P   ++ GD+V  K+P+GIGP+D+E A GKK SF+R   I AVV
Sbjct:   52 QCHYDMVLVERVQGKPPTESGLFVPQEDLPKLHLCKVLSVGPGREEENGRVSPMPEIRVGDIVIAKNPWGIGPKDEETADGKKLSFMRSQDIAAVV 147          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14583.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L438_9PHAE4.620e-9482.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXF3_ECTSI8.670e-7886.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZNU0_9STRA4.480e-5668.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6T5R4I0_HETAK3.210e-3446.58Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7R9U985_9STRA3.620e-3053.04Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1UEZ3_9STRA6.440e-2955.34Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1XW59_9STRA1.080e-2855.34Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A8J2SZF1_9STRA1.440e-2855.45Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1UZ75_9STRA3.870e-2448.00Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
B7FX98_PHATC4.410e-2452.08Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020818GroES chaperonin familyPRINTSPR00297CHAPERONIN10coord: 81..102
score: 26.75
coord: 141..154
score: 18.6
coord: 59..74
score: 33.53
coord: 117..129
score: 36.78
IPR020818GroES chaperonin familySMARTSM00883Cpn10_2coord: 58..154
e-value: 4.0E-5
score: 21.5
IPR020818GroES chaperonin familyPFAMPF00166Cpn10coord: 60..154
e-value: 7.5E-13
score: 48.4
IPR037124GroES chaperonin superfamilyGENE3D2.30.33.40coord: 59..155
e-value: 7.7E-15
score: 56.7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..18
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..185
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.668
IPR011032GroES-like superfamilySUPERFAMILY50129GroES-likecoord: 61..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:3515098..3525326 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14583.1mRNA_C-linearis_contig7.14583.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 3514219..3525894 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14583.1 ID=prot_C-linearis_contig7.14583.1|Name=mRNA_C-linearis_contig7.14583.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=186bp
MRCAAVAVVIGCAVCAQAFVPTTSPRLSTSSRASAVRASRRHVRMSAASS
ELPTQAQRQQALYDMVYVERLPEEQQMASGLFLPSKENPRMHVCKVISVG
SGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSI
CAVVPDSKDFEAAAREAGKMQEEMDKAAGSGGPVF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020818Chaperonin_GroES
IPR037124Chaperonin_GroES_sf
IPR011032GroES-like_sf