mRNA_C-linearis_contig7.14583.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig7.14583.1
Unique NamemRNA_C-linearis_contig7.14583.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
BLAST of mRNA_C-linearis_contig7.14583.1 vs. uniprot
Match: A0A6H5L438_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L438_9PHAE)

HSP 1 Score: 281 bits (719), Expect = 8.920e-90
Identity = 150/181 (82.87%), Postives = 166/181 (91.71%), Query Frame = 1
Query:   73 MRCAAVAVVIGCAVCAQAFVPTTSPRLSTSSRASAVRASRRHVRMSAASSELPTQAQRQQALYDMVYVERLPEEQQMASGLFLPSKENPRMHVCKVISVGSGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICAVVPDSKDFEAAAREAGKMQEEMDKAAGSG 615
            M+CAA A+V+G AVCAQAF+P + P   TSS+AS VRASR  VRMSAA+ ELPTQA+RQ+ALYDMVYVERLPEEQQM SGLFLP+K NPRMHVCKV+SVG+GREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICAV+P+S+DFE AAREAGK+Q EMDKAAGSG
Sbjct:    1 MKCAA-ALVVGGAVCAQAFLPASLPCHLTSSKASDVRASRTSVRMSAAA-ELPTQAKRQKALYDMVYVERLPEEQQMTSGLFLPAKANPRMHVCKVVSVGNGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICAVIPNSQDFEDAAREAGKLQAEMDKAAGSG 179          
BLAST of mRNA_C-linearis_contig7.14583.1 vs. uniprot
Match: D7FXF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXF3_ECTSI)

HSP 1 Score: 239 bits (609), Expect = 6.590e-74
Identity = 116/134 (86.57%), Postives = 129/134 (96.27%), Query Frame = 1
Query:  214 ASSELPTQAQRQQALYDMVYVERLPEEQQMASGLFLPSKENPRMHVCKVISVGSGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICAVVPDSKDFEAAAREAGKMQEEMDKAAGSG 615
            A++ELPTQAQRQ+ALYDMVYVERLPEEQQM SGLFLP+K NPRMHVCKV+S+G+GREGESG+VTPNDAVK GDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICAV+P+S+DFE AAREAGK+Q E+DKAAGSG
Sbjct:    3 AAAELPTQAQRQKALYDMVYVERLPEEQQMTSGLFLPAKANPRMHVCKVVSIGNGREGESGNVTPNDAVKQGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICAVIPNSEDFENAAREAGKLQAEIDKAAGSG 136          
BLAST of mRNA_C-linearis_contig7.14583.1 vs. uniprot
Match: A0A835ZNU0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZNU0_9STRA)

HSP 1 Score: 183 bits (465), Expect = 1.510e-52
Identity = 89/130 (68.46%), Postives = 107/130 (82.31%), Query Frame = 1
Query:  223 ELPTQAQRQQALYDMVYVERLPEEQQMASGLFLPSKENPRMHVCKVISVGSGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICAVVPDSKDFEAAAREAGKMQEEMDKAAGS 612
            ELP++A RQQALYDMVYVERLPE QQM SGLFLP KENPRMHVCK++S+G GREGESG +  N  +KPGDLV+VKDP+GIGP+DDEF+  KFSFVRY +ICAV+P+S  +EA+AR AG+    M +A  S
Sbjct:    4 ELPSKAVRQQALYDMVYVERLPEAQQMTSGLFLPGKENPRMHVCKIVSLGQGREGESGTLVENAGLKPGDLVYVKDPWGIGPKDDEFSNHKFSFVRYQNICAVIPNSDAYEASARAAGEEALAMAQAGQS 133          
BLAST of mRNA_C-linearis_contig7.14583.1 vs. uniprot
Match: A0A6T5R4I0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5R4I0_HETAK)

HSP 1 Score: 130 bits (326), Expect = 1.040e-31
Identity = 76/165 (46.06%), Postives = 102/165 (61.82%), Query Frame = 1
Query:  124 AFVPT-TSPRLSTSSRASAVRASRRHVRMSAASSELPTQAQRQQALYDMVYVERLPEEQQMASGLFLPSKENPRMHVCKVISVGSGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICAVVPDSKDFEAAAREAGKMQEEMDKAAGSG 615
            A VP   S  LST  +   V+AS   ++MS+   ELP +A +Q+ LY MVYVERLPE  Q   GLFLP +ENPR H+C+V+SVG G EGESG V  +  + PGD V+VK+P+GIG +D++F  +KFSF+RY  +C         EA      K +E  ++  G G
Sbjct:   10 ALVPILASAFLSTPGKNGIVKASA--LKMSSYLEELPQEA-KQECLYGMVYVERLPEPVQTTGGLFLPGQENPRRHICRVVSVGPGVEGESGAVATSRGLAPGDYVYVKNPWGIGAKDEQFGRRKFSFLRYNEVCGTFDAGAAMEAEISGLKKAEELEEELGGIG 171          
BLAST of mRNA_C-linearis_contig7.14583.1 vs. uniprot
Match: A0A7R9U985_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U985_9STRA)

HSP 1 Score: 117 bits (294), Expect = 2.370e-27
Identity = 61/115 (53.04%), Postives = 81/115 (70.43%), Query Frame = 1
Query:  190 RRHVRMSAASSELPTQAQRQQALYDMVYVERLPEEQQMASGLFLP--SKENPRMHVCKVISVGSGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICA 528
            RR + +      +P +A +Q ALYDMVYVERL E+QQ A G+FLP  S  N  +H+ +V+SVG GREGE+G  T N   K GD+VF+++ +GIGPRD+EF G+KFSFVR   +CA
Sbjct:   54 RRPMELRVTDEPVPEEASKQIALYDMVYVERLGEDQQSAGGVFLPKVSGGNQDLHMARVVSVGDGREGENGCKTMNGNYKQGDIVFLRNAWGIGPRDEEFFGRKFSFVREQDVCA 168          
BLAST of mRNA_C-linearis_contig7.14583.1 vs. uniprot
Match: A0A7S1UEZ3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UEZ3_9STRA)

HSP 1 Score: 115 bits (287), Expect = 3.590e-26
Identity = 57/103 (55.34%), Postives = 76/103 (73.79%), Query Frame = 1
Query:  226 LPTQAQRQQALYDMVYVERLPEEQQMASGLFLP--SKENPRMHVCKVISVGSGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICA 528
            +P +A  Q ALYDM+YVERL E+ Q A G+FLP  S  N  +H+ +V+SVG GREGE+G  T N + K GD+VF+++ +GIGPRD+EF G+KFSFVR   +CA
Sbjct:   84 VPEEAAVQNALYDMIYVERLGEDTQSAGGVFLPTMSGSNQDLHMARVLSVGDGREGENGLRTMNGSYKEGDIVFLRNAWGIGPRDEEFRGRKFSFVREQDVCA 186          
BLAST of mRNA_C-linearis_contig7.14583.1 vs. uniprot
Match: A0A7S1XW59_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XW59_9STRA)

HSP 1 Score: 115 bits (287), Expect = 6.070e-26
Identity = 57/103 (55.34%), Postives = 76/103 (73.79%), Query Frame = 1
Query:  226 LPTQAQRQQALYDMVYVERLPEEQQMASGLFLP--SKENPRMHVCKVISVGSGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSICA 528
            +P +A  Q ALYDM+YVERL E+ Q A G+FLP  S  N  +H+ +V+SVG GREGE+G  T N + K GD+VF+++ +GIGPRD+EF G+KFSFVR   +CA
Sbjct:  104 VPEEAAVQNALYDMIYVERLGEDTQSAGGVFLPTMSGSNQDLHMARVLSVGDGREGENGLRTMNGSYKEGDIVFLRNAWGIGPRDEEFRGRKFSFVREQDVCA 206          
BLAST of mRNA_C-linearis_contig7.14583.1 vs. uniprot
Match: A0A8J2SZF1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZF1_9STRA)

HSP 1 Score: 112 bits (281), Expect = 6.910e-26
Identity = 56/101 (55.45%), Postives = 73/101 (72.28%), Query Frame = 1
Query:  244 RQQALYDMVYVERLPEEQQMASGLFLPSKENPRMHVCKVISVGSGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAG----KKFSFVRYTSICAVV 534
            RQQALYD+VYVER+   +  A GLFL + E+P MH+ KV+SVG+G +G SG V  N  +KPGDLV+ K P+GIGP+D+EF      ++FSF+RYT I  VV
Sbjct:   42 RQQALYDLVYVERIKPPETSAGGLFLVAPEDPPMHLAKVVSVGAGGQGNSGLVVENAGLKPGDLVYCKHPWGIGPKDEEFGEDGQERRFSFLRYTDIAGVV 142          
BLAST of mRNA_C-linearis_contig7.14583.1 vs. uniprot
Match: A0A7S1UZ75_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UZ75_9STRA)

HSP 1 Score: 102 bits (253), Expect = 9.010e-22
Identity = 48/100 (48.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query:  259 YDMVYVERLPEEQQMASGLFLPSKENPRMHVCKVISVGSGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFA-GKKFSFVRYTSICAVVPDSKDFE 555
            YDMV  ER+  + +  SGLF+P ++ P++H+CKV+S+G GRE E+G + P   +K GD+V  K+P+GIGP+D+E A GKK SF+R   I AV+P     E
Sbjct:   61 YDMVLCERIQGKPKTESGLFVPQEDLPKLHICKVLSMGPGREEENGMIAPMPDIKVGDIVVAKNPWGIGPKDEETADGKKLSFMRALDIAAVIPGGMKIE 160          
BLAST of mRNA_C-linearis_contig7.14583.1 vs. uniprot
Match: B7FX98_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FX98_PHATC)

HSP 1 Score: 101 bits (252), Expect = 9.970e-22
Identity = 50/96 (52.08%), Postives = 69/96 (71.88%), Query Frame = 1
Query:  250 QALYDMVYVERLPEEQQMASGLFLPSKENPRMHVCKVISVGSGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFA-GKKFSFVRYTSICAVV 534
            Q  YDMV VER+  +    SGLF+P ++ P++H+CKV+SVG GRE E+G V+P   ++ GD+V  K+P+GIGP+D+E A GKK SF+R   I AVV
Sbjct:   52 QCHYDMVLVERVQGKPPTESGLFVPQEDLPKLHLCKVLSVGPGREEENGRVSPMPEIRVGDIVIAKNPWGIGPKDEETADGKKLSFMRSQDIAAVV 147          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14583.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L438_9PHAE8.920e-9082.87Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FXF3_ECTSI6.590e-7486.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZNU0_9STRA1.510e-5268.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6T5R4I0_HETAK1.040e-3146.06Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7R9U985_9STRA2.370e-2753.04Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A7S1UEZ3_9STRA3.590e-2655.34Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A7S1XW59_9STRA6.070e-2655.34Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A8J2SZF1_9STRA6.910e-2655.45Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S1UZ75_9STRA9.010e-2248.00Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
B7FX98_PHATC9.970e-2252.08Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:3514219..3525894 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score241.1
Seed ortholog evalue4.1e-61
Seed eggNOG ortholog2880.D7FXF3
Hectar predicted targeting categorychloroplast
EggNOG free text desc.Chaperonin 10 Kd subunit
EggNOG OGs2E43F@1,2SB1V@2759
Ec32 ortholog descriptionChaperonin Cpn10
Ec32 orthologEc-07_002990.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size1509
Cds size558
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930326.7382329-UTR-C-linearis_contig7:3514218..35150971622930326.7382329-UTR-C-linearis_contig7:3514218..3515097Chordaria linearis ClinC8C monoicousUTRC-linearis_contig7 3514219..3515097 -
1690881013.8706262-UTR-C-linearis_contig7:3514218..35150971690881013.8706262-UTR-C-linearis_contig7:3514218..3515097Chordaria linearis ClinC8C monoicousUTRC-linearis_contig7 3514219..3515097 -
1622930326.8393285-UTR-C-linearis_contig7:3525326..35253641622930326.8393285-UTR-C-linearis_contig7:3525326..3525364Chordaria linearis ClinC8C monoicousUTRC-linearis_contig7 3525327..3525364 -
1690881013.9333756-UTR-C-linearis_contig7:3525326..35253641690881013.9333756-UTR-C-linearis_contig7:3525326..3525364Chordaria linearis ClinC8C monoicousUTRC-linearis_contig7 3525327..3525364 -
1622930326.8579924-UTR-C-linearis_contig7:3525860..35258941622930326.8579924-UTR-C-linearis_contig7:3525860..3525894Chordaria linearis ClinC8C monoicousUTRC-linearis_contig7 3525861..3525894 -
1690881013.948424-UTR-C-linearis_contig7:3525860..35258941690881013.948424-UTR-C-linearis_contig7:3525860..3525894Chordaria linearis ClinC8C monoicousUTRC-linearis_contig7 3525861..3525894 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930326.7528043-CDS-C-linearis_contig7:3515097..35152641622930326.7528043-CDS-C-linearis_contig7:3515097..3515264Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 3515098..3515264 -
1690881013.8830748-CDS-C-linearis_contig7:3515097..35152641690881013.8830748-CDS-C-linearis_contig7:3515097..3515264Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 3515098..3515264 -
1622930326.770316-CDS-C-linearis_contig7:3515771..35158771622930326.770316-CDS-C-linearis_contig7:3515771..3515877Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 3515772..3515877 -
1690881013.8963048-CDS-C-linearis_contig7:3515771..35158771690881013.8963048-CDS-C-linearis_contig7:3515771..3515877Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 3515772..3515877 -
1622930326.7916992-CDS-C-linearis_contig7:3516341..35164611622930326.7916992-CDS-C-linearis_contig7:3516341..3516461Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 3516342..3516461 -
1690881013.9084098-CDS-C-linearis_contig7:3516341..35164611690881013.9084098-CDS-C-linearis_contig7:3516341..3516461Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 3516342..3516461 -
1622930326.8135507-CDS-C-linearis_contig7:3525161..35253261622930326.8135507-CDS-C-linearis_contig7:3525161..3525326Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 3525162..3525326 -
1690881013.9230309-CDS-C-linearis_contig7:3525161..35253261690881013.9230309-CDS-C-linearis_contig7:3525161..3525326Chordaria linearis ClinC8C monoicousCDSC-linearis_contig7 3525162..3525326 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14583.1prot_C-linearis_contig7.14583.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig7 3515098..3525326 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig7.14583.1

>prot_C-linearis_contig7.14583.1 ID=prot_C-linearis_contig7.14583.1|Name=mRNA_C-linearis_contig7.14583.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=186bp
MRCAAVAVVIGCAVCAQAFVPTTSPRLSTSSRASAVRASRRHVRMSAASS
ELPTQAQRQQALYDMVYVERLPEEQQMASGLFLPSKENPRMHVCKVISVG
SGREGESGHVTPNDAVKPGDLVFVKDPYGIGPRDDEFAGKKFSFVRYTSI
CAVVPDSKDFEAAAREAGKMQEEMDKAAGSGGPVF*
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mRNA from alignment at C-linearis_contig7:3514219..3525894-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig7.14583.1 ID=mRNA_C-linearis_contig7.14583.1|Name=mRNA_C-linearis_contig7.14583.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=11676bp|location=Sequence derived from alignment at C-linearis_contig7:3514219..3525894- (Chordaria linearis ClinC8C monoicous)
CCTGTTTCCGCGCAAAGACGAGGCAAAGAGGGAGGTAAGCGGGCCGAGGT GCCTCCAGTTGCCTAGGTAGGGTTGAAGTGAGCCACTCCCACTGAACTCG CCTGTGCTTGAAGAGGGTAGCTCACCGACCCGCCGTAACATGCATGCCGA AATGAGGGAACCTGCCCAAACGTGAGGTACCCCGCCGCCGGCTGTGGCGT GTGGCACTACACTCATGCAGCGTTCCTACGCACCATTGCTGCGCGACCAA AGCTTGTGTAGCCGTCACAATGTCTAGAATCGTGCGTGTTTTTGGCTTTC GTTTTGTGTTGAAAGCGCGCGCGGTCTCTCTACCACCAGTGAAATCGTGG GATTCTCCACTCTGTTCCCTGTAGGTGATGCTCTCACTCGTGCGGCAGTT AGGTGTAGAAGGGTAGGCCACATACATGTTCGCATGCAACAGAGCCACTA CGCACCACGCGTCGATTGTGCTGACCTCGGGCCCTTCAACCACCGTCTTC CTTTCCTGTTGTCTCTCTCCGCGTTCACAGAGGAGACCCTTGTCGCACGA AAAACGGCTGGTAAAATCATGAGGTGTGCGGCTGTTGCTGTGGTGATCGG CTGCGCCGTTTGCGCGCAGGCTTTCGTCCCAACGACTTCGCCCCGTCTTT CCACATCGTCCAGAGCCTCCGCCGTGAGAGCGAGCCGAAGACACGTACGA ATGTCGGCAGCATCGTCGGAATTGCCCACGCAGGTGAGGCCATTGCGATT GCTGCAACATCGTCTCTTAGGTCCTGTAGATCCAAATGGAACCGCACTCG GCAGGTGTTGCGTAGAGCGAGGGTAGACTATACAGCAGCCACCCTGCAAA AGCGTTTGTGGGGGGTGCGGTTCTTGCGTTCACCTTCAGCGGGCGGTTGA ACCTTCAAGGAAGGGCTGGGTGGACGAAGCCGTGCGTACCTGTTGCGCAG AGTTTCGTGCCTCTCAGCTTCGTCTGCAAGTTTATTTTCTCTTCTTCTTG TGACCATACGTGCTCGTGCGAGACGTTACCAAAGGCGCAACAACACACCA AGCGTTGCGCACACACCGAACCACTGGGCCTGCTGCCGGGTGTTGCGTTC AAGAGTATGTACCAGTGTCATGCGTACATAACATTAAGGAAGCAGTGACG ATAAAAAATGCGTAGTTCGTCCGACTGCTGTTCAGTGACGGAAACTTTGA CTTAAACTTTGTCACCATATGTAGACGAAGTATTATTTTTGTCAGAGCCT CGTCGCACAACCCTCCTGGTTTTCTATTTGGGCCAAGTTGCGAGTTGCGA GCCAGATGTCGCGCCAAGACCCTGCTTGACGACCCCCCTCCTATCGTTCA AGATGCTAATTTTTGTCGAAGGATCGGGGGAGAAGTGCTATCGCTGTGTA TGGCGTAGCGAGTGCCACCTCTGTGGCGAAGAAGGCGGTCACACATGTAG TGTAGGGGGTGGGGTGTACAGCAGTAGGCGACCACATTGTAATACTCTCA AGTGGTATCATACGATATTAGAGTCAAGTTGTTGCAGCGTTTGATAAGTT TAAGTTTGTTTCGAAGAACGCCGGGAGGCGATGACGATAACCATCTTGCA TAGTTCATCTGACTTTTTCAGTGAGGATTCTTGCACCATCTTATCTACAT CCGAGCCTACCCTTTTTTTGTGCGCAAGTCGAAATAACACGCATTAAGCA TCGATACTCAAACACGCAGTATCGTGATTTATTTTGTTCCCCCCATCACA GCCTCAGCATCCTCTTCTCCCTGTGTGTACGCGTACGTATGCGTGTCATG CCGCAACGCCTAGAGTAGAACTCATGCATTTTCGTCAGACGTGTCAAGAT TTCTGACAGCTCCGTGCTCAAACTGCTCCTTCCGCATCCGAGCAGAGCTA AGGGGTGGCCTTTGTAGTGCATCGCAGTCCTAACCCGTAGAGTACCGGGT TACGTTTCTTGGACAACAGCAGTATCATATCATACCATACAAATCAACCG CCTTGGCGCTGATGCAATTTTTTCAAACATGTTAGACTTCTGACAGCATC GTGCTGAAAGCGTTCCGCAATCGAGCTGAGCCAGGGTGGGTCTCTCTATT ACTAAATAAAAGTAGGCGCTCTTATTTGCGGTTATCAATAACCTACAATT GCGTATTGCACGATGTATGTTCCTTGTGGATGTAGATATACTCTTCAGCG TTGTTTTTCCTCCTTGTAGACGGGGGAGGGGGTGGGGGGGGTACGCTACT CTTTTTTTTGACACACACCTCTTGGCGCTGATGCAATTCTATCATACATG TTAGACTTCTGACAGCTTCGTGCTGAAAGCATTCCGCAATGGAGCTGAGC CTAGTGGTGTGTGGCTTTCGCGCCATACTGCTGTCCTTTCCTATCCGAGT GTGCGCGTATTTTATCGTGTCCCGTCTTTTTCTTTTCGATTCGTTTGTTG TTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTTGTTGTTGT TTCCTTTATTTTTAGGCGACGCGCAGGCCGGCGAGCTACTTATACTGCCA ACAGCTTACGCCCATTTTCTCTGTCCTGCTTTTGTTTGTACATATGTAGC ACTGCGTAACTGTCTAGATGCCTCATACCAACACATGCCGTATGTATACG TATGTGCGCGCAGTTTTCTTGTGGGGGGGGCGGGCTTCATGTGCAGAAAT CGTTGTTTTTGTCGTGTCGTGCGGTGAGGACACAAGGCTATGAAGATACA AAAAATGCATAGTTCATCTGACTGTCAAGTGAAGATAACTTTGCACCATC TTACTTTTCGTCGGAGCCTTTTCTCAAACCTACCGAAGGCGCACGCTGCT GTGCGCGTTAGGGTCTGCTGGATTGAATTGGCATCGGTCTTCTGATTTCA CGAAACTGACTTCACGAAAGGAGAACCGGCCGCTAATTTTCCAGGCGAAA TGTCCTTCGCTCCTCAACCCGAGCCCCCACCATTTTCAGCCCTTTCTTTG CTCAGCACTCCCCTGGCTGGATCGCTACCCACCGTTCAGTCAGTATAGAG CGCATGGAAGAGAAAATAGAGAAAATCACCACACGAAGTTTATTTTGTAC ATGACAGGAAAACAGGAAATTTCCTGTCGAGGCCGTGACTCTCTCGGCAA CGAGCGAGCAGAGTGGAAAGCCTCGAGGGGAGGGCTGTGACGATGCAAAA AGCATAGTTCATCTGATTATTTACAACCATGACGAACAAGCTAACAAGCA GATATCTTTCGCTCCTATCCGAGCCCCCAGATCAACTATTTTAGCAGCAT TTCCCATCGTAAGTAGTACCAGAACCCTTCTGACCAGATGAGGTCCCCAT CGATGCGGAAAATCGCCGATAGTGTTTAGTAGTGTTGGATAGGCGATAAA TATCGCTTGGGTATAGGCGAGCGAAGCGAGCCCGGCGAGCACAGCGAGCG GAGGCGCGAAGGCGCTCGAAGCTCGCTGTGCGAGCCACCTAGGCCCCCCC CGGCTGGCGAGGGGGCCCCGCTGGAGGCGCCGCCGGAGGCCCGAAAATTG GGGCGTTTTCGCTTCATTTCCCATCAATAATGACGTAAATTAGGCCACTA CTCTAGGCCACCGTTGACCCTTCTTTTCTTTTGAAAATAGTGAAAGCAGA GTTTTTGGTTGAAGCAGAATGCTGCATCTAGAGAAATGCAAATGTTGGTT TTCTTGGAGCGTTTCATTGCCAACCTGTGCCCCGAAAAACAACTACTCTG TACCTGGCGCTACGTGGCTTCCGAGCTGCTGCCAACTAAACACTAAAAAC GAAAACCTACGACCAGCTGCGGTTCTACGAGCAGCTCTAGTCTACTGCAC GGCACACGGCCGACGGCAAACTTCCCACAAAACCACACTATAGCAGCTGG TCAAAGGACCCTGAATCCTCTTCTACCCGACCGAGAGCCTGCTGCGAAAT CCCGCTGGACCACGTTAACCCGTGCGAACCGTTCAGGAAAACAAGCGCAT CGACCGTGTCATCCCCAAGGCGGTTGCGTTTTTTGACGTGACGATGTTGC CGGCCATGGAGAAGACGCGTTCAGACGCCGCCGATGACGGAGGAATCACC AAGTACTTGACTGCCAGCCTAGCCAGAGATGGGAACGAGAATTGGTGTCG GCACCACCAACTCAGCTCATCCTTTGAGGTCTGCTCGTGCTCGGGATCAA GGCCTTGCTCAACAACAAAGCGCCGAAGCTCCAGCTCTGCAGACTGCACT CTTGCTTCAAGTGAGAGCCTCGAAGGGGACGCGCGGCGCTGGTTTGCTGC GCCTGTCCGGCGCCGCCTGATCCACCAGGGCCCTTGCCCCTCGATGCCAT GACGGCCATCGTTCGAAAGCTGAGGCGCTGCTTCTTCGCCGGCGGCTCAT CGACGGAAAGGTCGACGGACCCGCCGCCCGCACCACCGCCCGCACAGCCA TTATCAGCCGACGAGCTGTCGGCCGCTTTCTCGGCATCGATGTCCTGGGT GAACAGGACTTTGAGCTCCTCCACGAGAAGATCGCGCCACTGCTTCTGCT CCGCGTCCGATAGCCACTCGAGATCTTTCGTGCGGGCACTGAGCGCGGAC GCCATCTTCATCACCGCGGGGACATTTTCCCAGCGATCTTCGTGGTCGAC GAGCATCGCTTTGCCAGCCACGCGGAACGGGCCTTGGGTGAACACCGCCG ACTCCTTCTGGATGTGGTCGTTCAAGACGTTCATGATGCAGGGGACCTCC GCCAGGCCAAGGTAGTCACCCTCCATGGTCTCCACCGCCGACGCGAAAGG CTCCAACATCCTCACCATCGACGCCGCGTTTGTCCAGTCCACGTCCTGGA GGACGATGTCCACCTTGGAGCGTTCGTTGGCGAGCTCGACGGTGTGAAGA ACGCTGCTCTTGTGCTCCAGGGACACAGTGAGCATCGACAGCCACGACCA CCACCGCGTGACACAGCCTGTAGGGATCCTCGCAGGTGTTTTGGTGGGAA ACCTCAACTGAATACATACGGGGATCAGGGGGGAGAAACACAGGAGGGGG CGGGGATCGATGAGAACCCAACAGCACGACAAGCAAACGTTTGCCTCTTT ACTCTGCACATGCGTGCGCGGCTAGCGGCAAGACTGCAGTGGTGCAGTGA CGATGTGATGGTGTCAACAGCGTGCGAAAAATAAAAATGTAAATACAAGC GTAATTGCTCACCTTCTGCGCCTCAAAGAACGCTCCCAGCGACAGCGCAG ACTTGTGCAGGTGCCCGGCAACCTTGGTGAACCTTTTGAGGGTCTCCTTC AGGCCGGGAGTGTTGACGAACTTCTGCACCGTGAGCTCAGTCTTGTGGCA TCCACATCCAAGCCACTGAATCTGCGGCGCCATGTGGACGAAGGATCCCA CACCGGTGTGCGCATCGGGGCGAAGCTCACGAGTATGCTGAAGGCTCTTG GGATCGAGAACCAAGTGATCAGCATGACGACCGACACGGCTGCGAATATG AAGAACGGCGTCATTGTTAATTTTAATGGACAATGACGCCGTTCTTCATA TTCGCAGCCGTGTCGGTCGTCATGCTGATCACTTGGTTCTCGATCCCAAG AGCCTTCAGCATACTCGTGAGCTTCGCCCCGATGCGCACACCGGTGTGGG ATCCTTCGAAGATCTCGCAGCCTGCGGTGCCGCACTTGACGGTCCACTCG CTGCGGGACGTCTCTATCCAGTGAAAGTCAGAGAGATGAAGGACACCTGG GTGATTTGGCGAAATATGGCAGAACAAGAAACAATACGCACACGAAAATG CACGCATCAAAACAACGTCCCTAACTAGGCAACGTACCTCAAATGCCACC CGAGCGTTCTCGTAGATCGTGAGTGTTGTACTGCTATTTGTCATCAACTG CTGTTTGATGTTTATTATATCGCGGGAAGCAGAAGAGTTATACTTACGTT GGTGTTGGATGTCCAAATGTCGCTAGTCGCCGCTAGGCTTTTCCCCACCA GCATGCGCTTGAGGTTCTCCACGGCGACTCTCTTCTTGTTCATCAACTCC GTCCGAAACTTCTTTCGGCCGCCGGCGTCGAAGGTAGCGCTGCCAGTCGC TGTCTGCAGCACCTTCTCAAGCGCTGGATGGTCCACAACCGAAAGCGGCT GGTTGTCGAGGATCACCCAATCGAGGAGGTCCGAGGCGACCGCTTTGGTG CGGGATAGCCTGACCGTAGGAAGGTTGTTTTTCCAAAGAGCTTTGTTGGC ATTTATTGTATTTATGTATGATGTGTGATGTGTGACAAAATACAAAATAC ACAAGTCTAGTCTAATTAGCGGTAGACCACATCCTCCGTACTTTGTGAAC ATTGAACGCGCTACAATACACGCTTCAACACGCAGCCTGCTGTAGCTGCT ATACGGTGCCACTAATGAAACTTAGACTAATTTGAAAAGAACAGCGTACA TCGTATGGCACACCACCAGGAGGAGGAGAAAAAATAACACGGGAACTAGG AATAGCAGTGCAAGGAGGTACCGCCACAAATACAAAAGCGTGATGCTTCA TTTACTCACTGGATTTTGCCATCGAGGGTCGTTTGGCCAGCGGGCACGCC GGTCGGAGACGGCTTCTTGAAGCCCTGCGCGGCTGCAAGCTTCGTTGCGT GCCCCTCTTTGTCCACCACATTTGGCGAGCTGTAGTGAGCTACAAGGTTC GATGTATTGCCCTGCGGCGTCGAAACTACTTGTGCGCATACAGAACCCAC GGGCCGCTGTTGCGGGTCCACCAGGAATAGGCCCCCCTTCCACACGAAAG ATCGCCCTCCCGTCTTCTTCTTGCATGTTTTGAGGTCGACGACGGTGGGG CTGTCGGTGCCGGCGGCAGGGACCGCGTCATTGTTCGCGGCAGAGGCGGC CGCCCCGCCGAACGTGCTACTCATGCCACCGCAGGGCAGCAGAAACAAGT TGTGTACTGTGTACTTCCTCTGTCCCATAAATCTGTGCCGAATTGATTTT ACGGCCTCTTAACCGTGTCCGGTGTCTTCGGCGTTAATTTTTTCGAAATC TTGAGAGTTTTTTGGGTTGAAATCCATCTTTTTTTTATTTCGGCTGGTGC TTAAACCATGCGGACGAAGGGCCGGAAAACTTTGAGCCGGCCCAAAAACG GCCATATTTCGCTCCTTTCCAGGGGGGGCGGTGGGTGGGGCACTTAGCCT AAACCTCCCCAGAAAAAACAAGAATTCTCCCCAACCCCAAGGCTAACCCT CCCTCTCCTCAAACATCCATGTCGCGTCCCCCTATGCTAAAACCAGTATA ATAGTGGCTCCCACACTAAAACCAAGACACTAAGGTCCAACACTAAAACC AGTACACTTGGGGGGCCCACACAAAAACCAAGACACTTGCGGGGCAAAGG AACAGCAGTAGGGCAATACCCAACCCCCCCTCTACTAGACGATCCATGTC GCGTCCCCCTATACTAAAACCAGTATAATAAGGACCTCACACTAAACCCA AGACACTCGGTGGTCCCACACTATAACCAAGACACTTGGGGGTCCCACAC TAAAACCAAGACACTTGCGGGGCAAAAAAAACAACAGAGTAGGGCCCGAA CCCAACCCCCCTCTAATCAACGATCCATGTCGCGTCCCCTATACTCAAAC CAGTATAATAGTGACCCCACACTAAAACTAAGACACTTGGGGTTACACAT TAAAACCAAGATATTTGGGGGGACCACACTAAAACCAAGACACTTGCGGG CAAAAAAAGTGTCTGTTGGTGTAAAATATGGTAAAACATTCTCAAAAAGG GCCAAAATGGGCATATTTTGACCTAATTTTAGTGTATAACACGGTCTTCG ATTTTTTTATTTTATTTTTAGTCAGCTTTGTATGTGTTTTGCCTTTCTAA CGCACCTAACCACAGGCTAAACGTCAACGTGTAAGTACCCAAACGAATTC ACGCGCCATTCGGCACAGACTTATGGGACAGAGGAAGTATAAGGCTACTG CTGTGTGTGCGCGCGTGAGTACGTTGTGTTTAGCTAGTTGTGTTCCTGCA GCGCAGACCACAAGGCAGCGCAGGCACGCCGCGGGGGTTTCGTGTGAAAG TTCTGCATACCAGGGGGTTCCGTGGGTGGTTTTATCGTCGAATTATCGTA TCGTATCGAAATATCGTATCGTATCGTAAGGCCCTAAACCCAGCGATACG ATAGACGATACGATATTACGATACGATATATCGAATTTTTCGATACGATA TCCAACACTAGTGTTTAGCGTGCCTACATCAGCAGTAGTCCCCCGAGTTG GGCACGTAGACCGCTAACTTCTAGTCGGAAAATGTTTGAGTACCGATATC CAACGTTGTGCAGGAAAATGTCGACGCTTCTGCCGCGGTTCTCTGTCTCT CGCTCTCCCTCGGCAAGAGTAGATAATAGTCCAGTCTAAGTCAAAGGGCT GCGATGATGCAAAAGGCTTCGAGTTTCGTGTGATGTATCTAAACATGGAC GAACCAGCTATCACATCAAGCAAATGTCTTTCGCTCCTATCCGTTCTGCC CGGTTTGTACGATAGCTTTTGTGCTTTAACGCACTTTTGCCTTTTAGTTT TCAGGGATGTTTGGCTTGCCTCTTATTTTTGTCTTGTTTTTACTTCTTCT GCCCGCCCGCCTGCCTGCCGGGCCATGACGACGCCAAAGCTTTATCTGAC TTTCTCCAGTGAAGAACAAGCTGATAGCAAATGTCTTTCGCTCCTATCCG AGCCCCACGCCCGGGTTGTAGCTTTGTGCATTCGCGCACTCTTTGCTCTG TTTTTTTTCCGGGGATGTGTTGCCGCTTCTTGTTGTCTTTTTTTTTTTTG CATCTACCCGCCCACCTGCCGGGCCATGACGACGCCAAAGCTTTATCTGA CTTTCTCCAGTGAAGAACAAGCTGATAGCAAATGTCTTTCGCTCCTATCC GAGCCCGCCAGATGATCACCCGCCGGCTCGCCGGCCCCTTTTTTTTTCCT TGGATTTTGTCGTGTTCGATTCGTACTGTAACCGTTCGCCCTTTTTACTC CTTTTTGGTTGTCTGATCCTGCTACACTTTTGTTGGTCGAGTTGTTTTCT TCGCCTCTCGTACATACATATTTCTATGATGCAAAAGAACCTGGCACACA ATCTTGACTGATTTTCGTTGTCGTATGTGTGAGTGTCTTGCGAACGCGAA ATGAGCGTGTTTGCGCATCCGCCCTCCGCTTCGCTCACCGCGAAACAAAG TGAACCGGCTGGCTGGCAGAAAGTTGACGCAGGGTTGTGGCAGATCCTCT ATGCATTTTCAACAAGCATGCCAACTTATTTGCGCCCCCCCCCGCATTCC TTGCGTTGTGCTGGTGCGGGCCATACCGCTTTCTCTTTTGTGGCGTTTTT TTTGTCTCTCTCGCCCATGCGTCTCATTATCAGGCTCAGCGACAGCAGGC CTTGTACGACATGGTGTACGTGGAACGACTGCCTGAGGAGCAGCAGATGG CGTCGGGGCTCTTCCTGCCCAGCAAGGAGAACCCGAGGATGCACGTTTGC AAGGTAAATTCGCCGAATTATGTGGGATGTTGAGGGGTTTTGTGTCGTGT TCTAAATCGCTCGTGTGCTGAAGTTTGTATGTAGTCGTTTCTACATACTC CGGAGTTGGTGGCTGAAAAACAAGACGGTTCGTATGCATGTTTGCAGAGA TGTATTGAAATCGACCGAGAGGCGTGGCGAGAGGGTTGAGCGTGTGCCAA CTCAGGAGATAGCGGAGGGATGCCTCTCTCCTCGCGTTCTGCGGCGGTTG ACGGCGTTAGCTTCGTGAGGATACCGTAGTTCTGGTCCACGGGGTGTCAG CAGGGTCAGCCTTCAAGAGCAAATTACATAAAAGTACAGGTTTCCTTTGA CACACCTTGAACCCCGAAAGCGCCTCGCTATTTATAGTCTTGCGTGATGT GCGAGTTTCCGCGGTGCTGACGTCGAAGGCCGGTGCTTGCTTTGTTCCTG TGCCTGCTGCGGCACAGGTCATCTCCGTGGGCAGCGGGCGCGAAGGGGAG AGCGGACACGTTACGCCGAATGACGCCGTCAAACCGGGCGACCTCGTCTT CGTCAAGGACCCCTACGGCATCGGTGAGGGAAAATGAAATATTGACAAGG AGCAATGATGTGGCTCTCTCTCTCTTCTCTTTTCTGGATGAGTCATTTTA GATCCAGTTTTCTGTCCCTGCGTAATCGTAGCGTGTCTCGGTTCAAGATT TGAAGAACTGCATGCGTGTCTTGCTTTCCAGCGACTACCAGCCTAGTTGT GTTTAACGGTTCTAGCCTTAGGCAGACGGACGATACGTTGGGAAGGGATT ACCTATACTACTACCTCCTGTACTTTTGGCCACCACCATGATCTGGCTCG ATACTTAACGTATTTATTTCTCGTGGTGTGCCGACGACAGAGCAACTCTC AAGTATCAGCGTCCCTGTACTTTAGCTCTCAGTTCAATGTCTCCGTGTCT CATGGATGTGTGTGTCATCGTTCGTGAAACCCGTCATTGTTTATGGGTCT TGTCTTTTTCTTACCCTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC CTTCCTTCTTTTCTTCGTTCCGGTCGGCAGGCCCGAGGGACGATGAGTTC GCGGGGAAGAAGTTCTCGTTCGTCCGCTACACGAGCATCTGCGCCGTAGT CCCCGACTCGAAAGACTTCGAGGCCGCCGCGCGAGAAGCGGGCAAGATGC AGGAAGAGATGGACAAGGCTGCCGGCAGCGGCGGCCCCGTGTTTTAATTT AATTCTTGTTCTGAAATACTTTTTTGTACTACATGTACACGCATGTATGC GGTTTTCAGCTCTCTGCGTGCGTGGTTGAGGGCTGCGATAAATACTCCGT ACCCGCATGGTTGGCGACGAGTATAACTGCTCTTTGCCTTTTTGTTTTTA GAGACATGTAAGGAAGGTCGGAGGTTGACTTGGGTGGCGACAAAACGTCT TGCTGTTGCCGTTTTTGTTGCTTGACCGCCTGCTGCTTTGCGGAGTGGAG GGAGCAGCCGCGTCGGGCCTGGGTCTATCTGATGGGGTATCATAGCGGGT TTTCTTGAGGCTTGTTGTCCTGCCGCTGTACCGTTTTTTTTTTGTACAAG ATTTGGTGTGGTTTTTAGAGGAGGGACGAGCGGTTTTTACACAGGCTAGA CCACTTCAAAAGTTGAACAAGTGGAGTGCGTGTTCCGCCCCCGCCGTTCG ACAGAACAACGAGCATGCTCTCTCGCGCGTGATTTGTAGAGGATCACCGT GTTGTAGGACACACATGAAAACGACTACTGCGCGGATCGCACTCGAGGCA GCAGACTAAACGAGTGTGGGCACACGTGGTTTTCCTTCATGCCGGAGATT TTTCCCGGTCGTGACTCTGATTTCCAATTTACAAGTGTGTGTCGAGACAC ACGACGGTGCCCGTGTGGGGTTCTCGTTTTCTGTTTGTAAATCTCATCTT AGACAACCTTTTTGAGAATCGATCGATCCACTGGGTGGTACTCTGGAACG CCGAAACTTGAAAATTGAATGTTTTGATGTCCTTGGTGCCTATTTTCATT TGGATGTTGCACCAGGCACGAGAGAGACTAGAGAGGGAGTGAGCGTGCAA CAAAAACTTTATGACACGGATGCCTG
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Coding sequence (CDS) from alignment at C-linearis_contig7:3514219..3525894-

>mRNA_C-linearis_contig7.14583.1 ID=mRNA_C-linearis_contig7.14583.1|Name=mRNA_C-linearis_contig7.14583.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=1116bp|location=Sequence derived from alignment at C-linearis_contig7:3514219..3525894- (Chordaria linearis ClinC8C monoicous)
ATGAGGTGTGCGGCTGTTGCTGTGGTGATCGGCTGCGCCGTTTGCGCGCA
GGCTTTCGTCCCAACGACTTCGCCCCGTCTTTCCACATCGTCCAGAGCCT
CCGCCGTGAGAGCGAGCCGAAGACACGTACGAATGTCGGCAGCATCGTCG
GAATTGCCCACGCAGATGAGGTGTGCGGCTGTTGCTGTGGTGATCGGCTG
CGCCGTTTGCGCGCAGGCTTTCGTCCCAACGACTTCGCCCCGTCTTTCCA
CATCGTCCAGAGCCTCCGCCGTGAGAGCGAGCCGAAGACACGTACGAATG
TCGGCAGCATCGTCGGAATTGCCCACGCAGGCTCAGCGACAGCAGGCCTT
GTACGACATGGTGTACGTGGAACGACTGCCTGAGGAGCAGCAGATGGCGT
CGGGGCTCTTCCTGCCCAGCAAGGAGAACCCGAGGATGCACGTTTGCAAG
GCTCAGCGACAGCAGGCCTTGTACGACATGGTGTACGTGGAACGACTGCC
TGAGGAGCAGCAGATGGCGTCGGGGCTCTTCCTGCCCAGCAAGGAGAACC
CGAGGATGCACGTTTGCAAGGTCATCTCCGTGGGCAGCGGGCGCGAAGGG
GAGAGCGGACACGTTACGCCGAATGACGCCGTCAAACCGGGCGACCTCGT
CTTCGTCAAGGACCCCTACGGCATCGGTCATCTCCGTGGGCAGCGGGCGC
GAAGGGGAGAGCGGACACGTTACGCCGAATGACGCCGTCAAACCGGGCGA
CCTCGTCTTCGTCAAGGACCCCTACGGCATCGGCCCGAGGGACGATGAGT
TCGCGGGGAAGAAGTTCTCGTTCGTCCGCTACACGAGCATCTGCGCCGTA
GTCCCCGACTCGAAAGACTTCGAGGCCGCCGCGCGAGAAGCGGGCAAGAT
GCAGGAAGAGATGGACAAGGCTGCCGGCAGCGGCGGCCCCGTGTTTTAAG
CCCGAGGGACGATGAGTTCGCGGGGAAGAAGTTCTCGTTCGTCCGCTACA
CGAGCATCTGCGCCGTAGTCCCCGACTCGAAAGACTTCGAGGCCGCCGCG
CGAGAAGCGGGCAAGATGCAGGAAGAGATGGACAAGGCTGCCGGCAGCGG
CGGCCCCGTGTTTTAA
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