prot_C-linearis_contig7.14582.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14582.1
Unique Nameprot_C-linearis_contig7.14582.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length519
Homology
BLAST of mRNA_C-linearis_contig7.14582.1 vs. uniprot
Match: D7FXF1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXF1_ECTSI)

HSP 1 Score: 691 bits (1784), Expect = 1.560e-245
Identity = 429/527 (81.40%), Postives = 436/527 (82.73%), Query Frame = 0
Query:    1 MGERGYQLKGANNKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKICERPYTVFRWKAGTEGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRDKFLAEEDRLEVPGSDANREFMTQMHEKQLAEGGNPYANKPLNQKLLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMSKQDELPKLEPPEDEGISSLWLGNMSADIIPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEVAAEQLYKCLVIKGRLLRLNWATRSEESGTSGFNGPEGGCRR-IGNGDRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAGPYQPVPLPPVPGLPAGAXXXXXXXXXXXXHLQGYQPPXXXXXXXXXXXXX-------------GPRPPLYNGGGRGQHHH--ARGPPIPSYGPVRGXXXXXXXXXXXXXXXXXGXXXXXXXAP---YYASMDPHRLGAQPARPLLPTPAGAAA 508
            MGERGYQLKGANNKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKICERPYTVFRWKAGT GRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRDKFLAEEDRLEVPGSDANREFMTQ+HEKQLAEGGNPY+NKPLNQKLLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMM++QD+LPKLEPPEDEGISSLWLGNM+  I PEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAE AAEQLYKCLVIKGRLLRLNWATRSEESGTSGFNGPEGG RR I +G  K    XXXXX                XXXXXX            A PYQPV LPPV       XXXXXXXXXXXX LQGYQPPXXXXXXXXXXXX              GPR P YN            RGPPIPSYGPVRG   XXXXXXXXXXXXXX XXXXXXX     YYASMDPHRLGAQPARPLLPTP  AAA
Sbjct:    1 MGERGYQLKGANNKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKICERPYTVFRWKAGTTGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRDKFLAEEDRLEVPGSDANREFMTQVHEKQLAEGGNPYSNKPLNQKLLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMARQDDLPKLEPPEDEGISSLWLGNMADYITPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEAAAEQLYKCLVIKGRLLRLNWATRSEESGTSGFNGPEGGGRRRIESGSSKAKEGXXXXXAAGEAGGADAGEGSKAXXXXXXGAEKK-----AEAAPYQPVSLPPVXXXXXXXXXXXXXXXXXXXQLQGYQPPXXXXXXXXXXXXAVAPAGRGQYAPPPGPRLPTYNXXXXXXXXXXXTRGPPIPSYGPVRGSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXYYASMDPHRLGAQPARPLLPTPPPAAA 522          
BLAST of mRNA_C-linearis_contig7.14582.1 vs. uniprot
Match: A0A7S3YHN5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YHN5_HETAK)

HSP 1 Score: 419 bits (1077), Expect = 2.600e-141
Identity = 199/321 (61.99%), Postives = 244/321 (76.01%), Query Frame = 0
Query:    1 MGERGYQLKGANNKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKICERPYTVFRWKAGTEGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRDKFLAEEDRLEVPGSDANREFMTQMHEKQLAEGG-NPYANKPLNQKLLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMSKQDELPKLEPPEDEGISSLWLGNMSAD--IIPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEVAAEQLYKCLVIKGRLLRLNWATRSEES---GTSGFNGP 315
            MGERG+++K   NK+ WEE++FP+VCETCLGDNPYVRMTKE  GK+CKICERPYT FRW+ GT  R KSTQLCQTC+KLKN CQ CVLDLQYGLPVEVRDK+LA ED++ VP SDANRE+    H   +  GG   Y   P NQ LLR+AR+ PYY+RN PHKCSFYAKGEC RG +CPFLHEMPTD  DPLA+QN RDR+YG+DDPVAAK++ + DE+P L  PED  + SL++G +  D  +  +DL+D FY FGEL SIR+VP +  AFV++T R AAE AA+ +Y CL +KG  L+L+WA+R +E    G +G  GP
Sbjct:    1 MGERGFRIKTDINKEGWEEAEFPVVCETCLGDNPYVRMTKERFGKSCKICERPYTAFRWRPGTGARFKSTQLCQTCSKLKNVCQVCVLDLQYGLPVEVRDKYLAVEDQVVVPESDANREWFAGQHNAMVEAGGAGGYGAAPRNQTLLRLARNKPYYRRNLPHKCSFYAKGECTRGDRCPFLHEMPTDPNDPLANQNTRDRYYGKDDPVAAKLLKRIDEMPALRTPEDPSVKSLYVGRLPMDGSVTQDDLKDVFYQFGELESIRVVPRQSCAFVEYTLRDAAERAAQTMYNCLYVKGHRLQLSWASRRKEDALGGAAGGGGP 321          
BLAST of mRNA_C-linearis_contig7.14582.1 vs. uniprot
Match: A0A6H5K028_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K028_9PHAE)

HSP 1 Score: 407 bits (1046), Expect = 8.210e-136
Identity = 289/382 (75.65%), Postives = 295/382 (77.23%), Query Frame = 0
Query:  145 LLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMSKQDELPKLEPPEDEGISSLWLGNMSADIIPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEVAAEQLYKCLVIKGRLLRLNWATRSEESGTSGFNGPEGGCRR-IGNGDRKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAGPYQPVPLPPVPGLPAGAXXXXXXXXXXXXHLQGYQPPXXXXXXXXXXXXX------------GPRPPLYNGGG--RGQHHHARGPPIPSYGPVRGXXXXXXXXXXXXXXXXXGXXXXXXXAP---YYASMDPHRLGAQPARPLLPTPAGAAA 508
            LLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMM++QD+LPKLEPPEDEGISSLWLGNM+  I PEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAE AAEQLYKCLVIKGRLLRLNWATRSEESGTSGFNGPEGG RR I +G  K   XXXXXXXXXXXXXXXXXXXXXXXXXXX               PYQPVPLP         XXXXXXXXXXXX LQGY+PP                         GPR P YN  G   GQHHH RGPPIPSYGPVRG XXXXXXXXX        XXXXXXX     YYASMDPHRLGAQP RPLLPTP  AAA
Sbjct:    3 LLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMARQDDLPKLEPPEDEGISSLWLGNMADYITPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEAAAEQLYKCLVIKGRLLRLNWATRSEESGTSGFNGPEGGGRRRIESGSSKAKEXXXXXXXXXXXXXXXXXXXXXXXXXXXAEAEKK-----AEVAPYQPVPLPXXXXXXXXXXXXXXXXXXXXXQLQGYRPPPPSAYPQQQQPAVAPAGRGQYAPPPGPRLPTYNNNGVSAGQHHHTRGPPIPSYGPVRGGXXXXXXXXXRRGPPPGXXXXXXXXXXXXXYYASMDPHRLGAQPTRPLLPTPPPAAA 379          
BLAST of mRNA_C-linearis_contig7.14582.1 vs. uniprot
Match: A0A835YZV2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZV2_9STRA)

HSP 1 Score: 400 bits (1027), Expect = 3.590e-132
Identity = 187/308 (60.71%), Postives = 231/308 (75.00%), Query Frame = 0
Query:    1 MGERGYQLKGANNKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKICERPYTVFRWKAGTEGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRDKFLAEEDRLE---VPGSDANREFMTQMHEKQLAEGGNPYANKPLNQKLLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMSKQDELPKLEPPEDEGISSLWLGNMSADIIPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEVAAEQLYKCLVIKGRLLRLNWATRSE 305
            MGERG QLK   NK  WEE+DFP+ CETCLGDNPYVRMTKEP GKACKICERP+  FRWK GT  R KSTQ+CQTCAK+KN CQ C+LDLQYGLPV+VRD+ LAE +  +   +P SD N ++M Q   +  A GG+ Y     NQKLLRMAR+ PYY+RN  HKCSF+AKGEC RG +CPF H MPTDR+DP+AHQN+RDRFYG+DDPVA K++ K  + P+L PP D  IS+LW+G ++  I  +DLRDA Y++GE+ ++R++  K  AFV++TTR AAE AA  LY+ L I G  LR++WA R E
Sbjct:    1 MGERGMQLKSDLNKSGWEEADFPVACETCLGDNPYVRMTKEPAGKACKICERPFCNFRWKPGTNARYKSTQVCQTCAKMKNVCQVCILDLQYGLPVQVRDRVLAEGNEPDDDGIPKSDTNLQWMVQQQTQLQASGGSGYDAAGTNQKLLRMARNAPYYRRNMAHKCSFFAKGECTRGDRCPFQHVMPTDRSDPMAHQNVRDRFYGKDDPVANKILGKMADTPQLLPPADPAISTLWVGGLTPSIREQDLRDAMYAYGEIANVRVIAPKGMAFVEYTTRAAAETAATALYRSLSIHGVPLRVSWAVRRE 308          
BLAST of mRNA_C-linearis_contig7.14582.1 vs. uniprot
Match: K8YS72_NANGC (Pre-mRNA-splicing factor RBM22/SLT11 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YS72_NANGC)

HSP 1 Score: 385 bits (988), Expect = 3.530e-126
Identity = 184/326 (56.44%), Postives = 237/326 (72.70%), Query Frame = 0
Query:    1 MGERGYQLKGANNKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKICERPYTVFRWKAGTEGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRDKFLAEEDR----------LEVPGSDANREFMTQMHEKQLAEG-GNPYANKPLNQKLLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMS------KQDELPKLEPPEDEGISSLWLGNMSADIIPE-DLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEVAAEQLYKCLVIKGRLLRLNWATRSEESG 308
            MGERG Q+K   NK+ WE SDFP+VCETCLGDNPYVRMTKEP GKACKIC+RP+T+FRW+ G + R K T++CQTCAK+KN CQTCVLDL YGLPV+VRD  LAE             + VP SD N+++    H++ +AEG  + Y    +N+KL+R++R+ PYYKRN PHKC+FYAKGEC RG +CPFLHEMPT R+DPLA+QNI+DRFYGQDDPVA KM+       K+D+ P + PP D  I +L +G M    + E ++R+AFY FGE+  +R+VP K  AFV++TTR+AAE AA+ L+  L ++G  LR++WA R   SG
Sbjct:    1 MGERGMQIKADLNKEGWESSDFPLVCETCLGDNPYVRMTKEPAGKACKICDRPFTIFRWRPGAKARFKKTEVCQTCAKMKNVCQTCVLDLTYGLPVQVRDSVLAEAAAAGEGGAASYAMTVPQSDTNKQWFAGQHDRMVAEGHADSYGKAQINEKLMRLSRAQPYYKRNLPHKCTFYAKGECTRGDRCPFLHEMPTSRSDPLANQNIKDRFYGQDDPVAQKMLGRAASKEKEDQAPLI-PPTDPEIKTLMVGGMEGGAVTETEMREAFYGFGEVAGVRMVPAKHLAFVEYTTREAAEAAAKALHNNLTLQGLRLRVSWALRQAGSG 325          
BLAST of mRNA_C-linearis_contig7.14582.1 vs. uniprot
Match: A0A7J7K4C1_BUGNE (Pre-mRNA-splicing factor RBM22 n=1 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7K4C1_BUGNE)

HSP 1 Score: 358 bits (920), Expect = 2.620e-116
Identity = 172/306 (56.21%), Postives = 223/306 (72.88%), Query Frame = 0
Query:    9 KGAN--NKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKICERPYTVFRWKAGTEGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRDKFLAEEDRLEVPGSDANREFMTQMHEKQLAEGGNPYANKPLNQK----LLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMSKQDELPKLEPPEDEGISSLWLGNMSADIIPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEVAAEQLYKCLVIKGRLLRLNWATRSEESG 308
            K AN  N++ WEE+DFPI+C+TCLGDNPYVRMTKE  GK CKIC RP+TVFRW  G   R K T++CQTCAKLKN CQTC+LDL+YGLPV+VRD+ L   D  E+P SD N+E+     EKQLAE G P  +   +Q     LL++AR+TPYYKRN+PH CSF+ KGEC RG +CP+ H+ PTD  DPLA QNI+DRFYGQ+DPVA K++ +  ++PK+ PPED+ I++L++GN+S DI  +D+ D FY +GELRS+ IV G   AFVQFT R AAE AA++ +  L+I G+ + + W     + G
Sbjct:    5 KSANTYNRQGWEEADFPILCQTCLGDNPYVRMTKEKFGKECKICARPFTVFRWCPGARMRYKKTEVCQTCAKLKNVCQTCLLDLEYGLPVQVRDQALKMRD--EMPKSDVNKEYYIANAEKQLAEDG-PSGSLGKSQAPSDILLKLARNTPYYKRNRPHICSFWVKGECKRGEECPYRHDRPTDPDDPLADQNIKDRFYGQNDPVANKLLDRYSQMPKISPPEDKSITTLYVGNVSDDITEKDISDNFYQYGELRSVNIVKGSQCAFVQFTQRSAAEAAADKAFNKLIINGKRMNIKWGKSQAQQG 307          
BLAST of mRNA_C-linearis_contig7.14582.1 vs. uniprot
Match: V4B970_LOTGI (Pre-mRNA-splicing factor RBM22 n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4B970_LOTGI)

HSP 1 Score: 349 bits (896), Expect = 1.190e-113
Identity = 164/299 (54.85%), Postives = 225/299 (75.25%), Query Frame = 0
Query:    9 KGAN--NKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKICERPYTVFRWKAGTEGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRDKFLAEEDRLEVPGSDANREFMTQMHEKQL--AEGGNPY---ANKPLNQKLLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMSKQDELPKLEPPEDEGISSLWLGNMSADIIPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEVAAEQLYKCLVIKGRLLRLNW 300
            KGAN  N++ WEES+FP++C+TCLGDNPYVRM KE HGK CK C RP+TVFRW  G   R K T++CQTC+++KN CQTC+LDL+YGLPV+VRD  L  +D L  P SD N+EF  Q  E+++  ++G NP    ANK  +  LL++AR++PYYKRN+PH CSF+ KGEC RG +CP+ H+ PTD  DPLA+QNI+DRFYG +DPVA K++ +  ++PKLEPPEDE +++L++G +S  I  +DL++ FY FGE+RS+ +V  +  AFVQFT+R +AE AAE+ +  L++KG+ L + W
Sbjct:    5 KGANTYNRQNWEESEFPLLCQTCLGDNPYVRMMKEKHGKECKTCNRPFTVFRWCPGARMRFKKTEVCQTCSQMKNICQTCLLDLEYGLPVQVRDAALRVQDSL--PKSDVNKEFYMQNVEREIENSDGTNPVGAIANKVPSDMLLKLARTSPYYKRNRPHICSFWVKGECKRGEECPYRHDKPTDPDDPLANQNIKDRFYGTNDPVADKLLRRYQDMPKLEPPEDETVTTLYVGGLSEAIEVDDLKNHFYQFGEIRSVNVVQKQQCAFVQFTSRTSAEAAAEKSFNKLILKGQRLSIKW 301          
BLAST of mRNA_C-linearis_contig7.14582.1 vs. uniprot
Match: UPI001425A43C (pre-mRNA-splicing factor RBM22-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425A43C)

HSP 1 Score: 353 bits (905), Expect = 2.760e-113
Identity = 170/311 (54.66%), Postives = 226/311 (72.67%), Query Frame = 0
Query:    9 KGAN--NKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKICERPYTVFRWKAGTEGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRDKFLAEEDRLEVPGSDANREFMTQMHEKQLA--EG----GNPYANKPLNQKLLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMSKQDELPKLEPPEDEGISSLWLGNMSADIIPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEVAAEQLYKCLVIKGRLLRLNWATRSEESGTSG 311
            KGAN  N++ WE++DFPI+C+TCLGDNPYVRM KE  GK CKICERP+T+FRW  G   R K T++CQTC+K+KN CQTC+LDL+YGLP++VRD  L  +D  ++P SD N+EF TQ  EKQLA  EG    G   A   L   LL++AR+TPYYKRN+PH CSF+ KGEC RG +CP+ H+ PTD  DPLA QNI+DRFYG +DPVA K++ +  ++PKLE PED  +++L++G +   +  +DLRD FY FGE+R+I +V  +  AFVQFT+R AAE+AA++ ++ L+IKGR L + W     + G  G
Sbjct:   18 KGANTYNRQGWEDADFPILCQTCLGDNPYVRMIKEKFGKECKICERPFTIFRWCPGARMRFKKTEVCQTCSKIKNVCQTCLLDLEYGLPIQVRDAALNIKD--DMPKSDVNKEFYTQNMEKQLANSEGAGALGKAQAPSDL---LLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHDKPTDPDDPLADQNIKDRFYGNNDPVADKLLKRASQMPKLEAPEDRLVTTLYVGGLGDKVAEKDLRDHFYQFGEIRNINVVQKQQCAFVQFTSRSAAELAADRSFQKLIIKGRRLNIKWGKSQAQQGLMG 323          
BLAST of mRNA_C-linearis_contig7.14582.1 vs. uniprot
Match: A0A210PID5_MIZYE (Pre-mRNA-splicing factor RBM22 n=2 Tax=Pectinidae TaxID=6566 RepID=A0A210PID5_MIZYE)

HSP 1 Score: 351 bits (900), Expect = 4.030e-113
Identity = 170/316 (53.80%), Postives = 223/316 (70.57%), Query Frame = 0
Query:    9 KGAN--NKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKICERPYTVFRWKAGTEGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRDKFLAEEDRLEVPGSDANREFMTQMHEKQLAEGGNPYANKPLNQK------LLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMSKQDELPKLEPPEDEGISSLWLGNMSADIIPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEVAAEQLYKCLVIKGRLLRLNWATRSEESGTSGFNGPE 316
            KGAN  N++ WEESDFPI+C+TCLGDNPY+RM KE +GK CKIC RP+TVFRW  G   R K T++CQTC+K+KN CQTC+LDL+YGLPV+VRD  L  +D +  P SD N+E+ TQ  E ++A G    A   L +       LL++AR+TPYYKRN+PH CSF+ KGEC RG +CP+ H+ PTD  DPLA QNI+DRFYG +DPVA K+M++   +PKL+ PED+ I++L++GN+   I   +LRD FY FGE+RSI I   +  AFVQFTTRQAAE A E+ +  L++ GR L + W     + G +  +G E
Sbjct:    5 KGANTYNRQNWEESDFPILCQTCLGDNPYIRMMKEKYGKECKICARPFTVFRWCPGARMRFKKTEVCQTCSKIKNVCQTCLLDLEYGLPVQVRDAALKIQDNM--PKSDVNKEYYTQNMENEIANGDGTVAPGQLGKAQTPSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHDKPTDPDDPLADQNIKDRFYGMNDPVADKLMNRYTNMPKLDAPEDKAITTLYVGNLGDKIGETELRDHFYQFGEIRSINIASKQQCAFVQFTTRQAAENATEKSFNKLIMGGRRLNIKWGKSQAQMGVTKKDGEE 318          
BLAST of mRNA_C-linearis_contig7.14582.1 vs. uniprot
Match: A0A1S3HN76_LINUN (Pre-mRNA-splicing factor RBM22 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HN76_LINUN)

HSP 1 Score: 348 bits (892), Expect = 5.250e-113
Identity = 165/300 (55.00%), Postives = 217/300 (72.33%), Query Frame = 0
Query:    9 KGAN--NKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKICERPYTVFRWKAGTEGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRDKFLAEEDRLEVPGSDANREFMTQMHEKQLAEGGNPYANKPLNQK------LLRMARSTPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRFYGQDDPVAAKMMSKQDELPKLEPPEDEGISSLWLGNMSADIIPEDLRDAFYSFGELRSIRIVPGKDFAFVQFTTRQAAEVAAEQLYKCLVIKGRLLRLNW 300
            K AN  N++ WEE+DFPI+C+TCLGDNPY+RMTKE +GK CKIC RP+TVFRW  G   R K T++CQTC+KLKN CQTC+LDL+YGLPV+VRD  L  +D +  P SD N+EF  Q  E+ LA   +  A   L +       LL++AR+TPYYKRN+PH CSF+ KGEC RG +CP+ HE PTD  DPLA QNI+DRFYG +DPVA K++ +   +PKLEPPED+ +++L++GN+   +  +DLRD FY FGE+RS+ +V  +  AFVQFT R+++E AAE  +  L+I GR L + W
Sbjct:    5 KSANTYNRQNWEEADFPILCQTCLGDNPYIRMTKEKYGKECKICVRPFTVFRWCPGKGARFKKTEVCQTCSKLKNICQTCLLDLEYGLPVQVRDAALKLQDSM--PKSDVNKEFFAQNAERDLANSDSSLAYGALGKSQSPSDMLLKLARTTPYYKRNRPHICSFWVKGECKRGEECPYRHEKPTDPDDPLADQNIKDRFYGVNDPVADKLIKRYATMPKLEPPEDKSVTTLYVGNLGDKVTEKDLRDHFYQFGEIRSVTMVSRQQCAFVQFTKRESSEAAAESTFNKLIINGRRLTIKW 302          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14582.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXF1_ECTSI1.560e-24581.40Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S3YHN5_HETAK2.600e-14161.99Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6H5K028_9PHAE8.210e-13675.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YZV2_9STRA3.590e-13260.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K8YS72_NANGC3.530e-12656.44Pre-mRNA-splicing factor RBM22/SLT11 n=3 Tax=Monod... [more]
A0A7J7K4C1_BUGNE2.620e-11656.21Pre-mRNA-splicing factor RBM22 n=1 Tax=Bugula neri... [more]
V4B970_LOTGI1.190e-11354.85Pre-mRNA-splicing factor RBM22 n=1 Tax=Lottia giga... [more]
UPI001425A43C2.760e-11354.66pre-mRNA-splicing factor RBM22-like n=1 Tax=Anneis... [more]
A0A210PID5_MIZYE4.030e-11353.80Pre-mRNA-splicing factor RBM22 n=2 Tax=Pectinidae ... [more]
A0A1S3HN76_LINUN5.250e-11355.00Pre-mRNA-splicing factor RBM22 n=1 Tax=Lingula ung... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 231..299
e-value: 5.0E-15
score: 65.9
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 232..296
e-value: 3.2E-10
score: 39.7
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 230..303
score: 14.863
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 157..183
e-value: 5.8E-5
score: 32.5
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 156..184
score: 13.77
IPR032297Torus domainPFAMPF16131Toruscoord: 156..191
e-value: 1.1E-6
score: 29.3
NoneNo IPR availableGENE3D4.10.1000.10coord: 148..201
e-value: 6.2E-6
score: 28.0
NoneNo IPR availablePANTHERPTHR14089:SF6PRE-MRNA-SPLICING FACTOR RBM22coord: 9..494
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 208..310
e-value: 1.0E-15
score: 59.7
IPR039171Pre-mRNA-splicing factor Cwc2/Slt11PANTHERPTHR14089CELL CYCLE CONTROL PROTEINcoord: 9..494
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 161..182
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 223..302

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:3508117..3513479 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14582.1mRNA_C-linearis_contig7.14582.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 3507979..3514134 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14582.1 ID=prot_C-linearis_contig7.14582.1|Name=mRNA_C-linearis_contig7.14582.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=519bp
MGERGYQLKGANNKKAWEESDFPIVCETCLGDNPYVRMTKEPHGKACKIC
ERPYTVFRWKAGTEGRIKSTQLCQTCAKLKNACQTCVLDLQYGLPVEVRD
KFLAEEDRLEVPGSDANREFMTQMHEKQLAEGGNPYANKPLNQKLLRMAR
STPYYKRNQPHKCSFYAKGECNRGAKCPFLHEMPTDRADPLAHQNIRDRF
YGQDDPVAAKMMSKQDELPKLEPPEDEGISSLWLGNMSADIIPEDLRDAF
YSFGELRSIRIVPGKDFAFVQFTTRQAAEVAAEQLYKCLVIKGRLLRLNW
ATRSEESGTSGFNGPEGGCRRIGNGDRKKQQAEGGGDKDAAGGAGGGNAE
EGEGSSKPGGGDEKQAAAAVTAGPYQPVPLPPVPGLPAGAPVAPVPHMPP
MPHLQGYQPPPPSAYPQQYAPPPGPRPPLYNGGGRGQHHHARGPPIPSYG
PVRGGGGGAMYGGGGGRRPPPGPPPGPPPAPYYASMDPHRLGAQPARPLL
PTPAGAAAAAPGGGSAGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR000571Znf_CCCH
IPR032297Torus
IPR012677Nucleotide-bd_a/b_plait_sf
IPR039171Cwc2/Slt11
IPR036855Znf_CCCH_sf
IPR035979RBD_domain_sf