prot_C-linearis_contig7.14542.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14542.1
Unique Nameprot_C-linearis_contig7.14542.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length401
Homology
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BLAST of mRNA_C-linearis_contig7.14542.1 vs. uniprot
Match: D7G1V8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V8_ECTSI)

HSP 1 Score: 216 bits (551), Expect = 1.440e-65
Identity = 121/201 (60.20%), Postives = 147/201 (73.13%), Query Frame = 0 
Query:  131 LTDPDVLREYRKNWTVEKDCVRPVRFRTDAVTSSNTGVPARFRVTETRKLPGAPKAAERLRQKVLESGPMGVVRLRQALQQRVQQADVPAGAGDGSCQRLVQASNLMDGLIDAGLTTLSALDAKKVIE-CFGTGENANGSSGGGATVSDVFEGLGLGSPTMDEKQSRAVTDAFRELDEDGSGVLRAGNLRRRYDAAAASLR 330
            +TDPD LREYR+NWTVE DCVRPVRF+TDAVTS+NTGVPARFR++E RKLPG PKA ERLR K LE G MG+VRL QALQ+R+Q         D +  RL+Q ++LM+GL  AGLT L+A DAKKVIE C   G++       GA+++DV E L  G P  D+ + +AV  AFRELDE GSG++ A  L+RRYDAAAAS R
Sbjct:    1 MTDPDKLREYRRNWTVEDDCVRPVRFKTDAVTSANTGVPARFRMSEMRKLPGTPKAVERLRAKALEGGQMGIVRLHQALQRRLQANHTEPRTSDVAQHRLLQPNDLMEGLSGAGLTPLTAFDAKKVIEFCTKGGDD-------GASITDVLEELRFGGPVDDDYRVQAVKGAFRELDEGGSGLISARGLKRRYDAAAASTR 194
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BLAST of mRNA_C-linearis_contig7.14542.1 vs. uniprot
Match: A0A482S5Q3_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S5Q3_9ARCH)

HSP 1 Score: 75.5 bits (184), Expect = 7.350e-12
Identity = 55/160 (34.38%), Postives = 76/160 (47.50%), Query Frame = 0 
Query:    8 GSNSLRGGKKHYGPKTKCGNWVE-LDKEPGQTLPAGFPHAMYKTDAHQQMLEGVFQRPKRFGAGLPPA-EDTKIDYSRVINYDKQQRDAKWAAITTTEFVAPGDGSEKARQLSKEFAPSFKLTGGLTDPDVLREYRKNWTVEKDCVRPVRFRTDAVTSSN 165
            G N LRGG K + PKT  G W++ L    G     GF  + Y+T+A  Q    + Q    FGAGLP   + T+ D        K   +  WA  T T+ +     S+     SK++     L   +   D L EYR+NWT+E D +R VRF T+   SS+
Sbjct:   12 GQNGLRGGIKTFAPKTITGPWLDALGGTAGYKR--GFTTSEYETEAQHQQKGALLQNEPEFGAGLPDELQLTRPDSPFKYTVSKYNNENVWA--TNTKLM-----SQVLLTQSKDYEVPTALKPRMP-ADKLEEYRRNWTIESDAMRDVRFATETRISSS 161
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14542.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1V8_ECTSI1.440e-6560.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A482S5Q3_9ARCH7.350e-1234.38Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 292..398
e-value: 8.9E-6
score: 28.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:3025952..3029912 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14542.1mRNA_C-linearis_contig7.14542.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 3025952..3029912 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14542.1 ID=prot_C-linearis_contig7.14542.1|Name=mRNA_C-linearis_contig7.14542.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=401bp
MLGLQQGGSNSLRGGKKHYGPKTKCGNWVELDKEPGQTLPAGFPHAMYKT
DAHQQMLEGVFQRPKRFGAGLPPAEDTKIDYSRVINYDKQQRDAKWAAIT
TTEFVAPGDGSEKARQLSKEFAPSFKLTGGLTDPDVLREYRKNWTVEKDC
VRPVRFRTDAVTSSNTGVPARFRVTETRKLPGAPKAAERLRQKVLESGPM
GVVRLRQALQQRVQQADVPAGAGDGSCQRLVQASNLMDGLIDAGLTTLSA
LDAKKVIECFGTGENANGSSGGGATVSDVFEGLGLGSPTMDEKQSRAVTD
AFRELDEDGSGVLRAGNLRRRYDAAAASLRGAMAETDAGTGSSCPAQVAR
KALLNNFSLHQDAGEDGMTSAGFEGFMADASWGAQSDSDFDAVLRALVGK
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