prot_C-linearis_contig7.14527.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14527.1
Unique Nameprot_C-linearis_contig7.14527.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length170
Homology
BLAST of mRNA_C-linearis_contig7.14527.1 vs. uniprot
Match: D7G1U2_ECTSI (Glycine cleavage system H protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1U2_ECTSI)

HSP 1 Score: 256 bits (654), Expect = 4.520e-85
Identity = 132/170 (77.65%), Postives = 148/170 (87.06%), Query Frame = 0
Query:    1 MASVAVSRFGGAVRSSGAAMRAMRTMAGPSP-LARAGWIAGG-GNKRCMSTVYSESHEYLTKDGDTGKVGITAFAAKALGDIVFVDLPEVGDAFEAGESFGSVESVKAASDVYAPVSGEVLEINEGLTDTPGILNEDPMGKGWFMKIKITGDVPDTLLDSAAYEALCEES 168
            MASVAV+RF GA+RS GAA+R MR   GPSP LAR GW+A G GNKRCMSTVY+ESHEYLT +GDT KVGITAFAAKALGD+VFVDLPEVGD  EAG+SFGSVESVKAASDVY+P SGEVLE+NE LT++PGILNEDPMGKGWF+KIK+T   PDTL+D AAYE  CE+S
Sbjct:    1 MASVAVARFSGALRS-GAAVRTMRAFTGPSPSLARTGWLAAGAGNKRCMSTVYAESHEYLTVEGDTAKVGITAFAAKALGDVVFVDLPEVGDELEAGDSFGSVESVKAASDVYSPASGEVLEVNEALTESPGILNEDPMGKGWFIKIKMTEPAPDTLMDPAAYETHCEDS 169          
BLAST of mRNA_C-linearis_contig7.14527.1 vs. uniprot
Match: A0A1V9ZWQ1_9STRA (Glycine cleavage system H protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWQ1_9STRA)

HSP 1 Score: 152 bits (384), Expect = 2.040e-44
Identity = 73/124 (58.87%), Postives = 91/124 (73.39%), Query Frame = 0
Query:   44 KRCMSTVYSESHEYLTKDGDTGKVGITAFAAKALGDIVFVDLPEVGDAFEAGESFGSVESVKAASDVYAPVSGEVLEINEGLTDTPGILNEDPMGKGWFMKIKITGDVPDT-LLDSAAYEALCE 166
            +R  ST Y+  HEYLT  GD G +GIT FA  ALGD+V+VDLP++G+ F  G+SFGSVESVKAASDVY PVSGEV+ INE L D+P ++NE P+  GWF+KIK++     T LLD  AY+  CE
Sbjct:   14 RRAFSTKYTPQHEYLTIKGDEGTIGITDFAQNALGDVVYVDLPKIGEKFSKGDSFGSVESVKAASDVYVPVSGEVIAINENLVDSPNLVNESPLEDGWFIKIKLSDAAEATELLDEEAYKTHCE 137          
BLAST of mRNA_C-linearis_contig7.14527.1 vs. uniprot
Match: A0A7S2WUU3_9STRA (Glycine cleavage system H protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUU3_9STRA)

HSP 1 Score: 153 bits (386), Expect = 2.630e-44
Identity = 73/127 (57.48%), Postives = 96/127 (75.59%), Query Frame = 0
Query:   41 GGNKRCMSTVYSESHEYLTKDGDTGKVGITAFAAKALGDIVFVDLPEVGDAFEAGESFGSVESVKAASDVYAPVSGEVLEINEGLTDTPGILNEDPMGKGWFMKIKITGDVP-DTLLDSAAYEALCE 166
            GG  R  ST ++ESHEY+  DGD G +GITA AA+ALGDIV+VDLP+ G  +E  ESFGSVESVKAASDVY PV+GEV+E+NE L+D+P ++NE P+  GWF+KIK++     + L+D  AY+  C+
Sbjct:   44 GGLARPFSTYFAESHEYIKMDGDVGTIGITAHAAEALGDIVYVDLPDEGSDYEQKESFGSVESVKAASDVYVPVAGEVVEVNEELSDSPSLVNESPLEDGWFVKIKVSDKSQLEGLMDEGAYKTFCD 170          
BLAST of mRNA_C-linearis_contig7.14527.1 vs. uniprot
Match: A0A7S2BEF1_9STRA (Glycine cleavage system H protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BEF1_9STRA)

HSP 1 Score: 151 bits (382), Expect = 9.400e-44
Identity = 82/152 (53.95%), Postives = 103/152 (67.76%), Query Frame = 0
Query:   19 AMRAMRTMAGPSPLARAGWIAGGGNKRC--MSTVYSESHEYLTKDGDTGKVGITAFAAKALGDIVFVDLPEVGDAFEAGESFGSVESVKAASDVYAPVSGEVLEINEGLTDTPGILNEDPMGKGWFMKIKITGDVP-DTLLDSAAYEALCEE 167
            A  A R+ A  +P +R   I       C  +ST Y+ESHEY+  +GD G VGITA AA ALGDIVFVDLP+VG  F+  +SFG+VESVKAASDVY+P+ GEV+E+NE L D P  +N+ PM  GWFMKIK++     + L+D AAYE  C E
Sbjct:   14 AANAARSFALSAPASRGATIRSLPRTFCRPLSTYYAESHEYVKVEGDIGTVGITAHAADALGDIVFVDLPDVGSEFKQTDSFGTVESVKAASDVYSPIDGEVVEVNEVLEDEPETVNDSPMEHGWFMKIKMSDSSQLEGLMDDAAYEKFCVE 165          
BLAST of mRNA_C-linearis_contig7.14527.1 vs. uniprot
Match: A0A6G0XLN1_9STRA (Glycine cleavage system H protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XLN1_9STRA)

HSP 1 Score: 148 bits (374), Expect = 8.070e-43
Identity = 71/127 (55.91%), Postives = 92/127 (72.44%), Query Frame = 0
Query:   44 KRCMSTVYSESHEYLTKDGDTGKVGITAFAAKALGDIVFVDLPEVGDAFEAGESFGSVESVKAASDVYAPVSGEVLEINEGLTDTPGILNEDPMGKGWFMKIKI-TGDVPDTLLDSAAYEALCEESK 169
            +RC ST Y+ SHEYLT +G+ G +GIT FA  ALGD+V+V+LP VGD    GE FGSVESVKAASD+YAP SG+V+EINE L+D P ++NE P   GWF+KI++   D    +LD AAY+  C  ++
Sbjct:   20 RRCFSTKYTPSHEYLTLNGNVGTIGITDFAQNALGDVVYVELPAVGDQVTKGEVFGSVESVKAASDIYAPASGKVVEINEKLSDEPNLVNEGPTTTGWFIKIELDNADETTDMLDEAAYQEHCNNAE 146          
BLAST of mRNA_C-linearis_contig7.14527.1 vs. uniprot
Match: A0A836CGJ1_9STRA (Glycine cleavage system H protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGJ1_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.360e-42
Identity = 73/128 (57.03%), Postives = 96/128 (75.00%), Query Frame = 0
Query:   44 KRCMSTVYSESHEYLTKDGDTGKVGITAFAAKALGDIVFVDLPEVGDAFEAGESFGSVESVKAASDVYAPVSGEVLEINEGLTDTPGILNEDPMGKGWFMKIKIT--GDVPDTLLDSAAYEALCEESK 169
            +R  S  ++ESHEY+  DGD G +GIT FAA  LG++VFV+LPEVG  F+  +SFGSVESVKAASDVY PV GE+  +NE L+++  ++N DPMG GWF KIKI   G++  +L+D AAY+A CE+SK
Sbjct:   37 RRWASYHFAESHEYVKVDGDVGTIGITQFAADNLGEVVFVELPEVGATFDKTDSFGSVESVKAASDVYMPVGGEITSVNEELSESQELVNNDPMGDGWFAKIKIADKGELA-SLMDEAAYKAFCEDSK 163          
BLAST of mRNA_C-linearis_contig7.14527.1 vs. uniprot
Match: A0A833L5E0_9HYPH (Glycine cleavage system H protein n=1 Tax=Beijerinckiaceae bacterium TaxID=1978229 RepID=A0A833L5E0_9HYPH)

HSP 1 Score: 145 bits (365), Expect = 8.660e-42
Identity = 72/122 (59.02%), Postives = 87/122 (71.31%), Query Frame = 0
Query:   47 MSTVYSESHEYLTKDGDTGKVGITAFAAKALGDIVFVDLPEVGDAFEAGESFGSVESVKAASDVYAPVSGEVLEINEGLTDTPGILNEDPMGKGWFMKIKITGDVP-DTLLDSAAYEALCEE 167
            M+T Y++ HEYL  DGDT  VGIT +A   LGD+VFV+LP+VG +F+ G     VESVKAASDVYAPVSGE++ +N  L DTP  +NEDP GKGWFMKIK+        LLD AAY+AL  E
Sbjct:    1 MTTYYTKDHEYLRVDGDTATVGITNYAQAQLGDVVFVELPDVGKSFKQGAEAAVVESVKAASDVYAPVSGEIVAVNTSLPDTPATINEDPEGKGWFMKIKLANKAELAELLDEAAYKALIGE 122          
BLAST of mRNA_C-linearis_contig7.14527.1 vs. uniprot
Match: UPI001FF679ED (glycine cleavage system protein GcvH n=1 Tax=Amycolatopsis sp. WQ 127309 TaxID=2932773 RepID=UPI001FF679ED)

HSP 1 Score: 145 bits (365), Expect = 9.500e-42
Identity = 67/118 (56.78%), Postives = 92/118 (77.97%), Query Frame = 0
Query:   51 YSESHEYLTKDGDTGKVGITAFAAKALGDIVFVDLPEVGDAFEAGESFGSVESVKAASDVYAPVSGEVLEINEGLTDTPGILNEDPMGKGWFMKIKITGDVPDTLLDSAAYEALCEES 168
            Y++ HE+L  +GD   VGITAFAA++LGDIVFV LP+VG    +GE FG VES K+ S++YAPVSGEV+E+N   +DTP ++N DP  +GW +K++++GDVP+ LLD+AAY AL +ES
Sbjct:    9 YTKEHEWLNVEGDVATVGITAFAAESLGDIVFVQLPDVGATITSGEVFGEVESTKSVSELYAPVSGEVVEVNGTTSDTPEVINSDPYAEGWLLKVRLSGDVPE-LLDAAAYAALTQES 125          
BLAST of mRNA_C-linearis_contig7.14527.1 vs. uniprot
Match: UPI001E5D7D79 (glycine cleavage system protein GcvH n=1 Tax=Pseudodesulfovibrio sp. SF6 TaxID=2810563 RepID=UPI001E5D7D79)

HSP 1 Score: 145 bits (365), Expect = 9.800e-42
Identity = 67/117 (57.26%), Postives = 90/117 (76.92%), Query Frame = 0
Query:   50 VYSESHEYLTKDGDTGKVGITAFAAKALGDIVFVDLPEVGDAFEAGESFGSVESVKAASDVYAPVSGEVLEINEGLTDTPGILNEDPMGKGWFMKIKITGDVPDTLLDSAAYEALCE 166
            +YS+SHE++  +GD   VGIT FA + LGD+ F++LPEVGD FEAG   GSVESVKAAS++YAPV+GE++E+NE L D P ++NE+P G GW +K KI G+ P+ LLD+ AY A+ E
Sbjct:    7 LYSKSHEWVMVEGDIATVGITHFAQEQLGDMTFIELPEVGDTFEAGSEMGSVESVKAASEIYAPVTGEIVEVNEALEDAPEMVNEEPYGDGWMLKFKIKGE-PEGLLDAEAYTAVVE 122          
BLAST of mRNA_C-linearis_contig7.14527.1 vs. uniprot
Match: A0A1V9YH61_9STRA (Glycine cleavage system H protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YH61_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.130e-41
Identity = 73/124 (58.87%), Postives = 87/124 (70.16%), Query Frame = 0
Query:   44 KRCMSTVYSESHEYLTKDGDTGKVGITAFAAKALGDIVFVDLPEVGDAFEAGESFGSVESVKAASDVYAPVSGEVLEINEGLTDTPGILNEDPMGKGWFMKIKITG-DVPDTLLDSAAYEALCE 166
            +R  +T ++  HEYL  +G    VGIT FA  ALGDIV+VDLP VG  F  G+SFGSVESVKAASDVYAP SGEV+ INE LT +P ++NE P+  GWFMKIK+T     + LLD AAY   CE
Sbjct:   15 RRAFATKFTPEHEYLNINGGEATVGITDFAQNALGDIVYVDLPSVGQKFAKGDSFGSVESVKAASDVYAPASGEVIAINEALTSSPELVNESPLVDGWFMKIKLTNPSETEELLDEAAYATHCE 138          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14527.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1U2_ECTSI4.520e-8577.65Glycine cleavage system H protein n=2 Tax=Ectocarp... [more]
A0A1V9ZWQ1_9STRA2.040e-4458.87Glycine cleavage system H protein n=1 Tax=Thrausto... [more]
A0A7S2WUU3_9STRA2.630e-4457.48Glycine cleavage system H protein n=1 Tax=Rhizochr... [more]
A0A7S2BEF1_9STRA9.400e-4453.95Glycine cleavage system H protein n=1 Tax=Dictyoch... [more]
A0A6G0XLN1_9STRA8.070e-4355.91Glycine cleavage system H protein n=1 Tax=Aphanomy... [more]
A0A836CGJ1_9STRA1.360e-4257.03Glycine cleavage system H protein n=1 Tax=Tribonem... [more]
A0A833L5E0_9HYPH8.660e-4259.02Glycine cleavage system H protein n=1 Tax=Beijerin... [more]
UPI001FF679ED9.500e-4256.78glycine cleavage system protein GcvH n=1 Tax=Amyco... [more]
UPI001E5D7D799.800e-4257.26glycine cleavage system protein GcvH n=1 Tax=Pseud... [more]
A0A1V9YH61_9STRA1.130e-4158.87Glycine cleavage system H protein n=1 Tax=Achlya h... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR033753Glycine cleavage system H-protein/SimiatePFAMPF01597GCV_Hcoord: 51..167
e-value: 5.5E-40
score: 136.1
NoneNo IPR availableGENE3D2.40.50.100coord: 47..169
e-value: 4.6E-44
score: 151.3
IPR017453Glycine cleavage system H-protein, subgroupTIGRFAMTIGR00527TIGR00527coord: 50..167
e-value: 2.7E-45
score: 151.5
IPR002930Glycine cleavage system H-proteinPANTHERPTHR11715GLYCINE CLEAVAGE SYSTEM H PROTEINcoord: 44..168
IPR002930Glycine cleavage system H-proteinHAMAPMF_00272GcvHcoord: 47..166
score: 34.88
IPR0030162-oxo acid dehydrogenase, lipoyl-binding sitePROSITEPS00189LIPOYLcoord: 89..118
IPR000089Biotin/lipoyl attachmentPROSITEPS50968BIOTINYL_LIPOYLcoord: 64..146
score: 30.208
IPR011053Single hybrid motifSUPERFAMILY51230Single hybrid motifcoord: 49..167

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:2896992..2901292 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14527.1mRNA_C-linearis_contig7.14527.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 2895313..2901292 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14527.1 ID=prot_C-linearis_contig7.14527.1|Name=mRNA_C-linearis_contig7.14527.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=170bp
MASVAVSRFGGAVRSSGAAMRAMRTMAGPSPLARAGWIAGGGNKRCMSTV
YSESHEYLTKDGDTGKVGITAFAAKALGDIVFVDLPEVGDAFEAGESFGS
VESVKAASDVYAPVSGEVLEINEGLTDTPGILNEDPMGKGWFMKIKITGD
VPDTLLDSAAYEALCEESK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR033753GCV_H/Fam206
IPR017453GCV_H_sub
IPR002930GCV_H
IPR0030162-oxoA_DH_lipoyl-BS
IPR000089Biotin_lipoyl
IPR011053Single_hybrid_motif