prot_C-linearis_contig7.14526.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14526.1
Unique Nameprot_C-linearis_contig7.14526.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length334
Homology
BLAST of mRNA_C-linearis_contig7.14526.1 vs. uniprot
Match: D7G1U0_ECTSI (Altered inheritance of mitochondria protein 24, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1U0_ECTSI)

HSP 1 Score: 433 bits (1114), Expect = 9.020e-149
Identity = 221/229 (96.51%), Postives = 226/229 (98.69%), Query Frame = 0
Query:   94 MASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSVFRRVITGQNMFVTDYVNRGDRTSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMMAGFFGGEGFVLQRLTGQGDAFVKASGPLIQRELTEGETLRVSSGSVVAFSTSVQYDVQTVPGFKNVVFGGEGLFITKLTGPGTVFLQGLPFDRMVDQIARRIPGGRGG 322
            MASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASS+FRRVITGQNMFVTDYVNRGD + KVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMMAGFFGGEGFVLQRLTG+GDAFVKASGPLIQREL+EGETLRVSSGSVVAFSTSVQYDVQT+PGFKNVVFGGEGLFITKL GPGTVFLQGLPFDRMVDQIARRIPGGRGG
Sbjct:    1 MASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYVNRGDASGKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMMAGFFGGEGFVLQRLTGKGDAFVKASGPLIQRELSEGETLRVSSGSVVAFSTSVQYDVQTIPGFKNVVFGGEGLFITKLAGPGTVFLQGLPFDRMVDQIARRIPGGRGG 229          
BLAST of mRNA_C-linearis_contig7.14526.1 vs. uniprot
Match: A0A7S2WLF3_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WLF3_9STRA)

HSP 1 Score: 309 bits (791), Expect = 4.120e-101
Identity = 152/259 (58.69%), Postives = 203/259 (78.38%), Query Frame = 0
Query:   78 VADQDHLALAKPLDFDMASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSVFRRVITGQNMFVTDYVNRGDRTSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMMA-GFFGGEGFVLQRLTGQGDAFVKASGPLIQRELTEGETLRVSSGSVVAFSTSVQYDVQTVPGFKNVVFGGEGLFITKLTGPGTVFLQGLPFDRMVDQIARRIPGGRGGGM-MPIPLGMGGG 334
            V   D +     +DF+ AS++EG +SQ+VT  LEPGQV+RAE+G +++M DG+EM+T+TGGG  + F+R +TGQN+F++DY  +GDR   V LGTD PSKI+RL L  + G+++CQ+GA L  SHT+DI+TEFTK  + GFFGGEGFVLQ L G+GD FVKA G +I++EL  GE LR+SSGS+VAFS +V+YD+Q +PGFKNV+FGGEGLF+T LTGPGT++LQG+P  RM+ +IARR+P G G G+ +PIP GMG G
Sbjct:   37 VVSSDGVVATHAIDFNTASRIEGSDSQIVTVRLEPGQVLRAESGGMMYMTDGVEMNTSTGGGVGAGFKRFLTGQNVFISDYTYKGDRFGIVALGTDFPSKIMRLSLPEWDGKIVCQKGALLCASHTVDIETEFTKKFSTGFFGGEGFVLQALLGEGDVFVKAGGSIIKKELNPGEQLRISSGSLVAFSQTVEYDIQMMPGFKNVLFGGEGLFVTTLTGPGTIWLQGMPPQRMISEIARRVPSGGGLGLAIPIP-GMGSG 294          
BLAST of mRNA_C-linearis_contig7.14526.1 vs. uniprot
Match: A0A7S4J9C2_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J9C2_9STRA)

HSP 1 Score: 302 bits (773), Expect = 1.340e-97
Identity = 168/319 (52.66%), Postives = 226/319 (70.85%), Query Frame = 0
Query:   26 SPKHVGHLYPTALSAAR----FAPTATAAFVHRSSSSKPKPSTGSDIATGGSSAP--AVADQDHLALAKPLDFDMASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSVFRRVITGQNMFVTDYVNRGD--RTSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMM-AGFFGGEGFVLQRLTGQGDAFVKASGPLIQRELTEGETLRVSSGSVVAFSTSVQYDVQTVPGFKNVVFGGEGLFITKLTGPGTVFLQGLPFDRMVDQIARRIPGGRGGGMMPIPLG-MGGG 334
            S  H+  L+P  L+A+     F P  T     R       P + + +A GG + P  A A  D + +A P+DFD++SKVEG+ESQ+VT  ++PGQ++RAE+G +++M  G+ M+T TGGG S+ F+R++TGQN+F++DY   G+   T  V LGTD PSKI+RL +  YGG+++ Q+GA L  +HTIDI+ EF K   AGFFGGEGFVLQ LTG GD F+KA G LI+REL+ GE LR+SSG +VAFS  V +D+QT+PGFKNV+FGGEGLF+T LTGPGTV+LQG P  RM+ +IARR+P G G G+  +P+G MGGG
Sbjct:   37 STSHLSVLHPPLLTASAQLGCFDPARTKEPFQRRRYFSSTPDSDTPVAVGGENLPEGAKASSDGV-VAVPIDFDVSSKVEGKESQIVTVAIKPGQILRAESGAMMYMTQGVSMNTTTGGGLSAGFKRMLTGQNVFISDYSYEGEPGTTGLVALGTDFPSKIIRLNVDQYGGKIVAQKGALLCATHTIDIEMEFAKKFSAGFFGGEGFVLQALTGDGDVFLKAGGTLIRRELSAGEQLRISSGCLVAFSDGVDFDIQTMPGFKNVMFGGEGLFVTTLTGPGTVWLQGQPPQRMISEIARRVPSGGGIGLA-VPIGGMGGG 353          
BLAST of mRNA_C-linearis_contig7.14526.1 vs. uniprot
Match: A0A7S4QQY9_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QQY9_9STRA)

HSP 1 Score: 300 bits (768), Expect = 6.490e-97
Identity = 153/255 (60.00%), Postives = 197/255 (77.25%), Query Frame = 0
Query:   82 DHLALAKPLDFDMASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSVFRRVITGQNMFVTDYVNRGDRTSK--VGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMM-AGFFGGEGFVLQRLTGQGDAFVKASGPLIQRELTEGETLRVSSGSVVAFSTSVQYDVQTVPGFKNVVFGGEGLFITKLTGPGTVFLQGLPFDRMVDQIARRIPGGRGGGMMPIPLGMGG 333
            D +    P++FD+ASK+EG+ESQ+VT  +EPGQV+RAE+G L++M DGIEM+T +GGG S+ F+R++TGQN+F++DY   G+  ++  V LGTD PSKI+RL    YGG+++CQ+GA L  SHTIDI+ EF K   AGFFGGEGFVLQ LTG GD FVKA G +I++EL  GE LR+SSG +V FS  V +DVQ +PGFKNV+FGGEGLF+T LTGPGTV+LQG P  RM+ +IARR+P G  G  +PIP GMGG
Sbjct:   98 DGVVATHPINFDIASKIEGKESQIVTVAIEPGQVLRAESGALMYMTDGIEMNTTSGGGMSAGFKRLLTGQNVFISDYTYTGESGTRGLVALGTDFPSKIIRLNPNQYGGKIVCQKGALLCASHTIDIEMEFAKKFTAGFFGGEGFVLQALTGDGDVFVKAGGTMIRKELEAGEQLRISSGCLVCFSQGVDFDVQMMPGFKNVLFGGEGLFVTTLTGPGTVWLQGQPPQRMISEIARRVPSGGIGLAVPIP-GMGG 351          
BLAST of mRNA_C-linearis_contig7.14526.1 vs. uniprot
Match: A0A4D9D418_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D418_9STRA)

HSP 1 Score: 299 bits (766), Expect = 1.840e-96
Identity = 148/242 (61.16%), Postives = 194/242 (80.17%), Query Frame = 0
Query:   81 QDHLALAKPLDFDMASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSVFRRVITGQNMFVTDYVNRGDRTSK--VGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMM-AGFFGGEGFVLQRLTGQGDAFVKASGPLIQRELTEGETLRVSSGSVVAFSTSVQYDVQTVPGFKNVVFGGEGLFITKLTGPGTVFLQGLPFDRMVDQIARRIPGG 319
            +D  ALAKP+DFD+AS+VEG E+Q+V  +LEPGQV+RAE G+L++M DG+E++T+ GGG S+  +R +TG+NMF++D+   G   S   V LGT+ PSKI+R+ LA YGG +ICQ+GAFL G+H   ++ EFT+   +GFFGGEGFVLQRLTG GDAF+KA G LI+REL+EGETLRV+SGS+V F+ SVQYDV+ + G KNV+FGGEGLF+T LTGPG+VFLQ +PFDR+V  IA R+P G
Sbjct:   17 EDQTALAKPIDFDVASRVEGAETQIVVVDLEPGQVLRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGENMFISDFKYHGPEGSSGTVALGTEFPSKIIRVTLADYGGSLICQKGAFLCGTHLTGMEMEFTRSFKSGFFGGEGFVLQRLTGGGDAFIKAGGALIRRELSEGETLRVTSGSLVGFAPSVQYDVEMLKGVKNVMFGGEGLFVTTLTGPGSVFLQSMPFDRVVASIASRVPRG 258          
BLAST of mRNA_C-linearis_contig7.14526.1 vs. uniprot
Match: A0A7S2GIV3_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GIV3_9STRA)

HSP 1 Score: 297 bits (760), Expect = 1.960e-96
Identity = 153/248 (61.69%), Postives = 195/248 (78.63%), Query Frame = 0
Query:   88 KPLDFDMASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSVFRRVITGQNMFVTDYVNRGDRTSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMMA-GFFGGEGFVLQRLTGQGDAFVKASGPLIQRELTEGETLRVSSGSVVAFSTSVQYDVQTVPGFKNVVFGGEGLFITKLTGPGTVFLQGLPFDRMVDQIARRIPGGRGGGMMPIPLGMGGG 334
            KP++FD A +VEG ++Q+V  EL PGQ +RAE+GNL++M +G+EM+T   GG SS F R+++G  MF++++   G  +  V LGTDVPSKI+R+ L  YGGE+ICQ+GAFLAGS  I+I+  FTK    GFFGGEGFVLQ+L+G+GDA+VKA+G L+ ++L EGETLRV++GS+VAF  S+ YDVQ + G KNVVFGGEGLFIT LTGPGTV+LQG+ FDRMVDQIARRIP  RGGGM     GMGGG
Sbjct:   65 KPINFDAAGRVEGGDAQIVHVELLPGQTLRAESGNLIYMTEGVEMETVALGGVSSGFARLLSGGTMFLSNFEYTGSGSGTVALGTDVPSKILRMHLPNYGGEIICQKGAFLAGSDDINIEMAFTKSFTTGFFGGEGFVLQKLSGEGDAYVKATGALVTKQLEEGETLRVTAGSLVAFEASIDYDVQMMKGMKNVVFGGEGLFITTLTGPGTVYLQGMQFDRMVDQIARRIP--RGGGMPIFMGGMGGG 310          
BLAST of mRNA_C-linearis_contig7.14526.1 vs. uniprot
Match: A0A1Z5KFL0_FISSO (Altered inheritance of mitochondria protein 24, mitochondrial n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KFL0_FISSO)

HSP 1 Score: 296 bits (759), Expect = 2.360e-96
Identity = 159/299 (53.18%), Postives = 209/299 (69.90%), Query Frame = 0
Query:   37 ALSAARFAPTATAAFVHRSSSSKPKPSTGSDIATGGSSAPAVADQDHLALAKPLDFDMASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSVFRRVITGQNMFVTDYVNRGDRTSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMM-AGFFGGEGFVLQRLTGQGDAFVKASGPLIQRELTEGETLRVSSGSVVAFSTSVQYDVQTVPGFKNVVFGGEGLFITKLTGPGTVFLQGLPFDRMVDQIARRIPGGRGGGMMPIPLGMGGG 334
            A SAAR  P + A + HR+ +S+    T  D   G                +P+DFD+A+K+EG ESQ+VT EL P QV+RAE+G ++++ +G+EM+T TGGG S+ FRR++TGQN F++DY   G+   +V LGTD PSKI+RL +  YGG+++CQ+GA L  SHTID+Q EFTK   +GFFGGEGF+LQ LTG+GD F+KA G LI+R+L  GE LR+SSG +VAF++ + YDVQ V GF NV  GGEGLFIT L GPGTV+LQG P  RM+ +IARR+P G G G M   +G GGG
Sbjct:   11 ASSAARRGPVSIARYPHRTFASQTPTLTSVDGVVG----------------EPIDFDLAAKIEGNESQIVTIELRPNQVLRAESGAMMYLTEGVEMNTTTGGGLSAGFRRMMTGQNFFISDYTYTGNTVGRVALGTDFPSKILRLNVPEYGGKLVCQKGALLCASHTIDVQMEFTKSFTSGFFGGEGFILQALTGEGDVFLKAGGTLIRRDLRAGEELRISSGCLVAFTSQIDYDVQMVKGFANVFAGGEGLFITTLKGPGTVWLQGQPPQRMISEIARRVPAGGGLGFM---VGSGGG 290          
BLAST of mRNA_C-linearis_contig7.14526.1 vs. uniprot
Match: W7T4F9_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial (Fragment) n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4F9_9STRA)

HSP 1 Score: 298 bits (764), Expect = 7.100e-96
Identity = 148/242 (61.16%), Postives = 192/242 (79.34%), Query Frame = 0
Query:   81 QDHLALAKPLDFDMASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSVFRRVITGQNMFVTDYVNRGDRTSK--VGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMM-AGFFGGEGFVLQRLTGQGDAFVKASGPLIQRELTEGETLRVSSGSVVAFSTSVQYDVQTVPGFKNVVFGGEGLFITKLTGPGTVFLQGLPFDRMVDQIARRIPGG 319
            +D  ALAKP+DFD+AS+VEG E+Q+V  +LEPGQV+RAE G+L++M DG+E++T+ GGG S+  +R +TG+NMF++D+   G   S   V LGT+ PSKI+R+ LA YGG +ICQ+GAFL G+H   ++ EFT+    GFFGGEGFVLQRLTG GDAF+KA G LI+REL+EGETLRV+SGS+V F+ SVQYDV+ + G KNV+FGGEGLF+T LTGPG VFLQ +PFDR+V  IA R+P G
Sbjct:   74 EDQTALAKPIDFDVASRVEGAETQIVVVDLEPGQVLRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGENMFISDFKYHGPEGSSGTVALGTEFPSKIIRVTLADYGGSLICQKGAFLCGTHLTGMEMEFTRSFKGGFFGGEGFVLQRLTGGGDAFIKAGGALIRRELSEGETLRVTSGSLVGFAPSVQYDVEMLKGVKNVMFGGEGLFVTTLTGPGAVFLQSMPFDRVVASIASRVPRG 315          
BLAST of mRNA_C-linearis_contig7.14526.1 vs. uniprot
Match: A0A1W0A5V3_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A5V3_9STRA)

HSP 1 Score: 300 bits (767), Expect = 1.180e-95
Identity = 147/248 (59.27%), Postives = 189/248 (76.21%), Query Frame = 0
Query:   88 KPLDFDMASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSVFRRVITGQNMFVTDYVNRGDRTSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMM-AGFFGGEGFVLQRLTGQGDAFVKASGPLIQRELTEGETLRVSSGSVVAFSTSVQYDVQTVPGFKNVVFGGEGLFITKLTGPGTVFLQGLPFDRMVDQIARRIPGGRGGGMMPIPLGMGGG 334
            +P+DF  A+++EG E+Q+V  ++ P Q +R+E+G +++M DGIEMDT+T GG S    R++TGQN FVT+Y  +G  T  V +GT VPSKI+ +PL  YGG +ICQ+GAFL GSHTI I+ EFTK   AGFFGGEGFVLQRL G GDAF+ A+G LI+R L EGE  R+SSG +VAF  SV +D+ +V G KNV+F G GLF+T LTGPG V+LQGLPFDRMV +IA RIPGGRGG  + +P+G+GGG
Sbjct:  100 EPIDFKKAARIEGTETQIVHIDIGPNQKLRSESGAMIYMTDGIEMDTHTAGGISQGLTRMMTGQNFFVTEYTYKGTDTGTVAMGTSVPSKILHMPLEKYGGSLICQKGAFLCGSHTISIEMEFTKNFGAGFFGGEGFVLQRLNGPGDAFISANGALIERTLKEGEVFRISSGCLVAFEPSVHFDITSVSGVKNVLFSGTGLFVTTLTGPGRVYLQGLPFDRMVGEIASRIPGGRGGSPIIMPMGLGGG 347          
BLAST of mRNA_C-linearis_contig7.14526.1 vs. uniprot
Match: B8C800_THAPS (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C800_THAPS)

HSP 1 Score: 295 bits (756), Expect = 1.960e-95
Identity = 154/250 (61.60%), Postives = 192/250 (76.80%), Query Frame = 0
Query:   89 PLDFDMASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSVFRRVITGQNMFVTDYVNRGDRT--SKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMMA-GFFGGEGFVLQRLTGQGDAFVKASGPLIQRELTEGETLRVSSGSVVAFSTSVQYDVQTVPGFKNVVFGGEGLFITKLTGPGTVFLQGLPFDRMVDQIARRIPGGRGGGM-MPIPLGMGGG 334
            P+DFD+AS +EG+ESQ+VT  LEP QV+RAE+G +++M  G+ M+T TGGG S+ F+R +TGQN+F++DY   G       V LG+D PSKIVRL L  YGG+VICQ+GA L  SHT+DIQ EFTK  + GFFGGEGFVLQ LTG GD  VKA G LI+++L EGE+LRVSSG +V F   V+YDV  VPGFKNV+FGGEGLF+T L GPGTV+LQG+P  RM+ +IARR+P G G G+ +PIP GMGGG
Sbjct:   74 PIDFDIASSIEGKESQIVTIRLEPNQVLRAESGAMMYMTSGVSMNTTTGGGMSAGFQRFLTGQNVFISDYTYDGSNGPFGFVALGSDFPSKIVRLSLDEYGGKVICQKGALLCASHTVDIQVEFTKKFSTGFFGGEGFVLQGLTGTGDVLVKAGGTLIRKDLKEGESLRVSSGCLVGFQQGVEYDVAMVPGFKNVLFGGEGLFLTTLKGPGTVWLQGMPPQRMISEIARRVPSGGGIGLAVPIP-GMGGG 322          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14526.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1U0_ECTSI9.020e-14996.51Altered inheritance of mitochondria protein 24, mi... [more]
A0A7S2WLF3_9STRA4.120e-10158.69Altered inheritance of mitochondria protein 24, mi... [more]
A0A7S4J9C2_9STRA1.340e-9752.66Altered inheritance of mitochondria protein 24, mi... [more]
A0A7S4QQY9_9STRA6.490e-9760.00Altered inheritance of mitochondria protein 24, mi... [more]
A0A4D9D418_9STRA1.840e-9661.16Altered inheritance of mitochondria protein 24, mi... [more]
A0A7S2GIV3_9STRA1.960e-9661.69Altered inheritance of mitochondria protein 24, mi... [more]
A0A1Z5KFL0_FISSO2.360e-9653.18Altered inheritance of mitochondria protein 24, mi... [more]
W7T4F9_9STRA7.100e-9661.16Altered inheritance of mitochondria protein 24, mi... [more]
A0A1W0A5V3_9STRA1.180e-9559.27Altered inheritance of mitochondria protein 24, mi... [more]
B8C800_THAPS1.960e-9561.60Altered inheritance of mitochondria protein 24, mi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036983Mitochondrial biogenesis AIM24 superfamilyGENE3D3.60.160.10coord: 91..321
e-value: 1.3E-78
score: 265.5
IPR002838Mitochondrial biogenesis protein AIM24PFAMPF01987AIM24coord: 97..302
e-value: 4.0E-58
score: 196.5
IPR002838Mitochondrial biogenesis protein AIM24TIGRFAMTIGR00266TIGR00266coord: 98..314
e-value: 9.8E-38
score: 127.9
NoneNo IPR availablePANTHERPTHR43657FAMILY NOT NAMEDcoord: 93..320
IPR016031Tryptophan RNA-binding attenuator protein-like domain superfamilySUPERFAMILY51219TRAP-likecoord: 95..320

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:2887476..2891684 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14526.1mRNA_C-linearis_contig7.14526.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 2887400..2891684 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14526.1 ID=prot_C-linearis_contig7.14526.1|Name=mRNA_C-linearis_contig7.14526.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=334bp
MTSRGATSAARRLTLLRGSSGRLSVSPKHVGHLYPTALSAARFAPTATAA
FVHRSSSSKPKPSTGSDIATGGSSAPAVADQDHLALAKPLDFDMASKVEG
QESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSVFRRVITG
QNMFVTDYVNRGDRTSKVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAG
SHTIDIQTEFTKMMAGFFGGEGFVLQRLTGQGDAFVKASGPLIQRELTEG
ETLRVSSGSVVAFSTSVQYDVQTVPGFKNVVFGGEGLFITKLTGPGTVFL
QGLPFDRMVDQIARRIPGGRGGGMMPIPLGMGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036983AIM24_sf
IPR002838AIM24
IPR016031Trp_RNA-bd_attenuator-like_dom