prot_C-linearis_contig7.14522.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14522.1
Unique Nameprot_C-linearis_contig7.14522.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length726
Homology
BLAST of mRNA_C-linearis_contig7.14522.1 vs. uniprot
Match: D7G1T6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1T6_ECTSI)

HSP 1 Score: 667 bits (1721), Expect = 1.290e-229
Identity = 434/744 (58.33%), Postives = 492/744 (66.13%), Query Frame = 0
Query:    1 MAWRPGPEP-LGSGSCEYDERDPWTQRFISKTGDGELSLDANAMNGLETAAGAIFVELIRQQAERPNSPADSSISTWMPGYDMGRHYQQHPPAMRMDPPMAQYEPFRRTYVSDPTCIPQLRFANVPDAGADHHKREARCHWRRAGRTWSRVPRFRKGETAFTHDPSYKPPHAVVDKWYRTEAGPKNSLAGRVEESRWQSCHSMQTGRQPRKPTRSRLPWDP--KKAGPGPASYHMRDPWEVKEVCGAVPKSRMFCEPVRRPRPQTTAFTLPPAGHQDMSVVTSAA---STSACDGPSASGLGESRARPVTVTPEPSASAAVAAGVTAHYTPPCRRKNCAPRKQRSVCGGGGSTGTRHPPTKVSAGGRHRPEHQTTTHASSTARAAARGVRPPTVGPSSFARAERPTITDECRRKEESYGKKVVRLLTREGDVLVTVTRRRASAWGSSSQGPLGLRPDC------ASASAAATAPKKTKVAAAEPQSAAQQEPNKPNHDGRRAVGRHRSSPGSRNRTAGGGGEGRDAVRDANAAVRAALPAGYAVSPK--RGSTLEAQAMRLLPDDLTASLTAYREPGRAELPLVFRATSAPIVRAAPNSRAAKIIN-RRGAARADTGDVATGPGGGGGDSGTAVATNDMGEWHQE----EEARMTRIIRGAEDAVDKSSG---GGGDXXXXXGR-------KTSIRTRLPAPSDPDFASESPGGMDDKEERAQAEGNDGSCGFVSSTVWSGGET 715
            MAWRPGP   LG GS EYDERDPW QRFISKT DGELSLD NAMNGLETAAGAIFVELIRQQAERP SPADS+IS+WMPG DMGR  Q+HP AMR+DPPMAQYEPFRRTYVSDP+C+PQLRFANVPD GADH KREA  HWRR+GRTWSRVPRFRKGETAFTHDP+YKPPHAVVDKWY TEAGPK SLAGRVEESRWQSCHSMQ+GR+PRKPTRSRLP D   K   PGPASYHMRDPWEV+EVCGAVP SR+FC+PVRR  PQT+AF + P G  DMSV TSAA   S +  D  SA    E +ARP T     + S+A A    A   P    +  +  +QRS   GGG      P TK S G RH+  +     A++  RAA R      VGPSSFARAERP I DE RRKEESYGKKVVRLLT +GDVLVTVTRRRASAWG                   A   AA T  +                          AVGR R++PG    +   GG GRDA+  + +A+R   P    V P   R S+LE++A  LLPDDLTAS   YREPG++ELP++FRATSAPIVRA P+ RAA+ +   R  ARA+     + P G   +S  AV   + G W QE    E A ++R++R AE  V KSSG   GG  XXXXX         K+ +RTR+PAPS  D      GG DD  E  Q   NDGSC +VSST+WSGGET
Sbjct:    1 MAWRPGPRSSLGLGSSEYDERDPWIQRFISKTDDGELSLDVNAMNGLETAAGAIFVELIRQQAERPVSPADSTISSWMPGQDMGRQRQRHPAAMRVDPPMAQYEPFRRTYVSDPSCVPQLRFANVPDTGADHDKREASRHWRRSGRTWSRVPRFRKGETAFTHDPNYKPPHAVVDKWYMTEAGPKVSLAGRVEESRWQSCHSMQSGREPRKPTRSRLPQDQQEKPRPPGPASYHMRDPWEVREVCGAVPNSRVFCKPVRRVLPQTSAFAVAPGGSCDMSVDTSAAPPPSAAGDDENSAFRSDEPQARPATAGVAATVSSATALTGAARDLP-LHSRRVSRTQQRSARFGGG---VGRPGTKTSPG-RHQSGNNLLPPAAAAVRAA-RARPAAAVGPSSFARAERPHIADEGRRKEESYGKKVVRLLTGDGDVLVTVTRRRASAWGDVEPXXXXXXXXXXXXXXXAGPRAATTIDRXXXXXXXX---------XXXXXXXXXAVGRGRNAPGGWKTSD--GGSGRDAL-PSTSAIRKRQPTAPGVHPPATRESSLESRAKGLLPDDLTASPPVYREPGKSELPVIFRATSAPIVRAVPSLRAAERLRWGRAPARANQRGAISSPDGN--ESRHAVPLEEGG-WRQELCEEEAAHISRVVRSAESIVAKSSGRSFGGXXXXXXXXXXXDVERSKSGVRTRIPAPSGQDLGQNLAGG-DDSAEMPQTGLNDGSCDYVSSTIWSGGET 722          
BLAST of mRNA_C-linearis_contig7.14522.1 vs. uniprot
Match: A0A6H5KSY3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSY3_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 1.680e-11
Identity = 36/56 (64.29%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    1 MAWRPGPEP-LGSGSCEYDERDPWTQRFISKTGDGELSLDANAM---NGLETAAGA 52
            MAWRPGP   LG G+ +YDERDPW QRFISKT DGELSLD N     N +  AAG+
Sbjct:    1 MAWRPGPRSSLGLGASDYDERDPWIQRFISKTDDGELSLDVNVSSRRNTMPCAAGS 56          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14522.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G1T6_ECTSI1.290e-22958.33Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5KSY3_9PHAE1.680e-1164.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:2836815..2840983 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14522.1mRNA_C-linearis_contig7.14522.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 2836815..2840983 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14522.1 ID=prot_C-linearis_contig7.14522.1|Name=mRNA_C-linearis_contig7.14522.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=726bp
MAWRPGPEPLGSGSCEYDERDPWTQRFISKTGDGELSLDANAMNGLETAA
GAIFVELIRQQAERPNSPADSSISTWMPGYDMGRHYQQHPPAMRMDPPMA
QYEPFRRTYVSDPTCIPQLRFANVPDAGADHHKREARCHWRRAGRTWSRV
PRFRKGETAFTHDPSYKPPHAVVDKWYRTEAGPKNSLAGRVEESRWQSCH
SMQTGRQPRKPTRSRLPWDPKKAGPGPASYHMRDPWEVKEVCGAVPKSRM
FCEPVRRPRPQTTAFTLPPAGHQDMSVVTSAASTSACDGPSASGLGESRA
RPVTVTPEPSASAAVAAGVTAHYTPPCRRKNCAPRKQRSVCGGGGSTGTR
HPPTKVSAGGRHRPEHQTTTHASSTARAAARGVRPPTVGPSSFARAERPT
ITDECRRKEESYGKKVVRLLTREGDVLVTVTRRRASAWGSSSQGPLGLRP
DCASASAAATAPKKTKVAAAEPQSAAQQEPNKPNHDGRRAVGRHRSSPGS
RNRTAGGGGEGRDAVRDANAAVRAALPAGYAVSPKRGSTLEAQAMRLLPD
DLTASLTAYREPGRAELPLVFRATSAPIVRAAPNSRAAKIINRRGAARAD
TGDVATGPGGGGGDSGTAVATNDMGEWHQEEEARMTRIIRGAEDAVDKSS
GGGGDGGGDGGRKTSIRTRLPAPSDPDFASESPGGMDDKEERAQAEGNDG
SCGFVSSTVWSGGETSATIVQAGEE*
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