prot_C-linearis_contig7.14495.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14495.1
Unique Nameprot_C-linearis_contig7.14495.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length435
Homology
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BLAST of mRNA_C-linearis_contig7.14495.1 vs. uniprot
Match: D7G8M0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8M0_ECTSI)

HSP 1 Score: 150 bits (378), Expect = 1.340e-36
Identity = 114/220 (51.82%), Postives = 134/220 (60.91%), Query Frame = 0 
Query:    2 TEQFSFVARTSVEMLVLRRKHFNIIEIPMLEILKANHAARLQWRARRKQEAHRGRAVLRAAKRALGRAAVRARSFGEDPTLQPHHAQQPHQAN---ASSATGSLPQEGRLHPSGDSSDAVALLAQRERGRQAPSAVNIAGRPPLSRGGPIADNNKYLHRGGREPATAYTGVAAVSHEPRAGGDWEGGXXXXXXXXXXXDVSLAGLSLASGDSMQYSVDSG 218
            TEQF  VARTSVEMLVLRR+HFNII +PMLEI+KANHAARLQWRA+RKQ+AHRGRAVLRAAKRALG+AA R     EDP  Q    Q  +  +   A+SA G+  Q  R     D     +LLAQR+  R + +  + +G   L RG P    + + H  G   A    G   VS    AG +  GG           D SLAGLS+ASGDSMQYSVDSG
Sbjct:  161 TEQFCLVARTSVEMLVLRRQHFNIIAMPMLEIIKANHAARLQWRAQRKQDAHRGRAVLRAAKRALGQAAARV-GGEEDPIFQSCQKQLVNSQSRTAATSAAGNSSQGARPSAPADEGRNTSLLAQRQE-RGSVTKSHSSGWSTLPRGEPSFAKHHH-HPPGDLGANDLAGTV-VSMTWGAGRNPMGGEEEHQDGGGD-DKSLAGLSVASGDSMQYSVDSG 375
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BLAST of mRNA_C-linearis_contig7.14495.1 vs. uniprot
Match: A0A835Z9P8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9P8_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.780e-7
Identity = 33/60 (55.00%), Postives = 44/60 (73.33%), Query Frame = 0 
Query:    2 TEQFSFVARTSVEMLVLRRKHFNIIEIPMLEILKANHAARLQWRARRKQEAHRGRAVLRA 61
            TE FS VART+V+ LVLR +H+ II+   LE++++ HA R  WR  RK+EAHR R V+RA
Sbjct: 1152 TESFSVVARTTVQALVLRARHYAIIDANTLELVRSAHAVRALWRRARKKEAHRARGVVRA 1211
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14495.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G8M0_ECTSI1.340e-3651.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z9P8_9STRA1.780e-755.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:2625044..2627869 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14495.1mRNA_C-linearis_contig7.14495.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 2624817..2628282 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14495.1 ID=prot_C-linearis_contig7.14495.1|Name=mRNA_C-linearis_contig7.14495.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=435bp
MTEQFSFVARTSVEMLVLRRKHFNIIEIPMLEILKANHAARLQWRARRKQ
EAHRGRAVLRAAKRALGRAAVRARSFGEDPTLQPHHAQQPHQANASSATG
SLPQEGRLHPSGDSSDAVALLAQRERGRQAPSAVNIAGRPPLSRGGPIAD
NNKYLHRGGREPATAYTGVAAVSHEPRAGGDWEGGGGGDDAVGGGDDVSL
AGLSLASGDSMQYSVDSGWLPNVPGTGRPSPTGRSGGGSPGGFPSLDDGI
DQQQPDQLGRLQDLQSGGWRPAAGDGNSSGLLGVSVSLPNLGLPTGPRDE
GAAGRGQGYRGLKGGARGGKPGRYTGHKQPGLHGSKSFGAFWGVDPQQAG
DDHYSPPRPRLSNSNHPRNGTGQGHGPAPQAHQKPARRKAAAGARRRSGP
GKPSGATSDVEVVPAVKSAVELTPVRGISRVWAG*
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