prot_C-linearis_contig7.14469.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig7.14469.1
Unique Nameprot_C-linearis_contig7.14469.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length525
Homology
BLAST of mRNA_C-linearis_contig7.14469.1 vs. uniprot
Match: D7FZB3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZB3_ECTSI)

HSP 1 Score: 782 bits (2020), Expect = 1.120e-281
Identity = 417/526 (79.28%), Postives = 448/526 (85.17%), Query Frame = 0
Query:    7 ERGEDVLLSPPSSIDATAVGGEDG-GAPLGAPRIELAYEPRYQRFIVKNKSFTQQFSHVYNKRLLGLKAAVRRAAEERWXXXXXAKGSSKGGVKFVDRLVNMKEGDEWAVIGTTYKTMKLRPSILNEFREDRGISMAVVAPVGSFTSEDDSLVLEDESGRVSISGPGIQCQSLVSGMVIAVKGTVKASGEMVVDDWCPAGLPPPVPP-PSKNPAGFVLLVSGLQVGGKHDPLLVSLLVDFVAGYLGGAGDQESTSARIGRVIVCGDSVAASSAELLNAGTGPSKRLNAEQQRLVASPMNELDVILALLAAAAPVDVMPGESDPANYTLPQQPVHQCLLRNASRFGSLKRVTNPHEAKIGDRVFLGSSGQPLKDMDRYTTVDAEAEDAQKPACLRRLEETLEWRHMAPTAPETLGCYPFVTEDPFIIEECPDIYFAGNQPQFATSLLEGPGGQKVRMVCVPTFASTGQAALLDLETLDCTPLRFSSAVGGVDGDAKTAAAAAGGDKSAAPS------AMDVEATAAD 524
            ERG D+L+SPPSSIDATAVG +   G  LGAPR+ELAYEPRYQRFIVK KSFTQQFSHVYNKRLL LK AVR+AAE+RW      K    GGVKFVDRLVNM+EGDEW VIGTTYK MKLRPSILNEFREDRGISMAVVAPVGSFTSEDDSLVLEDESGRVSISGPGIQ  SLVSG+VIAVKGTV ASGEM+VDDWCPAG+PPPVPP PSK            +VGG+HDPLLVSLLVDFVAGYLGG  DQE TSARIGRVIVCGDSVAA SAELL+ GTGPSKRLNAEQQRLVASPM ELD ILALLAAAAPVDVMPGESDPANYTLPQQP+H CLLRNASRFG+LKRVTNPHEAKIG+RVFLGSSGQPL DM RYTT +AEA+   KPACLRRLEE L+WRHMAPTAPETLGCYPFVTEDPF++EECPDI+FAGNQPQFATS+LEG  G K R+VCVP FA+TGQAALL+LE+L+CTPL FSS VGG   DA       GG K+AAP+      AM+VEA AAD
Sbjct:    6 ERGADMLMSPPSSIDATAVGADGARGDELGAPRVELAYEPRYQRFIVKKKSFTQQFSHVYNKRLLALKGAVRQAAEKRW-----GKEGEGGGVKFVDRLVNMREGDEWVVIGTTYKAMKLRPSILNEFREDRGISMAVVAPVGSFTSEDDSLVLEDESGRVSISGPGIQSSSLVSGLVIAVKGTVTASGEMLVDDWCPAGIPPPVPPSPSK------------KVGGRHDPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSAELLS-GTGPSKRLNAEQQRLVASPMKELDTILALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERVFLGSSGQPLLDMARYTTPEAEADKDAKPACLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATSILEGADGHKGRVVCVPAFAATGQAALLNLESLECTPLNFSSTVGGGVDDAD-----GGGVKTAAPADDNSSPAMEVEAAAAD 508          
BLAST of mRNA_C-linearis_contig7.14469.1 vs. uniprot
Match: A0A835YHI6_9STRA (DNA polymerase alpha/epsilon subunit B-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHI6_9STRA)

HSP 1 Score: 388 bits (996), Expect = 8.610e-126
Identity = 231/546 (42.31%), Postives = 316/546 (57.88%), Query Frame = 0
Query:   14 LSPPSSIDATAVGGEDGGAPLG-APRIELAYEPRYQRFIVKNKSFTQQFSHVYNKRLLGLKAAVRRAAEERWXXXXXAKGSSKGGVKFVDRLVNMKE-----GDEWAVIGTTYKTMKLRPSILNEFREDRGISMAVVAPVGSFTSEDDSLVLEDESGRVSISG----PGIQ-CQSLVSGMVIAVKGTVKASGEMVVDDWCPAGLPPPVPPP---SKNPAGFVLLVSGLQVGGKHDPLLVSLLVDFVAGYLGGAGDQESTSARIGRVIVCGDSVAASSAELLNAGTGP--SKRLNAEQQRLVASPMNELDVILALLAAAAPVDVMPGESDPANYTLPQQPVHQ---------------------------------------------CLLRNASRFGSLKRVTNPHEAKIGDRVFLGSSGQPLKDMDRYTTV--DAEAEDAQKPACLRRLEETLEWRHMAPTAPETLGCYPFVTEDPFIIEECPDIYFAGNQPQFATSLLEGPGGQK---------VRMVCVPTFASTGQAALLDLETLDCTPLRF 487
            L+P S++    V    GG P G   R+E  Y P  QRF ++ + F QQ+SH+Y +RL  L+AA    AE  W       G  +  ++  +RLV               IGT YKTM+LRPS+L E+R++RGIS A+  P G F + DDSL+LED+SGR++++     P +   Q L +G+V+AV+G+V+A G+M V+ WCP GLPP   PP   +  P   +LLVSG+  GG  DPL   L +D +AGYLGGAGD E   AR+ RV+VCG+S       L  A +G   S +L+AEQQR   +P+ E D  LA +A   PVD+MP  SD +NY LPQ+  H                                              CLL  ASR+ + +  TNPHEA +G R+ LG++GQPL D+ +YT     A  ++      L+ LE  L W+H+APTAP+TLGCYPF+TEDPF++EECP ++FAGNQP+FAT L+EG  GQ+         VR+VCVP+FA+TG+  L+DL+TL+ TPL+F
Sbjct:    8 LAPSSTLKFKKV--PSGGTPEGQVARLEATYTPHDQRFTLRRREFKQQYSHIYARRLARLRAAAAAEAERLW-------GGDQ--LRRCERLVQANADGAGGSGPCVCIGTLYKTMRLRPSVLVEYRDERGISEAIGVPRGDFAAPDDSLLLEDDSGRLNLAADTTTPDVMPAQDLPTGIVVAVRGSVRADGDMAVEAWCPPGLPPQPSPPEGAAHPPGACLLLVSGMLAGGPQDPLPTRLFLDHLAGYLGGAGDHEQI-ARVVRVVVCGNSAXXXXXXLAGAASGSIGSGKLSAEQQRERTAPLRECDAELAQVAV--PVDIMPSASDASNYMLPQRAAHMLFRKRAIQQRKGNIRPNVAAAXXXXXXXXXXXXXXXXXXXXXXHPCLLPLASRYPNARLATNPHEAWVGTRLVLGTAGQPLDDILQYTAAAEGAGGDEGDSARRLQMLENMLRWQHIAPTAPDTLGCYPFLTEDPFVLEECPHVFFAGNQPRFATRLVEGHDGQQKGLLNRAAQVRVVCVPSFATTGEVVLIDLDTLEATPLQF 539          
BLAST of mRNA_C-linearis_contig7.14469.1 vs. uniprot
Match: A0A7S1XWT2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWT2_9STRA)

HSP 1 Score: 352 bits (903), Expect = 1.570e-112
Identity = 207/509 (40.67%), Postives = 290/509 (56.97%), Query Frame = 0
Query:   13 LLSPPSSIDATAVGGEDGGAPLGAP----RIELAYEPRYQRFIVKNKSFTQQFSHVYNKRLLGLKAAVRRAAEERWXXXXXAKGSSKGGVKFVDRLVNMKEGDEWAVIGTTYKTMKLRPSILNEFREDRGISMAVVAPVGSFTSEDDSLVLEDESGRVSISGP--GIQCQSLVSGMVIAVKGTVKASGEMVVDDWCPAGLPPPVP------PPSKNPAG----FVLLVSGLQVGGKHDPLLVSLLVDFVAGYLGGAGDQESTSARIGRVIVCGDSVAASSAELLNAGTGPSKRLNAEQQRLVASPMNELDVILALLAAAAPVDVMPGESDPANYTLPQQPVHQCLLRNASRFGSLKRVTNPHEAKIGDRVFLGSSGQPLKDMDRYTTVDA--------------EAEDAQKPAC----LRRLEETLEWRHMAPTAPETLGCYPFVTEDPFIIEECPDIYFAGNQPQFATSLLEGPGGQKVRMVCVPTFASTGQAALLDLETLDCTPLRF 487
            LL+PP+  +         GA   +     R    + P +QRF V+ + F QQFSH+Y+KR   +K A   AA  RW         +  G + V+R+V +KEG+     G  YK MKLR S+++E++ +  IS AV  P+  +TS +D+L +ED+SGR+ ++G    +    L +G+  AV G + A GE VV+DWC  G+PPP+        P   P G    ++LL SGL  GG  DP+  ++LVDFVAG LGGA D+    A I RVI+ G+S+A     L +      K L A  Q  +A P+ +LD +LA LA+A PVDVMPG  D ++  +PQQP H+ LL  A R+ SL+R  NP+EA +  R+ LGSSGQP+ D+ ++T   A               A +A+  A     L  LE  L WRHMAPTAP+TL CYPF  EDPF++E CP ++FAGNQ  F   L++ PGG K  ++ VP F  T +A L++L TL+ + L F
Sbjct:    6 LLAPPTEAELNLCLSPGPGAAKPSATLLSRRSCEHTPTWQRFNVRGRRFDQQFSHLYSKRYAQMKGATWAAARARW---------ANSGARAVERIVQLKEGERTFCCGVLYKQMKLRQSVIDEYQRELAISGAVY-PLEDYTSSEDALDIEDDSGRMRLAGDVAALPVHLLATGLTAAVLGVMGADGEFVVEDWCVPGVPPPLENTNGAVAPKAEPEGDEGPYLLLASGLGFGGATDPMPAAMLVDFVAGRLGGAADRSDVGANICRVILAGNSMA----PLQDGERLRDKNLPAADQERIAGPLYQLDAMLAQLASACPVDVMPGADDASSVAMPQQPFHRSLLPTACRYSSLQRPPNPYEALVEGRLVLGSSGQPVTDLLKFTRPAAPKPKGENDDGDDEGNATEAEGAAAADFTLSALERMLGWRHMAPTAPDTLPCYPFYNEDPFVLEHCPQVFFAGNQKAFGQRLIDAPGGGKCLLLSVPKFDETREAVLVNLRTLEASTLSF 500          
BLAST of mRNA_C-linearis_contig7.14469.1 vs. uniprot
Match: A0A2P6TSX7_CHLSO (DNA polymerase delta small subunit n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TSX7_CHLSO)

HSP 1 Score: 337 bits (864), Expect = 3.140e-107
Identity = 199/483 (41.20%), Postives = 282/483 (58.39%), Query Frame = 0
Query:   11 DVLLSPPSSIDATAVGGEDGGAPLG-APRIELAYEPRYQRFIVKNKSFTQQFSHVYNKRLLGLKAAVRRAAEERWXXXXXAKGSSKGGVKFVDRLVNMKEGDEWAVIGTTYKTMKLRPSILNEFREDRGISMAVVAPVGSFTSEDDSLVLEDESGRVSISGPGIQCQSLVSGMVIAVKGTVKASGEMVVDDWCPAGLPPPVPPPSKNPAGFVLLVSGLQVG-GKHDPLLVSLLVDFVAGYLGGAGDQESTSARIGRVIVCGDSVAASSAELLNAGTGPSKRLNAEQQRLVASPMNELDVILALLAAAAPVDVMPGESDPANYTLPQQPVHQCLLRNASRFGSLKRVTNPHEAKIGDRVFLGSSGQPLKDMDRYTTVDAEAEDAQKPACLRRLEETLEWRHMAPTAPETLGCYPFVTEDPFIIEECPDIYFAGNQPQFATSLLEGPGGQKVRMVCVPTFASTGQAALLDLETLDCTPLRFSSAV 491
            D LL+PP+        G+D  AP G   R   +Y  R +RF++K+K + +Q++ +Y  RLL ++A V  AA   W            G+  V R++++ E  E AV+GT YK M L+PSIL+E+ +DR +   +      F++ +D LVLEDE  RV++ G        V+G+V AV+G V+ +G+  V     AG PP  PP  +    +V LVSGL V  G+  PL + LLVD++ G LGG G++     RI RV+V G  +  SSA      + P+   +  QQ     P+ ++D+ L+ LAAA PVD+MPG  DPANYTLPQQP+H+CL   A+ + SL+R TNPH+  +    FLG+SGQ + D+ RY+ ++  A      A L +L   L+WRH+APTAP+TL  YP+   DPFI+E  P + FAG QP FAT + E  GG  VR+V +P F STG   LL+L TL C P+ F  A+
Sbjct:   18 DELLAPPA--------GDDASAPTGMVVRASASYATRDERFLLKHKEYDRQYAQLYFYRLLQMRAHVEAAARSAWP-----------GIPVV-RILSVPEDGEVAVVGTLYKEMALKPSILDEYVKDRSLGQQLGR--ARFSTPEDRLVLEDEGARVTLCGDACPVGECVTGVVAAVRGRVQPNGDFEVTGCVYAGAPPQ-PPLPRCEDKYVALVSGLGVSDGEGSPLRLQLLVDYLGGLLGGEGERSGVVGRIARVVVAGGLLKTSSAL-----SQPTAYSSVRQQAAALGPLRDVDMALSELAAAVPVDIMPGAGDPANYTLPQQPLHRCLFPGAAAYSSLQRATNPHDFDVDGVTFLGTSGQNVDDIYRYSDIEDRA------AILGKL---LQWRHLAPTAPDTLAAYPYYESDPFILESSPHVLFAGGQPAFATGVAEVAGGGSVRLVAIPNFCSTGCVVLLNLSTLACQPIYFDDAM 463          
BLAST of mRNA_C-linearis_contig7.14469.1 vs. uniprot
Match: A0A4D9CYY3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYY3_9STRA)

HSP 1 Score: 340 bits (871), Expect = 3.660e-107
Identity = 208/531 (39.17%), Postives = 299/531 (56.31%), Query Frame = 0
Query:    1 MKGGGGERGEDVLLSPPSSIDATAV-------GGEDGGAPLGAPRIE-------LAYEPRYQRFIVKNKSFTQQFSHVYNKRLLGLKAAVRRAAEERWXXXXXAKGSSKGGVKFVDRLVNMKEGDEWA-VIGTTYKTMKLRPSILNEFREDRGISMAVVAPVG---SFTSEDDSLVLEDESGRVSISGPGIQCQSLVSGMVIAVKGTVKASGEMVVDDWCPAGLPPPVPPPS----------------KNPAGFVLLVSGLQVGGKHDPLLVSLLVDFVAGYLGGAGDQESTSARIGRVIVCGDSVAASSAELLNAGTGPSKRLNAEQQRLVASPMNELDVILALLAAAAPVDVMPGESDPANYTLPQQPVHQCLLRNASRFGSLKRVTNPHEAKIGDRVFLGSSGQPLKDMDRYTTVDAEAEDAQKPAC--LRRLEETLEWRHMAPTAPETLGCYPFVTEDPFIIEECPDIYFAGNQPQFATSLLE--------GPGGQKVRMVCVPTFASTGQAALLDLETLDCTPLRF 487
            M GGG    + V +S  S I + A+       G ED G   G  R E       L+Y P YQRF  K ++FTQQ+SH+Y  RL  ++  +  AA  +W          +       +++++ +G   + VIGT +K M LRPS+L+E+R++  +  A+    G   ++TS +D+LVLEDESGRV++SG  +     V+G+V+A KG     G   V+D C AG+P     P                 + P  +V+L+SGL++  + D L + LL+D+V G+ G A ++    +RIGRVIV GD +A   A +L       K + ++QQ   A P   +D++LA LA+A PVDVMPG  DP+N+TLPQQP+H C+L +ASR+ S K V NP+EA +  R+FLG++GQ   D+ R T   +        A   L  +E+TL WRH+APTAP+TL CYPF  +DPF++   P +YFAGNQP FA  L+E        G  G+K  +V VP+FA TG   L++L  L  TPL F
Sbjct:    1 MAGGG----DFVDMSTSSVITSDAMLDSILQNGEEDPGNQDGRERSEEKLQRVTLSYTPTYQRFRAKARTFTQQYSHMYTNRLRLMRPMLEAAATAKWGTGAPDGKEGEDAPTLCQKIIDLVDGARTSMVIGTIFKDMPLRPSLLDEYRDEAALQGALQPAPGPDTNYTSSEDTLVLEDESGRVTLSGEALPVGDFVTGLVVAAKGRA-VGGRFFVEDVCAAGMPEQEAGPEGXXXXXXXXXXXGGRGREPQ-YVMLMSGLRLSDRSDLLPLQLLIDYVQGHAGTADEKRRLVSRIGRVIVAGDLLAPFEASILK-----EKHMTSKQQEEFALPFKHVDLVLAQLASAVPVDVMPGADDPSNHTLPQQPIHPCILPHASRYASFKTVPNPYEAWLQRRLFLGNAGQIPADLARSTAPPSLPSSPASSAARTLDLMEKTLHWRHLAPTAPDTLACYPFCDDDPFVLPSLPHVYFAGNQPAFAARLVEEGKEGGAEGKEGKKCLLVAVPSFAETGTVVLVNLSDLTATPLHF 520          
BLAST of mRNA_C-linearis_contig7.14469.1 vs. uniprot
Match: A0A2K1KWA5_PHYPA (Uncharacterized protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KWA5_PHYPA)

HSP 1 Score: 335 bits (860), Expect = 6.330e-107
Identity = 184/459 (40.09%), Postives = 279/459 (60.78%), Query Frame = 0
Query:   33 PLGAPRIELAYEPRYQRFIVKNKSFT-QQFSHVYNKRLLGLKAAVRRAAEERWXXXXXAKGSSKGGVKFVDRLVNMKEGDEWAVIGTTYKTMKLRPSILNEFREDRGISMAVVAPVGSFTSEDDSLVLEDESGRVSISGPGIQCQSLVSGMVIAVKGTVKASGEMVVDDWCPAGLPPPVPPPSKNPAGFVLLVSGLQVGGKH-DPLLVSLLVDFVAGYLGGAGDQESTSARIGRVIVCGDSVAASSAELLNAGTGPSKRLNAEQQRLVASPMNELDVILALLAAAAPVDVMPGESDPANYTLPQQPVHQCLLRNASRFGSLKRVTNPHEAKIGDRVFLGSSGQPLKDMDRYTTVDAEAEDAQKPACLRRLEETLEWRHMAPTAPETLGCYPFVTEDPFIIEECPDIYFAGNQPQFATSLLEGPGGQKVRMVCVPTFASTGQAALLDLETLDCTPLRFSS 489
            P   PR+   Y  + Q++ +  + +  QQ+S +Y  R++ ++  +    +ERW                V  ++ ++E     VIGT YK M+L+PS+L+E+ ++R  S+  +A    FT +DD L+LEDESGRV ++G  +     V+G+V+A+ G  +  GE  V+D   AGLPP  P  + +   FVL VSGL++GG   +PL + LLVD + G+LG   +Q S S++I R+++ G S+       L       + ++A+ Q  +  P+ ELD+ L  ++AA PVD+MPG +DPAN++LPQQP+H+CL   A+ + +    TNPH+ ++ D +FLG+SGQ + D+ +Y+    EAED      L  +E TL WRH+APTAP+TLGCYPF+  DPFI+E CP +YF GNQP +A+ LL GP  QKVR+VC+P F  T  A L++L  LDC  L+ S+
Sbjct:   10 PATIPRLHAPYVSQDQKYGLSMQRYKGQQYSQLYFIRIVTIRQHLTPCIQERWPSLP------------VCNILALEEDKACVVIGTLYKQMQLKPSVLDEYSKER--SVVPLASPNKFTHKDDYLILEDESGRVKLTGSAVLSSMYVTGVVVAIVGREEKDGEFFVEDVMVAGLPPQKPLKNSDVDKFVLFVSGLKIGGHGTNPLDLQLLVDHLTGHLGEVQEQ-SLSSQIVRMVIAGGSLD------LQTSISNGQPMSAKNQSKLVEPVKELDLALTQISAAMPVDIMPGANDPANFSLPQQPLHKCLFPGATMYNTFVSATNPHQFELDDVLFLGTSGQNIDDLSKYS----EAEDR-----LDFMERTLMWRHLAPTAPDTLGCYPFIDRDPFILETCPHVYFCGNQPHYASRLLTGPSAQKVRLVCIPEFHKTSTAVLVNLRNLDCHVLKLST 438          
BLAST of mRNA_C-linearis_contig7.14469.1 vs. uniprot
Match: A0A6J2QCS0_COTGO (DNA polymerase delta subunit 2 n=12 Tax=Perciformes TaxID=8111 RepID=A0A6J2QCS0_COTGO)

HSP 1 Score: 329 bits (843), Expect = 5.270e-104
Identity = 189/464 (40.73%), Postives = 284/464 (61.21%), Query Frame = 0
Query:   28 EDGGAPLGAPRIELAYEPRYQRFIVKNKSFTQQFSHVYNKRLLGLKAAVRRAAEERWXXXXXAKGSSKGGVKFVDRLVNMKEGDEWAVIGTTYKTMKLRPSILNEFREDRGISMAVVAPVGSFTSEDDSLVLEDESGRVSISGPGIQCQSLVSGMVIAVKGTVKASGEMVVDDWCPAGLPPPVPPPSKNPAGFVLLVSGLQVGGKH-DPLL-VSLLVDFVAGYLGGAGDQESTSARIGRVIVCGDSVAASSAELLNAGTGPSKRLNAEQQRLVASPMNELDVILALLAAAAPVDVMPGESDPANYTLPQQPVHQCLLRNASRFGSLKRVTNPHEAKIGDRVFLGSSGQPLKDMDRYTTVDAEAEDAQKPACLRRLEETLEWRHMAPTAPETLGCYPFVTEDPFIIEECPDIYFAGNQPQFATSLLEGPGGQKVRMVCVPTFASTGQAALLDLETLDCTPLRFSS 489
            ED G P+   R+ LAY P  +R+ V  +SF++Q++H+Y  RL+ ++  +   A+++W           G    + +L +++ G++  ++GT +K M+L+PSIL E  E+  +            SE D L+LEDE  R+ + G  I     V+G VIA+ G  K  G+  V+D+C A LPP  P P+ +   FVLLVSGL +G  H D +L + LLVD V G LG  G+Q S +A I RV++ G+ ++ S+ +  +A   P K L  + Q      +  LD +L  LAA+ PVDVMPG+ DP NYTLPQQP+H+C+   +S + +L+ V+NPH++ I    FLG+SGQ + D+ +Y+++D           L  LE TL  RH+APTAP+TLGC+PF  +DPFI+EECP++YF+GN P F + L++GP GQ+V +V +P F+ST  A L++L TL C P+ FS+
Sbjct:   20 EDQGGPV-FERMSLAYSPCSERYTVGERSFSRQYAHIYAARLMQMRPLLSERAQQKW-----------GSDVLIRKLCDLQTGEQCCIVGTLFKRMELQPSILKEISEEHNLLPQPAR--AKLISETDELILEDELQRIKLEGK-IDRDICVTGSVIAIYGAEKNDGKFTVEDFCMADLPPQTPRPALSSDRFVLLVSGLGLGSSHADSMLGLQLLVDMVTGQLGDQGEQ-SGAATISRVLLAGNLLSQSTQDS-DAAKKP-KYLTKKTQAGSVEAIRLLDELLLQLAASVPVDVMPGQYDPTNYTLPQQPLHRCMFPLSSVYPTLQLVSNPHQSIIDGVRFLGTSGQNVCDIQKYSSMDRH---------LEILENTLRLRHLAPTAPDTLGCFPFYQKDPFILEECPNVYFSGNAPTFESKLIKGPDGQEVLLVTIPDFSSTQTACLVNLRTLACEPVSFSA 456          
BLAST of mRNA_C-linearis_contig7.14469.1 vs. uniprot
Match: A0A7S0RED1_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RED1_9CHLO)

HSP 1 Score: 327 bits (837), Expect = 4.160e-103
Identity = 198/492 (40.24%), Postives = 287/492 (58.33%), Query Frame = 0
Query:   10 EDVLLSPPSSIDA----TAVGGEDGGAPLGAP--RIELAYEPRYQRFIVKNKSFTQQFSHVYNKRLLGLKAAVRRAAEERWXXXXXAKGSSKGGVKFVDRLVNMKEGDEWAVIGTTYKTMKLRPSILNEFREDRGISMAVVAPVGSFTSEDDSLVLEDESGRVSISGPGIQCQSLVSGMVIAVKGTVKASGEMVVDD--WCPAGLPPPVPPPSKNPAG----FVLLVSGLQVGGKHDPLLVSLLVDFVAGYLGGAGDQESTSARIGRVIVCGDSVAASSAELLNAGTGPSKRLNAEQQRLVASPMNELDVILALLAAAAPVDVMPGESDPANYTLPQQPVHQCLLRNASRFGSLKRVTNPHEAKIGDRVFLGSSGQPLKDMDRYTTVDAEAEDAQKPACLRRLEETLEWRHMAPTAPETLGCYPFVTEDPFIIEECPDIYFAGNQPQFATSLLEGPGGQKVRMVCVPTFASTGQAALLDLETLDCTPLRFSS 489
            +D++   PS+ D     T +      A    P  R    Y  +  RFIV+ KSF +Q++ +Y  RL+     VR A +E++     AK            ++++++G E  ++GT YK M L+P+IL+E+ ++R +   V A     TS+ D+LVLEDE  RV +SG  +     V+G+V+AVKGT +  G   V D  + P G    VP P +  AG    +V LVSGLQ+GG  +PL   LL+D + G LG + DQE  SAR+ RV++ GDS A    ++       + +LN +QQ  + +P+ ELD+ LA LAAA PVDVMPG +D  N +LPQQP+H+ L   A+R+ + + VTNP+E    D  FLG+SGQ + D+ +Y  V+           L  LE T  W+H+APTAP+TL  YPF   DPFI+E+ P +YF GNQP+FAT ++ GP GQ  R++ +P FA +G A L++L+TL C PL FS+
Sbjct:    3 QDMVFEAPSAQDCDGFDTMLSARKDDAMEVEPMTRETSKYLNKSARFIVEKKSFKEQYAQLYFTRLMLTSPRVREAIKEKFPEAKVAK------------ILDLEDGQECVIVGTLYKDMLLKPTILDEYTKERSVEPLVRA--SKLTSDSDTLVLEDEGARVRLSGEALDLAKHVTGIVVAVKGTAERDGNFTVSDVLYAPPGPQAAVPLPREVGAGTSGRYVALVSGLQLGGGGNPLPAQLLIDHLCGLLGSSPDQE-LSARVVRVVLAGDSFAPGVNQVA------AGKLNKKQQADMKAPLLELDLGLAQLAAAMPVDVMPGPADFTNVSLPQQPMHRVLFPGAARYSTFQGVTNPYEFDCEDISFLGTSGQNVDDLYKYCDVEDR---------LDLLEATWRWQHLAPTAPDTLATYPFSDRDPFIVEQAPHVYFVGNQPEFATRVVTGPAGQVTRLLALPRFADSGMAVLVNLDTLACHPLVFST 464          
BLAST of mRNA_C-linearis_contig7.14469.1 vs. uniprot
Match: B5X3P2_SALSA (DNA polymerase delta subunit 2 n=19 Tax=Salmonidae TaxID=8015 RepID=B5X3P2_SALSA)

HSP 1 Score: 326 bits (836), Expect = 6.430e-103
Identity = 184/471 (39.07%), Postives = 277/471 (58.81%), Query Frame = 0
Query:   27 GEDGGAPLGAPRIELAYEPRYQRFIVKNKSFTQQFSHVYNKRLLGLKAAVRRAAEERWXXXXXAKGSSKGGVKFVDRLVNMKEGDEWAVIGTTYKTMKLRPSILNEFREDRGISMAVVAPVGSFTSEDDSLVLEDESGRVSISGPGIQCQSLVSGMVIAVKGTVKASGEMVVDDWCPAGLPPPVPPPSKNPAGFVLLVSGLQVGGKH--DPLLVSLLVDFVAGYLGGAGDQESTSARIGRVIVCGDSVAASSAELLNAGTGPSKRLNAEQQRLVASPMNELDVILALLAAAAPVDVMPGESDPANYTLPQQPVHQCLLRNASRFGSLKRVTNPHEAKIGDRVFLGSSGQPLKDMDRYTTVDAEAEDAQKPACLRRLEETLEWRHMAPTAPETLGCYPFVTEDPFIIEECPDIYFAGNQPQFATSLLEGPGGQKVRMVCVPTFASTGQAALLDLETLDCTPLRFSSAVGGVD 495
            G +   P    R++ AY P  +RF +  +SF +Q++H+Y  RL+ +   +   A+++W           G    + +L +++ G++  ++GT +K M+L+PSIL E  E+   ++    P   + S+ D L+LEDE  R+ + G  I     V+G VIA+ G  K  G+  VDD+C A LPP  P  + +   FVLL+SGL +GG H    L + LLVD V G+LG  G+Q   S  I RV++ G+ ++ S+ +  +A T  +K L  + Q      M  LD +L  L ++ PVDVMPG+ DP NYTLPQQP+H C+   +S + +L   +NPH+A +     LG+SGQ +KD+ +Y+++D+          L  LE TL  RH+APTAP+TLGCYPF  +DPFI+EECP +YF+GN P +    + G  GQ+V +V +P F+ST  A L++L TL+C P+RFSS   G D
Sbjct:   21 GSEDQEPSVFDRVKPAYSPCSERFKLGERSFNRQYAHIYATRLMQMSPLLTERAQQKW-----------GADVRIRKLCDLQMGEQCCIVGTLFKHMELQPSILKEISEEH--NLLPQPPRTRYISDSDELILEDELQRIKLEG-NIDVDKFVTGSVIAIYGAEKNDGKFTVDDFCTADLPPQTPRTTLSSDRFVLLLSGLGLGGSHADSMLALQLLVDMVTGHLGDQGEQSGAST-ISRVLLAGNLLSQSTQDK-DAST-KAKYLTKKTQAGTVDAMRLLDEMLMQLVSSVPVDVMPGQYDPTNYTLPQQPLHHCMFPLSSTYPTLLLASNPHQATLDGVRILGTSGQNVKDIQKYSSMDSH---------LEILENTLRLRHLAPTAPDTLGCYPFYLKDPFILEECPHVYFSGNAPSYQAKRITGAEGQEVLLVAIPEFSSTQTACLINLRTLECEPIRFSSFSAGDD 465          
BLAST of mRNA_C-linearis_contig7.14469.1 vs. uniprot
Match: A0A2R6X3B9_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X3B9_MARPO)

HSP 1 Score: 325 bits (832), Expect = 1.430e-102
Identity = 185/461 (40.13%), Postives = 273/461 (59.22%), Query Frame = 0
Query:   37 PRIELAYEPRYQRFIVKNKSFT-QQFSHVYNKRLLGLKAAVRRAAEERWXXXXXAKGSSKGGVKFVDRLVNMKEGDEWAVIGTTYKTMKLRPSILNEFREDRGISMAVVAPVGSFTSEDDSLVLEDESGRVSISGPGIQCQSLVSGMVIAVKGTVKASGEMVVDDWCPAGLPPPVPPPSKNPAG---FVLLVSGLQVGGKH-DPLLVSLLVDFVAGYLGGAGDQESTSARIGRVIVCGDSVAASSAELLNAGTGPSKRLNAEQQRLVASPMNELDVILALLAAAAPVDVMPGESDPANYTLPQQPVHQCLLRNASRFGSLKRVTNPHEAKIGDRVFLGSSGQPLKDMDRYTTVDAEAEDAQKPACLRRLEETLEWRHMAPTAPETLGCYPFVTEDPFIIE-ECPDIYFAGNQPQFATSLLEGPGGQKVRMVCVPTFASTGQAALLDLETLDCTPLRFSSAV 491
            PR++  Y    ++F +K + +  QQ+S +Y  RL   +  +    +ERW                V  ++ + EG    VIGT YK MKL+P+IL+E+ ++R +   VV    +FT  +D L+LEDESGRV + G  I     V+G+V+AV G     GE +V++    GL P  P P++  +    +V  VSGL+ GG   +PL V LLVD + G+LG   +Q S SA++ R I+ GDSV       L A     + L+++ Q  +  P+ ELD++L  LA+A PVD+MPG  DPAN++LPQQP+H+CL   A+ + +    TNPH+ ++    FLG+SGQ ++D+D+Y+  D   +          +E TL WRH+APTAP+TLGCYPF   DPF+IE  CP +YF GNQ +F+T L+ GP G+ VR+VC+P FA TG A L+ L TL+C  +  S+++
Sbjct:   10 PRVQATYVSHNEKFELKKQKYKGQQYSQLYFFRLTFTRQYLNPRIKERWPSY------------IVTNILGLDEGKVCVVIGTLYKQMKLKPNILDEYSKERSVGGLVVP--SNFTDAEDYLILEDESGRVKLVGDCISPAVYVTGVVVAVCGQPGKDGEFLVEEILEPGLAPQPPLPTRKKSESEKYVAFVSGLRCGGPETNPLQVQLLVDHLTGHLGEEQEQ-SLSAQVVRTIIAGDSVQ------LQAQALHGQPLSSKDQHKLIEPIKELDLVLTQLASAMPVDIMPGSKDPANFSLPQQPLHKCLFPGATAYSTFVSATNPHQFELDGVGFLGTSGQNIEDLDKYSLADDPVD---------YMERTLSWRHIAPTAPDTLGCYPFHDRDPFLIEPSCPHVYFCGNQDKFSTRLIRGPKGEMVRLVCIPRFAETGTAVLVSLSTLECHCVTLSTSL 440          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14469.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZB3_ECTSI1.120e-28179.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YHI6_9STRA8.610e-12642.31DNA polymerase alpha/epsilon subunit B-domain-cont... [more]
A0A7S1XWT2_9STRA1.570e-11240.67Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A2P6TSX7_CHLSO3.140e-10741.20DNA polymerase delta small subunit n=1 Tax=Chlorel... [more]
A0A4D9CYY3_9STRA3.660e-10739.17Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A2K1KWA5_PHYPA6.330e-10740.09Uncharacterized protein n=3 Tax=Physcomitrium pate... [more]
A0A6J2QCS0_COTGO5.270e-10440.73DNA polymerase delta subunit 2 n=12 Tax=Perciforme... [more]
A0A7S0RED1_9CHLO4.160e-10340.24Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
B5X3P2_SALSA6.430e-10339.07DNA polymerase delta subunit 2 n=19 Tax=Salmonidae... [more]
A0A2R6X3B9_MARPO1.430e-10240.13Uncharacterized protein n=1 Tax=Marchantia polymor... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR040663DNA polymerase delta subunit, OB-fold domainPFAMPF18018DNA_pol_D_Ncoord: 60..201
e-value: 1.9E-33
score: 115.3
NoneNo IPR availableGENE3D2.40.50.430coord: 66..206
e-value: 3.8E-31
score: 109.5
NoneNo IPR availableGENE3D3.60.21.50coord: 214..502
e-value: 6.5E-100
score: 336.4
IPR007185DNA polymerase alpha/delta/epsilon, subunit BPFAMPF04042DNA_pol_E_Bcoord: 221..447
e-value: 2.0E-37
score: 128.6
IPR024826DNA polymerase delta/II small subunit familyPANTHERPTHR10416DNA POLYMERASE DELTA SUBUNIT 2coord: 40..485

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig7contigC-linearis_contig7:2294227..2301300 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig7.14469.1mRNA_C-linearis_contig7.14469.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig7 2293033..2301902 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig7.14469.1 ID=prot_C-linearis_contig7.14469.1|Name=mRNA_C-linearis_contig7.14469.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=525bp
MKGGGGERGEDVLLSPPSSIDATAVGGEDGGAPLGAPRIELAYEPRYQRF
IVKNKSFTQQFSHVYNKRLLGLKAAVRRAAEERWGGGGGAKGSSKGGVKF
VDRLVNMKEGDEWAVIGTTYKTMKLRPSILNEFREDRGISMAVVAPVGSF
TSEDDSLVLEDESGRVSISGPGIQCQSLVSGMVIAVKGTVKASGEMVVDD
WCPAGLPPPVPPPSKNPAGFVLLVSGLQVGGKHDPLLVSLLVDFVAGYLG
GAGDQESTSARIGRVIVCGDSVAASSAELLNAGTGPSKRLNAEQQRLVAS
PMNELDVILALLAAAAPVDVMPGESDPANYTLPQQPVHQCLLRNASRFGS
LKRVTNPHEAKIGDRVFLGSSGQPLKDMDRYTTVDAEAEDAQKPACLRRL
EETLEWRHMAPTAPETLGCYPFVTEDPFIIEECPDIYFAGNQPQFATSLL
EGPGGQKVRMVCVPTFASTGQAALLDLETLDCTPLRFSSAVGGVDGDAKT
AAAAAGGDKSAAPSAMDVEATAAD*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040663DNA_pol_D_N
IPR007185DNA_pol_a/d/e_bsu
IPR024826DNA_pol_delta/II_ssu