mRNA_C-linearis_contig7.14469.1 (mRNA) Chordaria linearis ClinC8C monoicous
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Overview
Homology
BLAST of mRNA_C-linearis_contig7.14469.1 vs. uniprot
Match: D7FZB3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZB3_ECTSI) HSP 1 Score: 784 bits (2024), Expect = 3.220e-278 Identity = 417/526 (79.28%), Postives = 448/526 (85.17%), Query Frame = 1
Query: 169 ERGEDVLLSPPSSIDATAVGGEDG-GAPLGAPRIELAYEPRYQRFIVKNKSFTQQFSHVYNKRLLGLKAAVRRAAEERWXXXXXAKGSSKGGVKFVDRLVNMKEGDEWAVIGTTYKTMKLRPSILNEFREDRGISMAVVAPVGSFTSEDDSLVLEDESGRVSISGPGIQCQSLVSGMVIAVKGTVKASGEMVVDDWCPAGLPPPVPP-PSKNPAGFVLLVSGLQVGGKHDPLLVSLLVDFVAGYLGGAGDQESTSARIGRVIVCGDSVAASSAELLNAGTGPSKRLNAEQQRLVASPMNELDVILALLAAAAPVDVMPGESDPANYTLPQQPVHQCLLRNASRFGSLKRVTNPHEAKIGDRVFLGSSGQPLKDMDRYTTVDAEAEDAQKPACLRRLEETLEWRHMAPTAPETLGCYPFVTEDPFIIEECPDIYFAGNQPQFATSLLEGPGGQKVRMVCVPTFASTGQAALLDLETLDCTPLRFSSAVGGVDGDAKTAAAAAGGDKSAAPS------AMDVEATAAD 1722
ERG D+L+SPPSSIDATAVG + G LGAPR+ELAYEPRYQRFIVK KSFTQQFSHVYNKRLL LK AVR+AAE+RW K GGVKFVDRLVNM+EGDEW VIGTTYK MKLRPSILNEFREDRGISMAVVAPVGSFTSEDDSLVLEDESGRVSISGPGIQ SLVSG+VIAVKGTV ASGEM+VDDWCPAG+PPPVPP PSK +VGG+HDPLLVSLLVDFVAGYLGG DQE TSARIGRVIVCGDSVAA SAELL+ GTGPSKRLNAEQQRLVASPM ELD ILALLAAAAPVDVMPGESDPANYTLPQQP+H CLLRNASRFG+LKRVTNPHEAKIG+RVFLGSSGQPL DM RYTT +AEA+ KPACLRRLEE L+WRHMAPTAPETLGCYPFVTEDPF++EECPDI+FAGNQPQFATS+LEG G K R+VCVP FA+TGQAALL+LE+L+CTPL FSS VGG DA GG K+AAP+ AM+VEA AAD
Sbjct: 6 ERGADMLMSPPSSIDATAVGADGARGDELGAPRVELAYEPRYQRFIVKKKSFTQQFSHVYNKRLLALKGAVRQAAEKRW-----GKEGEGGGVKFVDRLVNMREGDEWVVIGTTYKAMKLRPSILNEFREDRGISMAVVAPVGSFTSEDDSLVLEDESGRVSISGPGIQSSSLVSGLVIAVKGTVTASGEMLVDDWCPAGIPPPVPPSPSK------------KVGGRHDPLLVSLLVDFVAGYLGGVEDQEGTSARIGRVIVCGDSVAAPSAELLS-GTGPSKRLNAEQQRLVASPMKELDTILALLAAAAPVDVMPGESDPANYTLPQQPLHPCLLRNASRFGALKRVTNPHEAKIGERVFLGSSGQPLLDMARYTTPEAEADKDAKPACLRRLEEMLKWRHMAPTAPETLGCYPFVTEDPFVVEECPDIFFAGNQPQFATSILEGADGHKGRVVCVPAFAATGQAALLNLESLECTPLNFSSTVGGGVDDAD-----GGGVKTAAPADDNSSPAMEVEAAAAD 508
BLAST of mRNA_C-linearis_contig7.14469.1 vs. uniprot
Match: A0A835YHI6_9STRA (DNA polymerase alpha/epsilon subunit B-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHI6_9STRA) HSP 1 Score: 387 bits (995), Expect = 2.230e-122 Identity = 231/546 (42.31%), Postives = 316/546 (57.88%), Query Frame = 1
Query: 190 LSPPSSIDATAVGGEDGGAPLG-APRIELAYEPRYQRFIVKNKSFTQQFSHVYNKRLLGLKAAVRRAAEERWXXXXXAKGSSKGGVKFVDRLVNMKE-----GDEWAVIGTTYKTMKLRPSILNEFREDRGISMAVVAPVGSFTSEDDSLVLEDESGRVSISG----PGIQ-CQSLVSGMVIAVKGTVKASGEMVVDDWCPAGLPPPVPPP---SKNPAGFVLLVSGLQVGGKHDPLLVSLLVDFVAGYLGGAGDQESTSARIGRVIVCGDSVAASSAELLNAGTGP--SKRLNAEQQRLVASPMNELDVILALLAAAAPVDVMPGESDPANYTLPQQPVHQ---------------------------------------------CLLRNASRFGSLKRVTNPHEAKIGDRVFLGSSGQPLKDMDRYTTV--DAEAEDAQKPACLRRLEETLEWRHMAPTAPETLGCYPFVTEDPFIIEECPDIYFAGNQPQFATSLLEGPGGQK---------VRMVCVPTFASTGQAALLDLETLDCTPLRF 1611
L+P S++ V GG P G R+E Y P QRF ++ + F QQ+SH+Y +RL L+AA AE W G + ++ +RLV IGT YKTM+LRPS+L E+R++RGIS A+ P G F + DDSL+LED+SGR++++ P + Q L +G+V+AV+G+V+A G+M V+ WCP GLPP PP + P +LLVSG+ GG DPL L +D +AGYLGGAGD E AR+ RV+VCG+S L A +G S +L+AEQQR +P+ E D LA +A PVD+MP SD +NY LPQ+ H CLL ASR+ + + TNPHEA +G R+ LG++GQPL D+ +YT A ++ L+ LE L W+H+APTAP+TLGCYPF+TEDPF++EECP ++FAGNQP+FAT L+EG GQ+ VR+VCVP+FA+TG+ L+DL+TL+ TPL+F
Sbjct: 8 LAPSSTLKFKKV--PSGGTPEGQVARLEATYTPHDQRFTLRRREFKQQYSHIYARRLARLRAAAAAEAERLW-------GGDQ--LRRCERLVQANADGAGGSGPCVCIGTLYKTMRLRPSVLVEYRDERGISEAIGVPRGDFAAPDDSLLLEDDSGRLNLAADTTTPDVMPAQDLPTGIVVAVRGSVRADGDMAVEAWCPPGLPPQPSPPEGAAHPPGACLLLVSGMLAGGPQDPLPTRLFLDHLAGYLGGAGDHEQI-ARVVRVVVCGNSAXXXXXXLAGAASGSIGSGKLSAEQQRERTAPLRECDAELAQVAV--PVDIMPSASDASNYMLPQRAAHMLFRKRAIQQRKGNIRPNVAAAXXXXXXXXXXXXXXXXXXXXXXHPCLLPLASRYPNARLATNPHEAWVGTRLVLGTAGQPLDDILQYTAAAEGAGGDEGDSARRLQMLENMLRWQHIAPTAPDTLGCYPFLTEDPFVLEECPHVFFAGNQPRFATRLVEGHDGQQKGLLNRAAQVRVVCVPSFATTGEVVLIDLDTLEATPLQF 539
BLAST of mRNA_C-linearis_contig7.14469.1 vs. uniprot
Match: A0A7S1XWT2_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWT2_9STRA) HSP 1 Score: 352 bits (902), Expect = 2.810e-109 Identity = 207/509 (40.67%), Postives = 290/509 (56.97%), Query Frame = 1
Query: 187 LLSPPSSIDATAVGGEDGGAPLGAP----RIELAYEPRYQRFIVKNKSFTQQFSHVYNKRLLGLKAAVRRAAEERWXXXXXAKGSSKGGVKFVDRLVNMKEGDEWAVIGTTYKTMKLRPSILNEFREDRGISMAVVAPVGSFTSEDDSLVLEDESGRVSISGP--GIQCQSLVSGMVIAVKGTVKASGEMVVDDWCPAGLPPPVP------PPSKNPAG----FVLLVSGLQVGGKHDPLLVSLLVDFVAGYLGGAGDQESTSARIGRVIVCGDSVAASSAELLNAGTGPSKRLNAEQQRLVASPMNELDVILALLAAAAPVDVMPGESDPANYTLPQQPVHQCLLRNASRFGSLKRVTNPHEAKIGDRVFLGSSGQPLKDMDRYTTVDA--------------EAEDAQKPAC----LRRLEETLEWRHMAPTAPETLGCYPFVTEDPFIIEECPDIYFAGNQPQFATSLLEGPGGQKVRMVCVPTFASTGQAALLDLETLDCTPLRF 1611
LL+PP+ + GA + R + P +QRF V+ + F QQFSH+Y+KR +K A AA RW + G + V+R+V +KEG+ G YK MKLR S+++E++ + IS AV P+ +TS +D+L +ED+SGR+ ++G + L +G+ AV G + A GE VV+DWC G+PPP+ P P G ++LL SGL GG DP+ ++LVDFVAG LGGA D+ A I RVI+ G+S+A L + K L A Q +A P+ +LD +LA LA+A PVDVMPG D ++ +PQQP H+ LL A R+ SL+R NP+EA + R+ LGSSGQP+ D+ ++T A A +A+ A L LE L WRHMAPTAP+TL CYPF EDPF++E CP ++FAGNQ F L++ PGG K ++ VP F T +A L++L TL+ + L F
Sbjct: 6 LLAPPTEAELNLCLSPGPGAAKPSATLLSRRSCEHTPTWQRFNVRGRRFDQQFSHLYSKRYAQMKGATWAAARARW---------ANSGARAVERIVQLKEGERTFCCGVLYKQMKLRQSVIDEYQRELAISGAVY-PLEDYTSSEDALDIEDDSGRMRLAGDVAALPVHLLATGLTAAVLGVMGADGEFVVEDWCVPGVPPPLENTNGAVAPKAEPEGDEGPYLLLASGLGFGGATDPMPAAMLVDFVAGRLGGAADRSDVGANICRVILAGNSMA----PLQDGERLRDKNLPAADQERIAGPLYQLDAMLAQLASACPVDVMPGADDASSVAMPQQPFHRSLLPTACRYSSLQRPPNPYEALVEGRLVLGSSGQPVTDLLKFTRPAAPKPKGENDDGDDEGNATEAEGAAAADFTLSALERMLGWRHMAPTAPDTLPCYPFYNEDPFVLEHCPQVFFAGNQKAFGQRLIDAPGGGKCLLLSVPKFDETREAVLVNLRTLEASTLSF 500
BLAST of mRNA_C-linearis_contig7.14469.1 vs. uniprot
Match: A0A2P6TSX7_CHLSO (DNA polymerase delta small subunit n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TSX7_CHLSO) HSP 1 Score: 337 bits (864), Expect = 3.340e-104 Identity = 199/483 (41.20%), Postives = 282/483 (58.39%), Query Frame = 1
Query: 181 DVLLSPPSSIDATAVGGEDGGAPLG-APRIELAYEPRYQRFIVKNKSFTQQFSHVYNKRLLGLKAAVRRAAEERWXXXXXAKGSSKGGVKFVDRLVNMKEGDEWAVIGTTYKTMKLRPSILNEFREDRGISMAVVAPVGSFTSEDDSLVLEDESGRVSISGPGIQCQSLVSGMVIAVKGTVKASGEMVVDDWCPAGLPPPVPPPSKNPAGFVLLVSGLQVG-GKHDPLLVSLLVDFVAGYLGGAGDQESTSARIGRVIVCGDSVAASSAELLNAGTGPSKRLNAEQQRLVASPMNELDVILALLAAAAPVDVMPGESDPANYTLPQQPVHQCLLRNASRFGSLKRVTNPHEAKIGDRVFLGSSGQPLKDMDRYTTVDAEAEDAQKPACLRRLEETLEWRHMAPTAPETLGCYPFVTEDPFIIEECPDIYFAGNQPQFATSLLEGPGGQKVRMVCVPTFASTGQAALLDLETLDCTPLRFSSAV 1623
D LL+PP+ G+D AP G R +Y R +RF++K+K + +Q++ +Y RLL ++A V AA W G+ V R++++ E E AV+GT YK M L+PSIL+E+ +DR + + F++ +D LVLEDE RV++ G V+G+V AV+G V+ +G+ V AG PP PP + +V LVSGL V G+ PL + LLVD++ G LGG G++ RI RV+V G + SSA + P+ + QQ P+ ++D+ L+ LAAA PVD+MPG DPANYTLPQQP+H+CL A+ + SL+R TNPH+ + FLG+SGQ + D+ RY+ ++ A A L +L L+WRH+APTAP+TL YP+ DPFI+E P + FAG QP FAT + E GG VR+V +P F STG LL+L TL C P+ F A+
Sbjct: 18 DELLAPPA--------GDDASAPTGMVVRASASYATRDERFLLKHKEYDRQYAQLYFYRLLQMRAHVEAAARSAWP-----------GIPVV-RILSVPEDGEVAVVGTLYKEMALKPSILDEYVKDRSLGQQLGR--ARFSTPEDRLVLEDEGARVTLCGDACPVGECVTGVVAAVRGRVQPNGDFEVTGCVYAGAPPQ-PPLPRCEDKYVALVSGLGVSDGEGSPLRLQLLVDYLGGLLGGEGERSGVVGRIARVVVAGGLLKTSSAL-----SQPTAYSSVRQQAAALGPLRDVDMALSELAAAVPVDIMPGAGDPANYTLPQQPLHRCLFPGAAAYSSLQRATNPHDFDVDGVTFLGTSGQNVDDIYRYSDIEDRA------AILGKL---LQWRHLAPTAPDTLAAYPYYESDPFILESSPHVLFAGGQPAFATGVAEVAGGGSVRLVAIPNFCSTGCVVLLNLSTLACQPIYFDDAM 463
BLAST of mRNA_C-linearis_contig7.14469.1 vs. uniprot
Match: A0A4D9CYY3_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CYY3_9STRA) HSP 1 Score: 340 bits (871), Expect = 4.020e-104 Identity = 208/531 (39.17%), Postives = 299/531 (56.31%), Query Frame = 1
Query: 151 MKGGGGERGEDVLLSPPSSIDATAV-------GGEDGGAPLGAPRIE-------LAYEPRYQRFIVKNKSFTQQFSHVYNKRLLGLKAAVRRAAEERWXXXXXAKGSSKGGVKFVDRLVNMKEGDEWA-VIGTTYKTMKLRPSILNEFREDRGISMAVVAPVG---SFTSEDDSLVLEDESGRVSISGPGIQCQSLVSGMVIAVKGTVKASGEMVVDDWCPAGLPPPVPPPS----------------KNPAGFVLLVSGLQVGGKHDPLLVSLLVDFVAGYLGGAGDQESTSARIGRVIVCGDSVAASSAELLNAGTGPSKRLNAEQQRLVASPMNELDVILALLAAAAPVDVMPGESDPANYTLPQQPVHQCLLRNASRFGSLKRVTNPHEAKIGDRVFLGSSGQPLKDMDRYTTVDAEAEDAQKPAC--LRRLEETLEWRHMAPTAPETLGCYPFVTEDPFIIEECPDIYFAGNQPQFATSLLE--------GPGGQKVRMVCVPTFASTGQAALLDLETLDCTPLRF 1611
M GGG + V +S S I + A+ G ED G G R E L+Y P YQRF K ++FTQQ+SH+Y RL ++ + AA +W + +++++ +G + VIGT +K M LRPS+L+E+R++ + A+ G ++TS +D+LVLEDESGRV++SG + V+G+V+A KG G V+D C AG+P P + P +V+L+SGL++ + D L + LL+D+V G+ G A ++ +RIGRVIV GD +A A +L K + ++QQ A P +D++LA LA+A PVDVMPG DP+N+TLPQQP+H C+L +ASR+ S K V NP+EA + R+FLG++GQ D+ R T + A L +E+TL WRH+APTAP+TL CYPF +DPF++ P +YFAGNQP FA L+E G G+K +V VP+FA TG L++L L TPL F
Sbjct: 1 MAGGG----DFVDMSTSSVITSDAMLDSILQNGEEDPGNQDGRERSEEKLQRVTLSYTPTYQRFRAKARTFTQQYSHMYTNRLRLMRPMLEAAATAKWGTGAPDGKEGEDAPTLCQKIIDLVDGARTSMVIGTIFKDMPLRPSLLDEYRDEAALQGALQPAPGPDTNYTSSEDTLVLEDESGRVTLSGEALPVGDFVTGLVVAAKGRA-VGGRFFVEDVCAAGMPEQEAGPEGXXXXXXXXXXXGGRGREPQ-YVMLMSGLRLSDRSDLLPLQLLIDYVQGHAGTADEKRRLVSRIGRVIVAGDLLAPFEASILK-----EKHMTSKQQEEFALPFKHVDLVLAQLASAVPVDVMPGADDPSNHTLPQQPIHPCILPHASRYASFKTVPNPYEAWLQRRLFLGNAGQIPADLARSTAPPSLPSSPASSAARTLDLMEKTLHWRHLAPTAPDTLACYPFCDDDPFVLPSLPHVYFAGNQPAFAARLVEEGKEGGAEGKEGKKCLLVAVPSFAETGTVVLVNLSDLTATPLHF 520
BLAST of mRNA_C-linearis_contig7.14469.1 vs. uniprot
Match: A0A2K1KWA5_PHYPA (Uncharacterized protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KWA5_PHYPA) HSP 1 Score: 335 bits (860), Expect = 6.600e-104 Identity = 184/459 (40.09%), Postives = 279/459 (60.78%), Query Frame = 1
Query: 247 PLGAPRIELAYEPRYQRFIVKNKSFT-QQFSHVYNKRLLGLKAAVRRAAEERWXXXXXAKGSSKGGVKFVDRLVNMKEGDEWAVIGTTYKTMKLRPSILNEFREDRGISMAVVAPVGSFTSEDDSLVLEDESGRVSISGPGIQCQSLVSGMVIAVKGTVKASGEMVVDDWCPAGLPPPVPPPSKNPAGFVLLVSGLQVGGKH-DPLLVSLLVDFVAGYLGGAGDQESTSARIGRVIVCGDSVAASSAELLNAGTGPSKRLNAEQQRLVASPMNELDVILALLAAAAPVDVMPGESDPANYTLPQQPVHQCLLRNASRFGSLKRVTNPHEAKIGDRVFLGSSGQPLKDMDRYTTVDAEAEDAQKPACLRRLEETLEWRHMAPTAPETLGCYPFVTEDPFIIEECPDIYFAGNQPQFATSLLEGPGGQKVRMVCVPTFASTGQAALLDLETLDCTPLRFSS 1617
P PR+ Y + Q++ + + + QQ+S +Y R++ ++ + +ERW V ++ ++E VIGT YK M+L+PS+L+E+ ++R S+ +A FT +DD L+LEDESGRV ++G + V+G+V+A+ G + GE V+D AGLPP P + + FVL VSGL++GG +PL + LLVD + G+LG +Q S S++I R+++ G S+ L + ++A+ Q + P+ ELD+ L ++AA PVD+MPG +DPAN++LPQQP+H+CL A+ + + TNPH+ ++ D +FLG+SGQ + D+ +Y+ EAED L +E TL WRH+APTAP+TLGCYPF+ DPFI+E CP +YF GNQP +A+ LL GP QKVR+VC+P F T A L++L LDC L+ S+
Sbjct: 10 PATIPRLHAPYVSQDQKYGLSMQRYKGQQYSQLYFIRIVTIRQHLTPCIQERWPSLP------------VCNILALEEDKACVVIGTLYKQMQLKPSVLDEYSKER--SVVPLASPNKFTHKDDYLILEDESGRVKLTGSAVLSSMYVTGVVVAIVGREEKDGEFFVEDVMVAGLPPQKPLKNSDVDKFVLFVSGLKIGGHGTNPLDLQLLVDHLTGHLGEVQEQ-SLSSQIVRMVIAGGSLD------LQTSISNGQPMSAKNQSKLVEPVKELDLALTQISAAMPVDIMPGANDPANFSLPQQPLHKCLFPGATMYNTFVSATNPHQFELDDVLFLGTSGQNIDDLSKYS----EAEDR-----LDFMERTLMWRHLAPTAPDTLGCYPFIDRDPFILETCPHVYFCGNQPHYASRLLTGPSAQKVRLVCIPEFHKTSTAVLVNLRNLDCHVLKLST 438
BLAST of mRNA_C-linearis_contig7.14469.1 vs. uniprot
Match: A0A6J2QCS0_COTGO (DNA polymerase delta subunit 2 n=12 Tax=Perciformes TaxID=8111 RepID=A0A6J2QCS0_COTGO) HSP 1 Score: 329 bits (843), Expect = 5.050e-101 Identity = 189/464 (40.73%), Postives = 284/464 (61.21%), Query Frame = 1
Query: 232 EDGGAPLGAPRIELAYEPRYQRFIVKNKSFTQQFSHVYNKRLLGLKAAVRRAAEERWXXXXXAKGSSKGGVKFVDRLVNMKEGDEWAVIGTTYKTMKLRPSILNEFREDRGISMAVVAPVGSFTSEDDSLVLEDESGRVSISGPGIQCQSLVSGMVIAVKGTVKASGEMVVDDWCPAGLPPPVPPPSKNPAGFVLLVSGLQVGGKH-DPLL-VSLLVDFVAGYLGGAGDQESTSARIGRVIVCGDSVAASSAELLNAGTGPSKRLNAEQQRLVASPMNELDVILALLAAAAPVDVMPGESDPANYTLPQQPVHQCLLRNASRFGSLKRVTNPHEAKIGDRVFLGSSGQPLKDMDRYTTVDAEAEDAQKPACLRRLEETLEWRHMAPTAPETLGCYPFVTEDPFIIEECPDIYFAGNQPQFATSLLEGPGGQKVRMVCVPTFASTGQAALLDLETLDCTPLRFSS 1617
ED G P+ R+ LAY P +R+ V +SF++Q++H+Y RL+ ++ + A+++W G + +L +++ G++ ++GT +K M+L+PSIL E E+ + SE D L+LEDE R+ + G I V+G VIA+ G K G+ V+D+C A LPP P P+ + FVLLVSGL +G H D +L + LLVD V G LG G+Q S +A I RV++ G+ ++ S+ + +A P K L + Q + LD +L LAA+ PVDVMPG+ DP NYTLPQQP+H+C+ +S + +L+ V+NPH++ I FLG+SGQ + D+ +Y+++D L LE TL RH+APTAP+TLGC+PF +DPFI+EECP++YF+GN P F + L++GP GQ+V +V +P F+ST A L++L TL C P+ FS+
Sbjct: 20 EDQGGPV-FERMSLAYSPCSERYTVGERSFSRQYAHIYAARLMQMRPLLSERAQQKW-----------GSDVLIRKLCDLQTGEQCCIVGTLFKRMELQPSILKEISEEHNLLPQPAR--AKLISETDELILEDELQRIKLEGK-IDRDICVTGSVIAIYGAEKNDGKFTVEDFCMADLPPQTPRPALSSDRFVLLVSGLGLGSSHADSMLGLQLLVDMVTGQLGDQGEQ-SGAATISRVLLAGNLLSQSTQDS-DAAKKP-KYLTKKTQAGSVEAIRLLDELLLQLAASVPVDVMPGQYDPTNYTLPQQPLHRCMFPLSSVYPTLQLVSNPHQSIIDGVRFLGTSGQNVCDIQKYSSMDRH---------LEILENTLRLRHLAPTAPDTLGCFPFYQKDPFILEECPNVYFSGNAPTFESKLIKGPDGQEVLLVTIPDFSSTQTACLVNLRTLACEPVSFSA 456
BLAST of mRNA_C-linearis_contig7.14469.1 vs. uniprot
Match: A0A7S0RED1_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0RED1_9CHLO) HSP 1 Score: 327 bits (837), Expect = 3.870e-100 Identity = 198/492 (40.24%), Postives = 287/492 (58.33%), Query Frame = 1
Query: 178 EDVLLSPPSSIDA----TAVGGEDGGAPLGAP--RIELAYEPRYQRFIVKNKSFTQQFSHVYNKRLLGLKAAVRRAAEERWXXXXXAKGSSKGGVKFVDRLVNMKEGDEWAVIGTTYKTMKLRPSILNEFREDRGISMAVVAPVGSFTSEDDSLVLEDESGRVSISGPGIQCQSLVSGMVIAVKGTVKASGEMVVDD--WCPAGLPPPVPPPSKNPAG----FVLLVSGLQVGGKHDPLLVSLLVDFVAGYLGGAGDQESTSARIGRVIVCGDSVAASSAELLNAGTGPSKRLNAEQQRLVASPMNELDVILALLAAAAPVDVMPGESDPANYTLPQQPVHQCLLRNASRFGSLKRVTNPHEAKIGDRVFLGSSGQPLKDMDRYTTVDAEAEDAQKPACLRRLEETLEWRHMAPTAPETLGCYPFVTEDPFIIEECPDIYFAGNQPQFATSLLEGPGGQKVRMVCVPTFASTGQAALLDLETLDCTPLRFSS 1617
+D++ PS+ D T + A P R Y + RFIV+ KSF +Q++ +Y RL+ VR A +E++ AK ++++++G E ++GT YK M L+P+IL+E+ ++R + V A TS+ D+LVLEDE RV +SG + V+G+V+AVKGT + G V D + P G VP P + AG +V LVSGLQ+GG +PL LL+D + G LG + DQE SAR+ RV++ GDS A ++ + +LN +QQ + +P+ ELD+ LA LAAA PVDVMPG +D N +LPQQP+H+ L A+R+ + + VTNP+E D FLG+SGQ + D+ +Y V+ L LE T W+H+APTAP+TL YPF DPFI+E+ P +YF GNQP+FAT ++ GP GQ R++ +P FA +G A L++L+TL C PL FS+
Sbjct: 3 QDMVFEAPSAQDCDGFDTMLSARKDDAMEVEPMTRETSKYLNKSARFIVEKKSFKEQYAQLYFTRLMLTSPRVREAIKEKFPEAKVAK------------ILDLEDGQECVIVGTLYKDMLLKPTILDEYTKERSVEPLVRA--SKLTSDSDTLVLEDEGARVRLSGEALDLAKHVTGIVVAVKGTAERDGNFTVSDVLYAPPGPQAAVPLPREVGAGTSGRYVALVSGLQLGGGGNPLPAQLLIDHLCGLLGSSPDQE-LSARVVRVVLAGDSFAPGVNQVA------AGKLNKKQQADMKAPLLELDLGLAQLAAAMPVDVMPGPADFTNVSLPQQPMHRVLFPGAARYSTFQGVTNPYEFDCEDISFLGTSGQNVDDLYKYCDVEDR---------LDLLEATWRWQHLAPTAPDTLATYPFSDRDPFIVEQAPHVYFVGNQPEFATRVVTGPAGQVTRLLALPRFADSGMAVLVNLDTLACHPLVFST 464
BLAST of mRNA_C-linearis_contig7.14469.1 vs. uniprot
Match: B5X3P2_SALSA (DNA polymerase delta subunit 2 n=19 Tax=Salmonidae TaxID=8015 RepID=B5X3P2_SALSA) HSP 1 Score: 326 bits (836), Expect = 5.950e-100 Identity = 184/471 (39.07%), Postives = 277/471 (58.81%), Query Frame = 1
Query: 229 GEDGGAPLGAPRIELAYEPRYQRFIVKNKSFTQQFSHVYNKRLLGLKAAVRRAAEERWXXXXXAKGSSKGGVKFVDRLVNMKEGDEWAVIGTTYKTMKLRPSILNEFREDRGISMAVVAPVGSFTSEDDSLVLEDESGRVSISGPGIQCQSLVSGMVIAVKGTVKASGEMVVDDWCPAGLPPPVPPPSKNPAGFVLLVSGLQVGGKH--DPLLVSLLVDFVAGYLGGAGDQESTSARIGRVIVCGDSVAASSAELLNAGTGPSKRLNAEQQRLVASPMNELDVILALLAAAAPVDVMPGESDPANYTLPQQPVHQCLLRNASRFGSLKRVTNPHEAKIGDRVFLGSSGQPLKDMDRYTTVDAEAEDAQKPACLRRLEETLEWRHMAPTAPETLGCYPFVTEDPFIIEECPDIYFAGNQPQFATSLLEGPGGQKVRMVCVPTFASTGQAALLDLETLDCTPLRFSSAVGGVD 1635
G + P R++ AY P +RF + +SF +Q++H+Y RL+ + + A+++W G + +L +++ G++ ++GT +K M+L+PSIL E E+ ++ P + S+ D L+LEDE R+ + G I V+G VIA+ G K G+ VDD+C A LPP P + + FVLL+SGL +GG H L + LLVD V G+LG G+Q S I RV++ G+ ++ S+ + +A T +K L + Q M LD +L L ++ PVDVMPG+ DP NYTLPQQP+H C+ +S + +L +NPH+A + LG+SGQ +KD+ +Y+++D+ L LE TL RH+APTAP+TLGCYPF +DPFI+EECP +YF+GN P + + G GQ+V +V +P F+ST A L++L TL+C P+RFSS G D
Sbjct: 21 GSEDQEPSVFDRVKPAYSPCSERFKLGERSFNRQYAHIYATRLMQMSPLLTERAQQKW-----------GADVRIRKLCDLQMGEQCCIVGTLFKHMELQPSILKEISEEH--NLLPQPPRTRYISDSDELILEDELQRIKLEG-NIDVDKFVTGSVIAIYGAEKNDGKFTVDDFCTADLPPQTPRTTLSSDRFVLLLSGLGLGGSHADSMLALQLLVDMVTGHLGDQGEQSGAST-ISRVLLAGNLLSQSTQDK-DAST-KAKYLTKKTQAGTVDAMRLLDEMLMQLVSSVPVDVMPGQYDPTNYTLPQQPLHHCMFPLSSTYPTLLLASNPHQATLDGVRILGTSGQNVKDIQKYSSMDSH---------LEILENTLRLRHLAPTAPDTLGCYPFYLKDPFILEECPHVYFSGNAPSYQAKRITGAEGQEVLLVAIPEFSSTQTACLINLRTLECEPIRFSSFSAGDD 465
BLAST of mRNA_C-linearis_contig7.14469.1 vs. uniprot
Match: A0A2R6X3B9_MARPO (Uncharacterized protein n=1 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X3B9_MARPO) HSP 1 Score: 325 bits (832), Expect = 1.300e-99 Identity = 185/461 (40.13%), Postives = 273/461 (59.22%), Query Frame = 1
Query: 259 PRIELAYEPRYQRFIVKNKSFT-QQFSHVYNKRLLGLKAAVRRAAEERWXXXXXAKGSSKGGVKFVDRLVNMKEGDEWAVIGTTYKTMKLRPSILNEFREDRGISMAVVAPVGSFTSEDDSLVLEDESGRVSISGPGIQCQSLVSGMVIAVKGTVKASGEMVVDDWCPAGLPPPVPPPSKNPAG---FVLLVSGLQVGGKH-DPLLVSLLVDFVAGYLGGAGDQESTSARIGRVIVCGDSVAASSAELLNAGTGPSKRLNAEQQRLVASPMNELDVILALLAAAAPVDVMPGESDPANYTLPQQPVHQCLLRNASRFGSLKRVTNPHEAKIGDRVFLGSSGQPLKDMDRYTTVDAEAEDAQKPACLRRLEETLEWRHMAPTAPETLGCYPFVTEDPFIIE-ECPDIYFAGNQPQFATSLLEGPGGQKVRMVCVPTFASTGQAALLDLETLDCTPLRFSSAV 1623
PR++ Y ++F +K + + QQ+S +Y RL + + +ERW V ++ + EG VIGT YK MKL+P+IL+E+ ++R + VV +FT +D L+LEDESGRV + G I V+G+V+AV G GE +V++ GL P P P++ + +V VSGL+ GG +PL V LLVD + G+LG +Q S SA++ R I+ GDSV L A + L+++ Q + P+ ELD++L LA+A PVD+MPG DPAN++LPQQP+H+CL A+ + + TNPH+ ++ FLG+SGQ ++D+D+Y+ D + +E TL WRH+APTAP+TLGCYPF DPF+IE CP +YF GNQ +F+T L+ GP G+ VR+VC+P FA TG A L+ L TL+C + S+++
Sbjct: 10 PRVQATYVSHNEKFELKKQKYKGQQYSQLYFFRLTFTRQYLNPRIKERWPSY------------IVTNILGLDEGKVCVVIGTLYKQMKLKPNILDEYSKERSVGGLVVP--SNFTDAEDYLILEDESGRVKLVGDCISPAVYVTGVVVAVCGQPGKDGEFLVEEILEPGLAPQPPLPTRKKSESEKYVAFVSGLRCGGPETNPLQVQLLVDHLTGHLGEEQEQ-SLSAQVVRTIIAGDSVQ------LQAQALHGQPLSSKDQHKLIEPIKELDLVLTQLASAMPVDIMPGSKDPANFSLPQQPLHKCLFPGATAYSTFVSATNPHQFELDGVGFLGTSGQNIEDLDKYSLADDPVD---------YMERTLSWRHIAPTAPDTLGCYPFHDRDPFLIEPSCPHVYFCGNQDKFSTRLIRGPKGEMVRLVCIPRFAETGTAVLVSLSTLECHCVTLSTSL 440 The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig7.14469.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-linearis_contig7.14469.1 >prot_C-linearis_contig7.14469.1 ID=prot_C-linearis_contig7.14469.1|Name=mRNA_C-linearis_contig7.14469.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=525bp MKGGGGERGEDVLLSPPSSIDATAVGGEDGGAPLGAPRIELAYEPRYQRFback to top mRNA from alignment at C-linearis_contig7:2293033..2301902+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-linearis_contig7.14469.1 ID=mRNA_C-linearis_contig7.14469.1|Name=mRNA_C-linearis_contig7.14469.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=8870bp|location=Sequence derived from alignment at C-linearis_contig7:2293033..2301902+ (Chordaria linearis ClinC8C monoicous)back to top Coding sequence (CDS) from alignment at C-linearis_contig7:2293033..2301902+ >mRNA_C-linearis_contig7.14469.1 ID=mRNA_C-linearis_contig7.14469.1|Name=mRNA_C-linearis_contig7.14469.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=3150bp|location=Sequence derived from alignment at C-linearis_contig7:2293033..2301902+ (Chordaria linearis ClinC8C monoicous)back to top |