prot_C-linearis_contig112.1547.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig112.1547.1
Unique Nameprot_C-linearis_contig112.1547.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length1033
Homology
BLAST of mRNA_C-linearis_contig112.1547.1 vs. uniprot
Match: A0A6H5J9W3_9PHAE (UBC core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9W3_9PHAE)

HSP 1 Score: 922 bits (2382), Expect = 0.000e+0
Identity = 612/1029 (59.48%), Postives = 673/1029 (65.40%), Query Frame = 0
Query:    1 MDALKETLLRSDFDRVRQHPKYKGANVQTKDGSIFKWALAVPGGRGTSWEGLVYDLVVTFSRRHPFEPPRVDFPRSHRNVSNPTHPLIDGSGRLRVQRLSPDKWLPTIDASQVVGWLYHLFETEPPSVTSGNRCPFTHLSSETVLQVHTFLDAEDLGRLSQTSKHMLSLCFDEATWAKLYYRSCSSLDGLLGEKEGGACPVRVMGVSGKWFWEGSREAFIRSWEMRNACSRRAFASTKTQELHVRWELGGLMTVAAGLLSDITSRRQNTTPAAGVMAHLGHMEHILDNLTMRIASLQRLMAWPGVCRGLLPENDEDSSLPIGLWDRP-----------------------AGSGGGXXXXXXXGELNGREARLSPEQREALRMLLGNLASHPATARSRRWRRXXXXXXXXXXXXXXXXXXXXXXXAD------------VTSRVPSEGCPHHHHTIPGPTIPFGMGGVELPTRYGGKSRFVNALGAIATAXXXXXXXXXXXSLAGHGGPIAPGSPHHGGGSTLQNAQPACSMGGLFWPTLYDFTIAKRRQRERLRDSFRKFSRGQKLDVRDPSGVWMGAEVVWAPREDSGGGSTATAXXXXXXXXXXXXXXXXXDXXXXXAHGGGQHGV------------LGG---GADPGTPEWRRLLQMGLMVDGGHMGMHANPQAVFAAANAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAAMHPGAGANNGHVANDQGASSVAMSDSGDWVTTGAVDIAQVHLTSAVTAAADSRG---------------LSTWSRKKAGASSSTAPFSSTPPAP------------------------------GNGMTPNPVEAVPAGNSRKSILVHYEGHKSKYDEWINVQSPRLAPFRSRTTRPLSVTMQSVERVVNGASVSCSRGVPAPDCVEISMSCPWISHCAGGGVVTYLLPRSTILGAVLADFCHLAGISLWRSTVQRARLHMAADIRNGSCAVEELDDRRTLEYLDINSGAVLLVCVAPAAKDILPAGRQCVPP 934
            M+ALKE LLR DFD VRQHPKY+ ANV+T++GSI KW L VPGG+GTSWEGLVYDL VTFSRRHPFEPPRVDFPR+HRNVSNP HPL+D +G LR+Q+LSPDKWLPTI+ASQV+ WL+HLFETEPP VTSGN CPFTHLSSETVLQVH FLDA DLGRLSQTSKHMLSLCFDEATWAKLYYRSC+SLDGLLGEKEGGACPVRVMG SGKWFWEGSREAFIRSWEMR ACS  AF++ KTQELHV+WEL GL+TVAAGLL DI  RR      A    +L HME +LD+LTMR+ASLQRLMAWPGVCRGLL E DED SLPI  W RP                       A     XXXXXXX + +GREARL+PEQREA+R+L GNLA+ P   R      XXXXXXXXXXXXXXXXXXXXXXX               T+R P EG P+HHHT+ GP IP+GMG VELP R GG+   V A       XXXXXXXXXXX                 G +TLQNAQPAC MGGLFWPTLYD T AKRRQRERLR+ FRKFSRGQ+LDV DPSGVWMGAEV+WAP  D G G+            XXXXXXXXX        G                  L G   G + G PEWRR+LQ+GLM D G    H N           XXXXXXXXXXXXXXXXXXXXXXXXXXX                              WVTT A   +Q                              L+ W+   AGA+                                           G G T       P G++RK + VHYEGHK KYDEWI+VQS RLAPFRSRTTRPLSVTMQ VE+VV GASVS SRGVPAPDCVEI MSCPW+SHCAGGGVVTY LPRST L  VLADFCHLA ISL R+TV+RARL +A+D R+G C  EELDD RTLEYL++ SG+VLLVCVAP  KD+ PAG  CV P
Sbjct:  104 MEALKEQLLRDDFDEVRQHPKYQTANVRTEEGSILKWILDVPGGKGTSWEGLVYDLKVTFSRRHPFEPPRVDFPRTHRNVSNPGHPLVDANGCLRMQKLSPDKWLPTIEASQVISWLFHLFETEPPCVTSGNSCPFTHLSSETVLQVHAFLDAGDLGRLSQTSKHMLSLCFDEATWAKLYYRSCTSLDGLLGEKEGGACPVRVMGASGKWFWEGSREAFIRSWEMRKACSSAAFSTAKTQELHVKWELSGLLTVAAGLLYDIQDRRLGDAFPAANAGYLRHMERVLDSLTMRVASLQRLMAWPGVCRGLLSEKDEDRSLPIDAWGRPGQQRRSPSPSPXXHEKHHRCNAGADXXXXXXXXXXXXDSSGREARLTPEQREAMRLLFGNLAALPVARRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATARTPPEGFPYHHHTVAGPCIPYGMGRVELPARVGGEPPQVLAAXXXXXXXXXXXXXXXXXXXXXX---------XXSGCATLQNAQPACGMGGLFWPTLYDLTAAKRRQRERLRECFRKFSRGQRLDVLDPSGVWMGAEVMWAPG-DGGVGTLRVGGWGEDGGAXXXXXXXXXXAPAAEVAGXXXXXXXXXXXXXXXXXPLAGYPVGGNGGMPEWRRVLQLGLMADSGQAAPHPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XWVTTEAPKASQSLXXXXXXXXXXXXXXXXXXXXXXXXXXPVLANWN-PGAGAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVFGQGGT------TPPGSNRKLVRVHYEGHKKKYDEWISVQSGRLAPFRSRTTRPLSVTMQFVEQVVKGASVSSSRGVPAPDCVEIFMSCPWVSHCAGGGVVTYRLPRSTKLCGVLADFCHLADISLRRATVKRARLFLASDFRDGCCDGEELDDHRTLEYLNVTSGSVLLVCVAPTVKDLAPAGSLCVSP 1106          
BLAST of mRNA_C-linearis_contig112.1547.1 vs. uniprot
Match: D7FVT1_ECTSI (Ubiquitin-conjugating enzyme E2W n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVT1_ECTSI)

HSP 1 Score: 706 bits (1821), Expect = 6.250e-241
Identity = 456/828 (55.07%), Postives = 499/828 (60.27%), Query Frame = 0
Query:    1 MDALKETLLRSDFDRVRQHPKYKGANVQTKDGSIFKWALAVPGGRGTSWEGLVYDLVVTFSRRHPFEPPRVDFPRSHRNVSNPTHPLIDGSGRLRVQRLSPDKWLPTIDASQVVGWLYHLFETEPPSVTSGNRCPFTHLSSETVLQVHTFLDAEDLGRLSQTSKHMLSLCFDEATWAKLYYRSCSSLDGLLGEKEGGACPVRVMGVSGKWFWEGSREAFIRSWEMRNACSRRAFASTKTQELHVRWELGGLMTVAAGLLSDITSRRQNTTPAAGVMAHLGHMEHILDNLTMRIASLQRLMAWPGVCRGLLPENDEDSSLPIGLWDRPAGSGGGXXXXXXXGELNGREARLSPEQREALRMLLGNLASHPATARSRRWRRXXXXXXXXXXXXXXXXXXXXXXXADVTSRVPSEGCPHHHHTIPGPTIPFGMGGVELPTRYGGKSRFVNALGAIATAXXXXXXXXXXXSLAGHGGPIAPGSPHHGGGSTLQNAQPACSMGGLFWPTLYDFTIAKRRQRERLRDSFRKFSRGQKLDVRDPSGVWMGAEVVWAP--------REDSGGGSTATAXXXXXXXXXXXXXXXXXDXXXXXAHGGGQHGVLGGGADPGTPEWRRLLQMGLMVDGGHMGMHANPQAVFAAANAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAAMHPGAGANNGHVANDQGASSVAMSDSGDWVTTGAVDIAQVHLTSAVTAAADSRGLSTWSRKKAGASSSTAPFSSTPPAPGNGMTPNPVEAVPAGNSRKSILVHYEGHKSKYDEWINVQSPRLAPFRSRTTRPLSVTMQSVERVVNGASVS-CSR 819
            M+ALKE LLRSDFD+VRQHPKY+ ANV+T++GSIFKW L VPGG+GTSWEGLVYDL VTFSRRHPFEPPRVDFPR+HRNVSNP HPL+D +GRLR+Q+LS DKWLPTI+ASQV+GWL+HLFETEPP VTSGN CPFTHLSSETVLQVHTFLDA DLGRLSQTSKHMLSLCFDEATWAKLYYRSC+SLDGLLGEKEGGACPVRVMG SGKWFWEGSREAFIRSWEMR ACS  AF++ KTQELHV+WEL GL+TVAAGLL DI +RR      A    +L HME +LD+LTMR+ASLQRLMAWPGVCRGLL E DED SLPI +W RP                         +QR                                                    R PS     H               VELP R GG+   V A       XXXXXXXXXXX                 G +TLQNAQPAC MGGLFWPTLYD   AKRRQRERLR+ FRKFSRGQKLDVRDPSGVWMGAEV+WAP        R D  G      XXXXXXXXXXXXXXXXX XXXXX            G D G PEWRRLLQ+GLM DGG     + P A+                                  A  +PGAGA            ++A   +G                                     A      F       G G T       P G++RK + VHYEGHK KYDEWI+VQS RLAPFRSRTTRPLSVTMQ VE+VVNGASVS C R
Sbjct:    1 MEALKEKLLRSDFDQVRQHPKYQTANVRTEEGSIFKWILDVPGGKGTSWEGLVYDLEVTFSRRHPFEPPRVDFPRTHRNVSNPGHPLVDANGRLRMQKLSFDKWLPTIEASQVIGWLFHLFETEPPCVTSGNSCPFTHLSSETVLQVHTFLDAGDLGRLSQTSKHMLSLCFDEATWAKLYYRSCTSLDGLLGEKEGGACPVRVMGASGKWFWEGSREAFIRSWEMRKACSSAAFSTAKTQELHVKWELSGLLTVAAGLLHDIQNRRLGDVFPAANAGYLRHMERVLDSLTMRVASLQRLMAWPGVCRGLLSEKDEDGSLPIDVWGRPG------------------------QQR----------------------------------------------------RSPSXXXXXHEK----------QHRVELPARVGGEPPQVLAXXXXXXXXXXXXXXXXXXXXXXX---------XXSGWATLQNAQPACGMGGLFWPTLYDLMAAKRRQRERLRECFRKFSRGQKLDVRDPSGVWMGAEVMWAPGDGGVGTLRADGCGEDGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFAGSPVGGDAGMPEWRRLLQLGLMADGGRALPGSPPPAL----------------------------------ANWNPGAGA------------TLAAVPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA----LVF-------GQGGT------TPPGSNRKLVRVHYEGHKKKYDEWISVQSGRLAPFRSRTTRPLSVTMQFVEQVVNGASVSRCQR 670          
BLAST of mRNA_C-linearis_contig112.1547.1 vs. uniprot
Match: UPI00174F60B0 (SUMO-conjugating enzyme UBC9-like n=1 Tax=Pipistrellus kuhlii TaxID=59472 RepID=UPI00174F60B0)

HSP 1 Score: 59.7 bits (143), Expect = 1.270e-6
Identity = 37/102 (36.27%), Postives = 53/102 (51.96%), Query Frame = 0
Query:   17 RQHP-KYKGANVQTKDGSI--FKWALAVPGGRGTSWEGLVYDLVVTFSRRHPFEPPRVDFPRSHRNVSNPTHPLIDGSGRLRVQRLSPDK-WLPTIDASQVV 114
            R HP  +     + +DG++   KW  AVPG RGT+WEG ++ L ++F   +PF PP   F      V    HP +  SG + +  L+ DK W P I   QV+
Sbjct:   18 RDHPFGFVAVPTKNRDGTLNLMKWKCAVPGKRGTAWEGGLFKLRLSFKEDYPFSPPTCQF------VPPLFHPNVYPSGVVCLSILNEDKDWRPGITIKQVL 113          
BLAST of mRNA_C-linearis_contig112.1547.1 vs. uniprot
Match: A0A7I4Z514_HAECO (UBC core domain-containing protein n=1 Tax=Haemonchus contortus TaxID=6289 RepID=A0A7I4Z514_HAECO)

HSP 1 Score: 55.1 bits (131), Expect = 6.270e-5
Identity = 36/138 (26.09%), Postives = 64/138 (46.38%), Query Frame = 0
Query:   33 SIFKWALAVPGGRGTSWEGLVYDLVVTFSRRHPFEPP--RVDFPRSHRNVSNPTHPLIDGSGRLRVQRLSPDK-WLPTIDASQVVGWLYHLFETEPPSVTSGNRCPFTHLSSETVLQVHTFLDAEDLGRLSQTSKHML 167
            ++FKW  AVPG +GT WEG +Y + + F+  +P  PP  + D P  H NVS         +GR+ +  L  D+ W P I   +V+  ++   +   P+  + +     ++ +    +     DA  + R  +    M+
Sbjct:   37 NLFKWICAVPGKKGTIWEGGLYKIHIYFNDAYPSTPPICKFDPPVYHPNVSY--------TGRICLSILYEDQGWKPAISLKEVLIGIHDFLDDPNPNDPAQDDASLVYVRNRAAYEERVRRDARTIFRPDRVLAQMM 166          
BLAST of mRNA_C-linearis_contig112.1547.1 vs. uniprot
Match: A0A7R9YNM5_DIALT (Hypothetical protein (Fragment) n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YNM5_DIALT)

HSP 1 Score: 54.3 bits (129), Expect = 6.970e-5
Identity = 38/116 (32.76%), Postives = 57/116 (49.14%), Query Frame = 0
Query:   31 DGS--IFKWALAVPGGRGTSWEGLVYDLVVTFSRRHPFEPPRVDFPRSHRNVSNPT--HPLIDGSGRLRVQRLSPDK-WLPTIDASQVVGWLYHLFETEPPSVTSGNRCPFTHLSS 141
            DGS  I  W  AVPG +GT WEG +Y + + FS  +P +PP+  F        NP   HP +  SG + +  L  +K W P+I   Q++  +  L +  P +     R P+  L +
Sbjct:   37 DGSFNIMLWECAVPGKKGTDWEGGLYRITMEFSDEYPSKPPKCKF--------NPRIFHPNVYPSGTICLSILDENKGWKPSITVKQMLLGIQDLLDN-PNNNDPAQREPYDLLKN 143          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig112.1547.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5J9W3_9PHAE0.000e+059.48UBC core domain-containing protein n=1 Tax=Ectocar... [more]
D7FVT1_ECTSI6.250e-24155.07Ubiquitin-conjugating enzyme E2W n=1 Tax=Ectocarpu... [more]
UPI00174F60B01.270e-636.27SUMO-conjugating enzyme UBC9-like n=1 Tax=Pipistre... [more]
A0A7I4Z514_HAECO6.270e-526.09UBC core domain-containing protein n=1 Tax=Haemonc... [more]
A0A7R9YNM5_DIALT6.970e-532.76Hypothetical protein (Fragment) n=2 Tax=Diacronema... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 983..1003
NoneNo IPR availableSMARTSM00212ubc_7coord: 7..149
e-value: 0.0011
score: 16.0
NoneNo IPR availableGENE3D2.30.30.140coord: 750..797
e-value: 5.4E-8
score: 34.6
NoneNo IPR availableGENE3D1.20.1280.50coord: 129..240
e-value: 1.1E-7
score: 33.7
NoneNo IPR availablePANTHERPTHR24067UBIQUITIN-CONJUGATING ENZYME E2coord: 5..126
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10coord: 1..128
e-value: 2.4E-14
score: 55.2
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 12..126
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 12..123
e-value: 2.6E-14
score: 53.0
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBIQUITIN_CONJUGAT_2coord: 7..127
score: 16.092
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 129..187
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 761..792

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig112contigC-linearis_contig112:396684..406032 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig112.1547.1mRNA_C-linearis_contig112.1547.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig112 395618..406127 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig112.1547.1 ID=prot_C-linearis_contig112.1547.1|Name=mRNA_C-linearis_contig112.1547.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1033bp
MDALKETLLRSDFDRVRQHPKYKGANVQTKDGSIFKWALAVPGGRGTSWE
GLVYDLVVTFSRRHPFEPPRVDFPRSHRNVSNPTHPLIDGSGRLRVQRLS
PDKWLPTIDASQVVGWLYHLFETEPPSVTSGNRCPFTHLSSETVLQVHTF
LDAEDLGRLSQTSKHMLSLCFDEATWAKLYYRSCSSLDGLLGEKEGGACP
VRVMGVSGKWFWEGSREAFIRSWEMRNACSRRAFASTKTQELHVRWELGG
LMTVAAGLLSDITSRRQNTTPAAGVMAHLGHMEHILDNLTMRIASLQRLM
AWPGVCRGLLPENDEDSSLPIGLWDRPAGSGGGSGGNGGGGELNGREARL
SPEQREALRMLLGNLASHPATARSRRWRRRGRAAAAEVAGEGAGAAAGAG
VAADVTSRVPSEGCPHHHHTIPGPTIPFGMGGVELPTRYGGKSRFVNALG
AIATAAAAGAGGGGGGSLAGHGGPIAPGSPHHGGGSTLQNAQPACSMGGL
FWPTLYDFTIAKRRQRERLRDSFRKFSRGQKLDVRDPSGVWMGAEVVWAP
REDSGGGSTATAAAAAAAAGAAGAAGAAGDGGAGAAHGGGQHGVLGGGAD
PGTPEWRRLLQMGLMVDGGHMGMHANPQAVFAAANAAAANADAVAAVAAA
DAAATAAATAANAAAAMHPGAGANNGHVANDQGASSVAMSDSGDWVTTGA
VDIAQVHLTSAVTAAADSRGLSTWSRKKAGASSSTAPFSSTPPAPGNGMT
PNPVEAVPAGNSRKSILVHYEGHKSKYDEWINVQSPRLAPFRSRTTRPLS
VTMQSVERVVNGASVSCSRGVPAPDCVEISMSCPWISHCAGGGVVTYLLP
RSTILGAVLADFCHLAGISLWRSTVQRARLHMAADIRNGSCAVEELDDRR
TLEYLDINSGAVLLVCVAPAAKDILPAGRQCVPPPPRDNDGDGEFFMARR
RWASSGEDGDGGAGDDLGGDIGQLLSSDENGDEDEEEEEEEDTEREVTEE
DSDVADIEAKTSVFGGGGSSGSGGGGRGSGGA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016135UBQ-conjugating_enzyme/RWD
IPR000608UBQ-conjugat_E2
IPR036047F-box-like_dom_sf
IPR016197Chromo-like_dom_sf