mRNA_C-linearis_contig112.1547.1 (mRNA) Chordaria linearis ClinC8C monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-linearis_contig112.1547.1
Unique NamemRNA_C-linearis_contig112.1547.1
TypemRNA
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Homology
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BLAST of mRNA_C-linearis_contig112.1547.1 vs. uniprot
Match: A0A6H5J9W3_9PHAE (UBC core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9W3_9PHAE)

HSP 1 Score: 923 bits (2386), Expect = 9.550e-314
Identity = 612/1029 (59.48%), Postives = 673/1029 (65.40%), Query Frame = 3 
Query:   96 MDALKETLLRSDFDRVRQHPKYKGANVQTKDGSIFKWALAVPGGRGTSWEGLVYDLVVTFSRRHPFEPPRVDFPRSHRNVSNPTHPLIDGSGRLRVQRLSPDKWLPTIDASQVVGWLYHLFETEPPSVTSGNRCPFTHLSSETVLQVHTFLDAEDLGRLSQTSKHMLSLCFDEATWAKLYYRSCSSLDGLLGEKEGGACPVRVMGVSGKWFWEGSREAFIRSWEMRNACSRRAFASTKTQELHVRWELGGLMTVAAGLLSDITSRRQNTTPAAGVMAHLGHMEHILDNLTMRIASLQRLMAWPGVCRGLLPENDEDSSLPIGLWDRP-----------------------AGSGGGXXXXXXXGELNGREARLSPEQREALRMLLGNLASHPATARSRRWRRXXXXXXXXXXXXXXXXXXXXXXXAD------------VTSRVPSEGCPHHHHTIPGPTIPFGMGGVELPTRYGGKSRFVNALGAIATAXXXXXXXXXXXSLAGHGGPIAPGSPHHGGGSTLQNAQPACSMGGLFWPTLYDFTIAKRRQRERLRDSFRKFSRGQKLDVRDPSGVWMGAEVVWAPREDSGGGSTATAXXXXXXXXXXXXXXXXXDXXXXXAHGGGQHGV------------LGG---GADPGTPEWRRLLQMGLMVDGGHMGMHANPQAVFAAANAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAAMHPGAGANNGHVANDQGASSVAMSDSGDWVTTGAVDIAQVHLTSAVTAAADSRG---------------LSTWSRKKAGASSSTAPFSSTPPAP------------------------------GNGMTPNPVEAVPAGNSRKSILVHYEGHKSKYDEWINVQSPRLAPFRSRTTRPLSVTMQSVERVVNGASVSCSRGVPAPDCVEISMSCPWISHCAGGGVVTYLLPRSTILGAVLADFCHLAGISLWRSTVQRARLHMAADIRNGSCAVEELDDRRTLEYLDINSGAVLLVCVAPAAKDILPAGRQCVPP 2897
            M+ALKE LLR DFD VRQHPKY+ ANV+T++GSI KW L VPGG+GTSWEGLVYDL VTFSRRHPFEPPRVDFPR+HRNVSNP HPL+D +G LR+Q+LSPDKWLPTI+ASQV+ WL+HLFETEPP VTSGN CPFTHLSSETVLQVH FLDA DLGRLSQTSKHMLSLCFDEATWAKLYYRSC+SLDGLLGEKEGGACPVRVMG SGKWFWEGSREAFIRSWEMR ACS  AF++ KTQELHV+WEL GL+TVAAGLL DI  RR      A    +L HME +LD+LTMR+ASLQRLMAWPGVCRGLL E DED SLPI  W RP                       A     XXXXXXX + +GREARL+PEQREA+R+L GNLA+ P   R      XXXXXXXXXXXXXXXXXXXXXXX               T+R P EG P+HHHT+ GP IP+GMG VELP R GG+   V A       XXXXXXXXXXX                 G +TLQNAQPAC MGGLFWPTLYD T AKRRQRERLR+ FRKFSRGQ+LDV DPSGVWMGAEV+WAP  D G G+            XXXXXXXXX        G                  L G   G + G PEWRR+LQ+GLM D G    H N           XXXXXXXXXXXXXXXXXXXXXXXXXXX                              WVTT A   +Q                              L+ W+   AGA+                                           G G T       P G++RK + VHYEGHK KYDEWI+VQS RLAPFRSRTTRPLSVTMQ VE+VV GASVS SRGVPAPDCVEI MSCPW+SHCAGGGVVTY LPRST L  VLADFCHLA ISL R+TV+RARL +A+D R+G C  EELDD RTLEYL++ SG+VLLVCVAP  KD+ PAG  CV P
Sbjct:  104 MEALKEQLLRDDFDEVRQHPKYQTANVRTEEGSILKWILDVPGGKGTSWEGLVYDLKVTFSRRHPFEPPRVDFPRTHRNVSNPGHPLVDANGCLRMQKLSPDKWLPTIEASQVISWLFHLFETEPPCVTSGNSCPFTHLSSETVLQVHAFLDAGDLGRLSQTSKHMLSLCFDEATWAKLYYRSCTSLDGLLGEKEGGACPVRVMGASGKWFWEGSREAFIRSWEMRKACSSAAFSTAKTQELHVKWELSGLLTVAAGLLYDIQDRRLGDAFPAANAGYLRHMERVLDSLTMRVASLQRLMAWPGVCRGLLSEKDEDRSLPIDAWGRPGQQRRSPSPSPXXHEKHHRCNAGADXXXXXXXXXXXXDSSGREARLTPEQREAMRLLFGNLAALPVARRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATARTPPEGFPYHHHTVAGPCIPYGMGRVELPARVGGEPPQVLAAXXXXXXXXXXXXXXXXXXXXXX---------XXSGCATLQNAQPACGMGGLFWPTLYDLTAAKRRQRERLRECFRKFSRGQRLDVLDPSGVWMGAEVMWAPG-DGGVGTLRVGGWGEDGGAXXXXXXXXXXAPAAEVAGXXXXXXXXXXXXXXXXXPLAGYPVGGNGGMPEWRRVLQLGLMADSGQAAPHPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XWVTTEAPKASQSLXXXXXXXXXXXXXXXXXXXXXXXXXXPVLANWN-PGAGAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVFGQGGT------TPPGSNRKLVRVHYEGHKKKYDEWISVQSGRLAPFRSRTTRPLSVTMQFVEQVVKGASVSSSRGVPAPDCVEIFMSCPWVSHCAGGGVVTYRLPRSTKLCGVLADFCHLADISLRRATVKRARLFLASDFRDGCCDGEELDDHRTLEYLNVTSGSVLLVCVAPTVKDLAPAGSLCVSP 1106
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BLAST of mRNA_C-linearis_contig112.1547.1 vs. uniprot
Match: D7FVT1_ECTSI (Ubiquitin-conjugating enzyme E2W n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVT1_ECTSI)

HSP 1 Score: 707 bits (1825), Expect = 1.260e-236
Identity = 456/828 (55.07%), Postives = 499/828 (60.27%), Query Frame = 3 
Query:   96 MDALKETLLRSDFDRVRQHPKYKGANVQTKDGSIFKWALAVPGGRGTSWEGLVYDLVVTFSRRHPFEPPRVDFPRSHRNVSNPTHPLIDGSGRLRVQRLSPDKWLPTIDASQVVGWLYHLFETEPPSVTSGNRCPFTHLSSETVLQVHTFLDAEDLGRLSQTSKHMLSLCFDEATWAKLYYRSCSSLDGLLGEKEGGACPVRVMGVSGKWFWEGSREAFIRSWEMRNACSRRAFASTKTQELHVRWELGGLMTVAAGLLSDITSRRQNTTPAAGVMAHLGHMEHILDNLTMRIASLQRLMAWPGVCRGLLPENDEDSSLPIGLWDRPAGSGGGXXXXXXXGELNGREARLSPEQREALRMLLGNLASHPATARSRRWRRXXXXXXXXXXXXXXXXXXXXXXXADVTSRVPSEGCPHHHHTIPGPTIPFGMGGVELPTRYGGKSRFVNALGAIATAXXXXXXXXXXXSLAGHGGPIAPGSPHHGGGSTLQNAQPACSMGGLFWPTLYDFTIAKRRQRERLRDSFRKFSRGQKLDVRDPSGVWMGAEVVWAP--------REDSGGGSTATAXXXXXXXXXXXXXXXXXDXXXXXAHGGGQHGVLGGGADPGTPEWRRLLQMGLMVDGGHMGMHANPQAVFAAANAAXXXXXXXXXXXXXXXXXXXXXXXXXXXAAMHPGAGANNGHVANDQGASSVAMSDSGDWVTTGAVDIAQVHLTSAVTAAADSRGLSTWSRKKAGASSSTAPFSSTPPAPGNGMTPNPVEAVPAGNSRKSILVHYEGHKSKYDEWINVQSPRLAPFRSRTTRPLSVTMQSVERVVNGASVS-CSR 2552
            M+ALKE LLRSDFD+VRQHPKY+ ANV+T++GSIFKW L VPGG+GTSWEGLVYDL VTFSRRHPFEPPRVDFPR+HRNVSNP HPL+D +GRLR+Q+LS DKWLPTI+ASQV+GWL+HLFETEPP VTSGN CPFTHLSSETVLQVHTFLDA DLGRLSQTSKHMLSLCFDEATWAKLYYRSC+SLDGLLGEKEGGACPVRVMG SGKWFWEGSREAFIRSWEMR ACS  AF++ KTQELHV+WEL GL+TVAAGLL DI +RR      A    +L HME +LD+LTMR+ASLQRLMAWPGVCRGLL E DED SLPI +W RP                         +QR                                                    R PS     H               VELP R GG+   V A       XXXXXXXXXXX                 G +TLQNAQPAC MGGLFWPTLYD   AKRRQRERLR+ FRKFSRGQKLDVRDPSGVWMGAEV+WAP        R D  G      XXXXXXXXXXXXXXXXX XXXXX            G D G PEWRRLLQ+GLM DGG     + P A+                                  A  +PGAGA            ++A   +G                                     A      F       G G T       P G++RK + VHYEGHK KYDEWI+VQS RLAPFRSRTTRPLSVTMQ VE+VVNGASVS C R
Sbjct:    1 MEALKEKLLRSDFDQVRQHPKYQTANVRTEEGSIFKWILDVPGGKGTSWEGLVYDLEVTFSRRHPFEPPRVDFPRTHRNVSNPGHPLVDANGRLRMQKLSFDKWLPTIEASQVIGWLFHLFETEPPCVTSGNSCPFTHLSSETVLQVHTFLDAGDLGRLSQTSKHMLSLCFDEATWAKLYYRSCTSLDGLLGEKEGGACPVRVMGASGKWFWEGSREAFIRSWEMRKACSSAAFSTAKTQELHVKWELSGLLTVAAGLLHDIQNRRLGDVFPAANAGYLRHMERVLDSLTMRVASLQRLMAWPGVCRGLLSEKDEDGSLPIDVWGRPG------------------------QQR----------------------------------------------------RSPSXXXXXHEK----------QHRVELPARVGGEPPQVLAXXXXXXXXXXXXXXXXXXXXXXX---------XXSGWATLQNAQPACGMGGLFWPTLYDLMAAKRRQRERLRECFRKFSRGQKLDVRDPSGVWMGAEVMWAPGDGGVGTLRADGCGEDGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFAGSPVGGDAGMPEWRRLLQLGLMADGGRALPGSPPPAL----------------------------------ANWNPGAGA------------TLAAVPAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA----LVF-------GQGGT------TPPGSNRKLVRVHYEGHKKKYDEWISVQSGRLAPFRSRTTRPLSVTMQFVEQVVNGASVSRCQR 670
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BLAST of mRNA_C-linearis_contig112.1547.1 vs. uniprot
Match: UPI00174F60B0 (SUMO-conjugating enzyme UBC9-like n=1 Tax=Pipistrellus kuhlii TaxID=59472 RepID=UPI00174F60B0)

HSP 1 Score: 59.7 bits (143), Expect = 1.790e-6
Identity = 37/102 (36.27%), Postives = 53/102 (51.96%), Query Frame = 3 
Query:  144 RQHP-KYKGANVQTKDGSI--FKWALAVPGGRGTSWEGLVYDLVVTFSRRHPFEPPRVDFPRSHRNVSNPTHPLIDGSGRLRVQRLSPDK-WLPTIDASQVV 437
            R HP  +     + +DG++   KW  AVPG RGT+WEG ++ L ++F   +PF PP   F      V    HP +  SG + +  L+ DK W P I   QV+
Sbjct:   18 RDHPFGFVAVPTKNRDGTLNLMKWKCAVPGKRGTAWEGGLFKLRLSFKEDYPFSPPTCQF------VPPLFHPNVYPSGVVCLSILNEDKDWRPGITIKQVL 113
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BLAST of mRNA_C-linearis_contig112.1547.1 vs. uniprot
Match: A0A7I4Z514_HAECO (UBC core domain-containing protein n=1 Tax=Haemonchus contortus TaxID=6289 RepID=A0A7I4Z514_HAECO)

HSP 1 Score: 55.1 bits (131), Expect = 8.860e-5
Identity = 36/138 (26.09%), Postives = 64/138 (46.38%), Query Frame = 3 
Query:  192 SIFKWALAVPGGRGTSWEGLVYDLVVTFSRRHPFEPP--RVDFPRSHRNVSNPTHPLIDGSGRLRVQRLSPDK-WLPTIDASQVVGWLYHLFETEPPSVTSGNRCPFTHLSSETVLQVHTFLDAEDLGRLSQTSKHML 596
            ++FKW  AVPG +GT WEG +Y + + F+  +P  PP  + D P  H NVS         +GR+ +  L  D+ W P I   +V+  ++   +   P+  + +     ++ +    +     DA  + R  +    M+
Sbjct:   37 NLFKWICAVPGKKGTIWEGGLYKIHIYFNDAYPSTPPICKFDPPVYHPNVSY--------TGRICLSILYEDQGWKPAISLKEVLIGIHDFLDDPNPNDPAQDDASLVYVRNRAAYEERVRRDARTIFRPDRVLAQMM 166
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BLAST of mRNA_C-linearis_contig112.1547.1 vs. uniprot
Match: UPI001C54255A (ubiquitin-conjugating enzyme E2 U isoform X4 n=1 Tax=Dipodomys spectabilis TaxID=105255 RepID=UPI001C54255A)

HSP 1 Score: 56.2 bits (134), Expect = 9.590e-5
Identity = 35/109 (32.11%), Postives = 54/109 (49.54%), Query Frame = 3 
Query:  117 LLRSDFDRVRQHPKYKGANVQTKDGSIFKWALAVPGGRGTSWEGLVYDLVVTFSRRHPFEPPRVDFPRSHRNVSNPTHPLID-GSGRLRVQRL-SPDKWLPTIDASQVV 437
            LL  DF  +RQ+  + G +       + KW   + G + + W+GL + LV+TFS  +   PP V F       S P HP +D  +GR  +  L +P +W P+   S V+
Sbjct:    8 LLERDFRELRQN-NFVGISASPVSDDMLKWEAEIEGLQDSMWQGLRFQLVLTFSSEYNHVPPVVKF------ASIPFHPNVDPNTGRPSIDFLDNPARWNPSYTLSSVL 109
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BLAST of mRNA_C-linearis_contig112.1547.1 vs. uniprot
Match: A0A7R9YNM5_DIALT (Hypothetical protein (Fragment) n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YNM5_DIALT)

HSP 1 Score: 54.3 bits (129), Expect = 9.800e-5
Identity = 38/116 (32.76%), Postives = 57/116 (49.14%), Query Frame = 3 
Query:  186 DGS--IFKWALAVPGGRGTSWEGLVYDLVVTFSRRHPFEPPRVDFPRSHRNVSNPT--HPLIDGSGRLRVQRLSPDK-WLPTIDASQVVGWLYHLFETEPPSVTSGNRCPFTHLSS 518
            DGS  I  W  AVPG +GT WEG +Y + + FS  +P +PP+  F        NP   HP +  SG + +  L  +K W P+I   Q++  +  L +  P +     R P+  L +
Sbjct:   37 DGSFNIMLWECAVPGKKGTDWEGGLYRITMEFSDEYPSKPPKCKF--------NPRIFHPNVYPSGTICLSILDENKGWKPSITVKQMLLGIQDLLDN-PNNNDPAQREPYDLLKN 143
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig112.1547.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5J9W3_9PHAE9.550e-31459.48UBC core domain-containing protein n=1 Tax=Ectocar... [more]
D7FVT1_ECTSI1.260e-23655.07Ubiquitin-conjugating enzyme E2W n=1 Tax=Ectocarpu... [more]
UPI00174F60B01.790e-636.27SUMO-conjugating enzyme UBC9-like n=1 Tax=Pipistre... [more]
A0A7I4Z514_HAECO8.860e-526.09UBC core domain-containing protein n=1 Tax=Haemonc... [more]
UPI001C54255A9.590e-532.11ubiquitin-conjugating enzyme E2 U isoform X4 n=1 T... [more]
A0A7R9YNM5_DIALT9.800e-532.76Hypothetical protein (Fragment) n=2 Tax=Diacronema... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig112contigC-linearis_contig112:395618..406127 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score710.7
Seed ortholog evalue1e-201
Seed eggNOG ortholog2880.D7FVT1
Preferred nameUBE2W
KEGG koko:K10688
KEGG Pathwayko04120,map04120
Hectar predicted targeting categoryother localisation
GOsGO:0000209,GO:0003674,GO:0003824,GO:0004842,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0006464,GO:0006508,GO:0006511,GO:0006513,GO:0006515,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0010033,GO:0010498,GO:0016567,GO:0016740,GO:0019538,GO:0019787,GO:0019899,GO:0019941,GO:0030163,GO:0031625,GO:0031974,GO:0031981,GO:0032446,GO:0033554,GO:0035966,GO:0035967,GO:0036211,GO:0042221,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0050896,GO:0051603,GO:0051716,GO:0051788,GO:0061630,GO:0061631,GO:0061650,GO:0061659,GO:0070013,GO:0070647,GO:0070887,GO:0070979,GO:0071218,GO:0071310,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575
EggNOG free text desc.protein modification by small protein conjugation
EggNOG OGsCOG5078@1,KOG0427@2759
EC2.3.2.25
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko04121
Exons10
Model size4260
Cds size3099
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig112.1547.1prot_C-linearis_contig112.1547.1Chordaria linearis ClinC8C monoicouspolypeptideC-linearis_contig112 396684..406032 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927494.5257483-UTR-C-linearis_contig112:395617..3966831622927494.5257483-UTR-C-linearis_contig112:395617..396683Chordaria linearis ClinC8C monoicousUTRC-linearis_contig112 395618..396683 -
1690879731.5256264-UTR-C-linearis_contig112:395617..3966831690879731.5256264-UTR-C-linearis_contig112:395617..396683Chordaria linearis ClinC8C monoicousUTRC-linearis_contig112 395618..396683 -
1622927494.637532-UTR-C-linearis_contig112:406032..4061271622927494.637532-UTR-C-linearis_contig112:406032..406127Chordaria linearis ClinC8C monoicousUTRC-linearis_contig112 406033..406127 -
1690879731.633035-UTR-C-linearis_contig112:406032..4061271690879731.633035-UTR-C-linearis_contig112:406032..406127Chordaria linearis ClinC8C monoicousUTRC-linearis_contig112 406033..406127 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927494.5380201-CDS-C-linearis_contig112:396683..3971831622927494.5380201-CDS-C-linearis_contig112:396683..397183Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 396684..397183 -
1690879731.5365438-CDS-C-linearis_contig112:396683..3971831690879731.5365438-CDS-C-linearis_contig112:396683..397183Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 396684..397183 -
1622927494.5480757-CDS-C-linearis_contig112:397789..3979411622927494.5480757-CDS-C-linearis_contig112:397789..397941Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 397790..397941 -
1690879731.5453851-CDS-C-linearis_contig112:397789..3979411690879731.5453851-CDS-C-linearis_contig112:397789..397941Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 397790..397941 -
1622927494.5578353-CDS-C-linearis_contig112:398441..4000251622927494.5578353-CDS-C-linearis_contig112:398441..400025Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 398442..400025 -
1690879731.5544674-CDS-C-linearis_contig112:398441..4000251690879731.5544674-CDS-C-linearis_contig112:398441..400025Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 398442..400025 -
1622927494.5671775-CDS-C-linearis_contig112:400576..4006481622927494.5671775-CDS-C-linearis_contig112:400576..400648Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 400577..400648 -
1690879731.5672362-CDS-C-linearis_contig112:400576..4006481690879731.5672362-CDS-C-linearis_contig112:400576..400648Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 400577..400648 -
1622927494.5766454-CDS-C-linearis_contig112:400943..4010721622927494.5766454-CDS-C-linearis_contig112:400943..401072Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 400944..401072 -
1690879731.5772235-CDS-C-linearis_contig112:400943..4010721690879731.5772235-CDS-C-linearis_contig112:400943..401072Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 400944..401072 -
1622927494.586294-CDS-C-linearis_contig112:401740..4018831622927494.586294-CDS-C-linearis_contig112:401740..401883Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 401741..401883 -
1690879731.5875394-CDS-C-linearis_contig112:401740..4018831690879731.5875394-CDS-C-linearis_contig112:401740..401883Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 401741..401883 -
1622927494.595412-CDS-C-linearis_contig112:402117..4021981622927494.595412-CDS-C-linearis_contig112:402117..402198Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 402118..402198 -
1690879731.6000333-CDS-C-linearis_contig112:402117..4021981690879731.6000333-CDS-C-linearis_contig112:402117..402198Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 402118..402198 -
1622927494.6042788-CDS-C-linearis_contig112:402917..4030281622927494.6042788-CDS-C-linearis_contig112:402917..403028Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 402918..403028 -
1690879731.608542-CDS-C-linearis_contig112:402917..4030281690879731.608542-CDS-C-linearis_contig112:402917..403028Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 402918..403028 -
1622927494.6168997-CDS-C-linearis_contig112:403879..4041371622927494.6168997-CDS-C-linearis_contig112:403879..404137Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 403880..404137 -
1690879731.6167607-CDS-C-linearis_contig112:403879..4041371690879731.6167607-CDS-C-linearis_contig112:403879..404137Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 403880..404137 -
1622927494.626325-CDS-C-linearis_contig112:405963..4060321622927494.626325-CDS-C-linearis_contig112:405963..406032Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 405964..406032 -
1690879731.6248507-CDS-C-linearis_contig112:405963..4060321690879731.6248507-CDS-C-linearis_contig112:405963..406032Chordaria linearis ClinC8C monoicousCDSC-linearis_contig112 405964..406032 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-linearis_contig112.1547.1

>prot_C-linearis_contig112.1547.1 ID=prot_C-linearis_contig112.1547.1|Name=mRNA_C-linearis_contig112.1547.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=1033bp
MDALKETLLRSDFDRVRQHPKYKGANVQTKDGSIFKWALAVPGGRGTSWE
GLVYDLVVTFSRRHPFEPPRVDFPRSHRNVSNPTHPLIDGSGRLRVQRLS
PDKWLPTIDASQVVGWLYHLFETEPPSVTSGNRCPFTHLSSETVLQVHTF
LDAEDLGRLSQTSKHMLSLCFDEATWAKLYYRSCSSLDGLLGEKEGGACP
VRVMGVSGKWFWEGSREAFIRSWEMRNACSRRAFASTKTQELHVRWELGG
LMTVAAGLLSDITSRRQNTTPAAGVMAHLGHMEHILDNLTMRIASLQRLM
AWPGVCRGLLPENDEDSSLPIGLWDRPAGSGGGSGGNGGGGELNGREARL
SPEQREALRMLLGNLASHPATARSRRWRRRGRAAAAEVAGEGAGAAAGAG
VAADVTSRVPSEGCPHHHHTIPGPTIPFGMGGVELPTRYGGKSRFVNALG
AIATAAAAGAGGGGGGSLAGHGGPIAPGSPHHGGGSTLQNAQPACSMGGL
FWPTLYDFTIAKRRQRERLRDSFRKFSRGQKLDVRDPSGVWMGAEVVWAP
REDSGGGSTATAAAAAAAAGAAGAAGAAGDGGAGAAHGGGQHGVLGGGAD
PGTPEWRRLLQMGLMVDGGHMGMHANPQAVFAAANAAAANADAVAAVAAA
DAAATAAATAANAAAAMHPGAGANNGHVANDQGASSVAMSDSGDWVTTGA
VDIAQVHLTSAVTAAADSRGLSTWSRKKAGASSSTAPFSSTPPAPGNGMT
PNPVEAVPAGNSRKSILVHYEGHKSKYDEWINVQSPRLAPFRSRTTRPLS
VTMQSVERVVNGASVSCSRGVPAPDCVEISMSCPWISHCAGGGVVTYLLP
RSTILGAVLADFCHLAGISLWRSTVQRARLHMAADIRNGSCAVEELDDRR
TLEYLDINSGAVLLVCVAPAAKDILPAGRQCVPPPPRDNDGDGEFFMARR
RWASSGEDGDGGAGDDLGGDIGQLLSSDENGDEDEEEEEEEDTEREVTEE
DSDVADIEAKTSVFGGGGSSGSGGGGRGSGGA*
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mRNA from alignment at C-linearis_contig112:395618..406127-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-linearis_contig112.1547.1 ID=mRNA_C-linearis_contig112.1547.1|Name=mRNA_C-linearis_contig112.1547.1|organism=Chordaria linearis ClinC8C monoicous|type=mRNA|length=10510bp|location=Sequence derived from alignment at C-linearis_contig112:395618..406127- (Chordaria linearis ClinC8C monoicous)
ACCGAGAGTCGCGAGGCCAGGAGAGAGAAGGGGGGGGGTAACCAAGCAAA
GGCTCTTCTCGTCGTGGTGGAGAAGAACCACCTCTGCCCTGTTTCATGGA
CGCTCTCAAGGAAACGCTCCTGAGAAGCGACTTTGATCGCGTTCGACAGC
ACCCCAAGTACAAGGTGGGTGCAAGTTTTAGTTTTTTAGCGGGGGTACAC
CTCGGAGCTTGTACACACAGCAGTCTAACGACAGCAGTAGATTAGGGATG
GGGAGCATGCAGACCGACCCCGGAGTATCTCGCATACCTCGATGGTGTTA
TTTTCTACCCCGTGTAAGGTTGTATCTGTTCGATCCCGAGAGGCAGTAGA
GCGAGCTCGAACTCGATCTCAGTTTGAATAACAGATGCTGCGTGTCGCTC
TTTTCACGGGAACAGGAGACAAGAGACAGACACAAACAGCAGGTCGGTTG
GGTGGTTGGGTCCTTGTATCGCTCGCAGGCACCGCCTGTTCTGAAAGCTG
TTGTTTGGGTGACGCTCCTGCTGCTGTCGTTCATTCTTCTGTCTCTGTGT
CTGTGTGGCGTTCGCTCGGTTTGTGTTTCTCCGCTCCCCACCTCTGGCTG
GCACCGCCGTCAACACCTTCATTATATTTGTCCCCTGCTGAGGTGCTTTG
TAGATATCCCCCCCCGGGGCAGCATTGGTTCAACGATGCAGCGTACTCCA
CAATTCCAATATCCCATCTGCTCATTCGCCAAACTACAATCACACGATAC
GATACGATACGATACGTGACCACGCCATAGCAACAAAGTTGGCATGGCAC
GTACATGCGAGGGCGCTGCGTGTGTGTGTTGTAACTTGACATGGGCCTGG
TTCGTGTGAAAGCATGTGTCTAGTGTCGGTAGAACATGTTGTGAACAGAG
AAAGCGCGCCGCCCCTCCTCCCTATCTCTCTTCTCGACGCTACCAACTGC
ACACAAAGAACACTTCAAAACCCACGGCTGACCAGCCAGACATACATGCG
AGGTAGGCTGTTTCGTTGTATACTTGTACATGTATTTAGGTACACACAAA
GTTCAGCACCGTCATGTACGTTTTTCTTTTTGTTCTTCATCTTCAGATTT
ATTTCCGGTCGCCTCGGTTGTCTAGTTGGTAAACCGCACAGCTTCTAGCG
CCCACAATTAAAACCGTGAGTCTTTCTCTCGAATACGTCGCTGGTTGTGG
AAAACGCTAGTCGTGTGCACACAGAGGGAAGAGATTGCCGCGCTATTCTC
GCATTAAAAATCGAAGGCGAAGCTCCGCAGGAGGGGAGGGTGGGGGACCT
CAGGGAGAGGAACCCTTCTGTGTGACCACGGGCTAAAGTCCCTGTATGTA
TCCGGCAGAAATGCTGTGAGCTCTGGTTATATGTGAAGATAAATAAATAA
AAACATGGTATGTATGTATACAATAAATATTTCCAGAGTTCGCAGGGGCG
CCTTGCCACGCGGGGCATCTTGCCTGAACATCTGAACCGTAGTCACGCAG
AAGGCTCCTCTCTGAGGCCTCCACCCATCTTCTGCGGTGCTTGCCTGGTA
ATGTTTATTTAACGCGAGAGAGTTTCAGCCGTCTCTCCCTCAAGTGTACA
CATGAACTAAGCGCTTTCCACCGACAGGAACCAAAGCGAGAGAAAAACTC
ACTTTTGTGTGAGAAAAAGTAAAGTCGCTTGCGCCGGGATTCGAACCCGT
GAAACCTGCATGCTAGATGGTTTCTGTCTGTGAGACCACTAGACCACCGG
GGCCGTTTACACTTTTATTAAACAAAACGGCATCAAAGAGAGAACCTCCC
CTCAAAGAGTCAAATCTCTAAGCGGTGGATTTACAGTTCGCTTTTACCCC
CCCCCCCCATTTCAAACCCGTGTTGCCAGCTGAAGAACGCCAGAAAGGTG
TTTCGTAAAGCGCGGGTATGATCGATCGATCCCGTGGTCGTAGGCTTCAC
CCATGTATACTATTGAACCCGCCGTCCCGAACCCACGCAGGGTGCCAACG
TGCAGACCAAGGATGGGAGCATCTTCAAGTGGGCACTCGCCGTGCCGGGC
GGCAGGGGCACTAGCTGGGAGGGCCTCGTGTACGACCTGGTGGTGACCTT
CAGCCGCAGGCACCCGTTCGAGCCGCCGAGAGTCGACTTCCCCCGCTCCC
ACCGCAATGTCTCCAACCCGACCCACCCGCTCATCGACGGGAGCGGGCGC
CTGCGCGTACAGAGGCTCAGCCCCGACAAGTGGCTGCCCACGATAGATGT
AAGCGTGGTGTTTTAAGGAGGCTCAGCCCCGACAAGTGGCTGCCCACGAT
AGATGTAAGCGTGTGTTTTTAGGAGGCTCAAAGAGTGGCTGCCCACCACG
ATAGATGTAAGCGTGGTGTTTTAAGGAGGCTCAAAGAGTGGCTGCCCACC
ACGATAGATGTAAGCGTGGTGTTTTTAGGAGGCTCAAAGAGTGGCTGCCC
ACGACGATAGATGTAAGCGTGGTGTTTTAAGGAGGCTCAAAGATTGGCTG
CCCACCACGATAGATGTAAGCGTGTGTTTTCAGAAGGCTCAAAGTCGGCC
CTGGCGAAGCGGTTTGGGCATGATGGATGGAAGCGCGTGTATTTAGTTAG
AGGCTCAAGGCCAGTCCTGGAGAATTGGCTGCACACAATGGAAGCAAGCG
TGTATTTTGGGAGGCTCGGCCCTTGAGAAATGGTTGTGCCCGACACACGG
ATGTGAGCATGCAGAGGTTAGGCCATGACGTGTTGCTCACGATAGAAAAA
GAGGTAAGCGGGAACTTAGACCTGGTGTATTTCTTCCCCCCTCGAGAGAG
TAGGGGGGAGGGGGTGTTGGTAAATGGGGCGTGCTCGGAAACCCAACCCC
CTATTTTGTCCCCCTGCTACTCCTTGGGGGAGGCACGAGGCGTAGAGACC
GAGCATCTCCACCACTGGTTGGTTCAACTTGTCGAAATTTTTTTGTTAGA
TGCTGCTGCTGCTGCTGCTGCTGCGAGTGGGTACTGTATTTTCTCTTGGC
ATTTCTTCAAGCTTGTCTACTCGCCTATTTACTTTGTAGTACCATCGTCT
CCCCTCGTTTTTTCCCTTCGCCACTTCTTCGTAACCTACGGTGATGCAGG
CGAGCCAGGTGGTTGGCTGGCTGTACCACTTGTTCGAGACGGAGCCCCCG
AGCGTTACGAGCGGCAACCGGTGCCCGTTCACCCACCTCTCTTCCGAAAC
GGTTCTCCAGGTGTGTGTGTATGTGTCTTGTCTGCCTTGTCTGTTATTTT
TAGCATCGCCCGCGCTAACCGGTTAACCAATGAAAGTACGCCAGCCTTCG
GGTAGGAACGTGAACGCTTTTCTAAGCGTTGGGACCCCTTCGATATTGGT
TCTGCAAAATAAGTCCACTACAGGGCACCGGATCAGGGCACCGGATCAAG
AGGAAACATGTACATACGTGTGTGCGTGTTTGTGTGTCTGTTTTGGTGGA
GTAGACCAGCATCGACCGCGTTAAATTTACAACACAATTCTATTAACCTG
GTCGACCAATACCAAGACGCCAGGTAGGTCAGCCCCGGCCGGGGGAAACG
CGAAAAGCGTTGTCCACTTGTGTCGGACCCCCCTTGATGAGGGCTGTTGC
TCATAAATAGCTCGACTAAAGGGCTAAGATTCCGCGTTAAGCGAAGGCAT
GGTGTGCGTGCGTACGCGCGTGCACGCGTGTGGCCAAGGCTGAATCGGTG
CAAACAAGCACCGATCGTGTCCTTGAACGCACAATTTTCCTCTTACAGAC
AGTACAGCATTCCTTTCCAGGGGTGGTTTTGTGCCGGTGCTTCATCGTCA
TCGTCAGATGAAAGATAAAAGAGTTACAGGCGCAGCGTTGTTCGAAGCGT
ACGGCAGTACAAAACTCTTATCCCTGACGACCAACCCGACTGCCCCGCTG
TTGCCTGTGCTCTTCTGGAACAACCAAAGGTGCACACGTTTTTGGACGCC
GAGGACCTGGGGCGCCTCTCGCAGACCAGCAAGCACATGCTCTCCCTCTG
CTTTGACGAGGTGGGTCTGGCGTCAATCGTTGATGCATGTGCCCGCCCGC
TCGCTGTGCCTGTTTATTAACGTCTGTCTGTGTGTCTGTGGGCCTATCTG
CCTGCCTGCCCATCTGTCTCCCCCGCTGCTTTTGACACCGTGAGGTTGAC
TACTAAGGCTGTAACCGACAACAACACCCAACCGCATGCCACATTCACGA
CACTTGTTTAACAACTGTTGACGGGAAATTTGTGAACGAACCAGGCGACG
TGGGCGAAGCTGTACTACCGCTCGTGCTCGTCGTTGGACGGCCTTCTGGG
GGAGAAGGAGGGTGGCGCCTGTCCCGTGCGCGTGATGGGCGTGTCCGGAA
AGTGGTTCTGGGAAGGCTCCAGGGAGGCGTTCATCCGGTAAGCCAAAATG
TTGATGATTGTTTGGGGTTGTTTTGTCCTCGTTCGTTTTCTCGCGGTTTT
GATCGGTGGCTTATTTCCCCTTACCTCTATAGGAGGAGCTGTTTTCTGGC
GCCAAATACCCCCTTTTTCTGGACTGGTGTAGGCACCCGTACGCATGTCT
GCTGCTCCTGCAGAGCCCCCAGAGCAAACACCCTGGATCGTGCTGTAGCT
AGCGCAGGCCGTGCGAAGCTTCTCGCCGCGGAAATGACGGTCGATGCAAA
ACACTGATGTGGTTCAGCGGCCGTGCGTTTGGCACCGAGACAGCGAATCT
CGACGAAAAGGAAGAATGGATGCTTGCGGGCTATGGTTGCAAAGCGCCCC
GTTGTTGGGATTTTGACTCTCTGCTGGTGTGCTCTTGTTTCGAGCGTTCT
GTGCGCCGTGTCGGCAACCGCCTCAAAAAAGTGAGCTGTGGTTGTTTGCT
CCTGTGTGCCATGAAGCCGAAAGAGGACGAACGACCCGTAACCCACGGTG
TCCGAGGGCTCATCGCGAACAGCAGTTGTCGCAGCTCTGCTTCAGATCCA
AAGATCCAAAAGATTCTCACCGAATGAAGCGTCCCTTTGTTTTCGCTGGC
TGGTCTCTTCCTTTGGATGTGTGCTTTTGCTCTTTGCTTTTTGCTTGCCG
CGCAGGTCGTGGGAGATGAGAAACGCATGCAGCCGTCGCGCGTTCGCCTC
GACCAAGACGCAAGAGCTGCACGTCCGCTGGGAGCTCGGTGGCCTCATGA
CGGTGGCGGCAGGGCTGCTCTCTGACATCACCAGGTGCGTTGCTTGCCTG
CTTGCCTGCTTGCCTGCTTGCCTGCTTGCCTGCTTGCCTGCTTGCCTGTT
TTCCTGCTTTCCTGCTTTCCTGCCGTTGTCCGTCCGTGTGGGCGTATTGC
GAGCCTAGCCTGTGATGTTGTACAGGAGCGGCGGCAGATCTCTCTCTCTC
TCTCTCTCTCTCTCACACACACACACACACTCTCTCTCTCGCGGTAGCGG
TAGTGCTGTCCTGCTATCGCTTTGACTTAACTGGCTGCGCTTCGCTTCGT
GTCCGGTGTTGTATTGACTGAATGAACAGCCGGCGGCAGAACACCACACC
CGCAGCAGGAGTCATGGCGCATTTGGGTCACATGGAGCACATTCTCGACA
AGTGAGAGTAGTGGTAGTGGTAGGGATTGGCCCCACTGCTGTGCCCCCTC
CCTCCAAAGGGGTGCGAGGTGGGCCAAAGATGGCAAGAACAAGAAACAAT
GATTTTCGGTTTTTGTTGACTCTCCTCCCACTGCTGCATGATGTGGTACC
ACCGCTAGCTGTCGTCGTTGTGAAGTCTTGCAACTATCGATAACGGAAAA
AGAAAACAGAAAGAAAACGCGCATTCTCCGACTCCGAGTGGCTGCCGTGC
AACGCAGGTTGCGTTTTTGATGCTGCTGCTGCCTCGGCACACACAGCGAG
CGCATGTCGTGCTGTTCCCGCCGCTTTGTCTTGGTTGCTGCATCAAACCA
CCAGAACCACATCGTATGAAGTAAAATAACAAGTTAAAAACAGCACGACA
CACACACATGCTGCCTTAGTTTTGCCTATACTCTCAACCCCCCATCACAA
AGCCGCACGCCTTCATTACCAGTCGCCATCCTTTCCTCAAAATCAACACC
CTCATGCATCACATCCCACCCCCCACCACCCCCGCTCCCTGGCCCCGAAT
AGCCTTACCATGAGGATCGCGAGCCTGCAGCGGCTGATGGCGTGGCCGGG
CGTCTGCCGCGGCCTCCTCCCCGAGAACGACGAAGACAGCTCGTTGCCGA
TCGGCCTTTGGGACCGTCCCGCCGGCAGCGGCGGCGGCAGCGGCGGCAAC
GGCGGCGGCGGGGAGCTGAACGGGAGGGAGGCGAGGCTGTCCCCCGAGCA
GCGGGAAGCCCTGCGCATGCTCTTGGGAAACCTCGCGTCTCACCCCGCCA
CGGCGAGGTCCCGGCGGTGGCGGCGCCGCGGACGGGCGGCGGCGGCGGAG
GTGGCGGGAGAGGGGGCGGGGGCGGCAGCGGGAGCCGGCGTTGCTGCTGA
CGTGACCAGTCGGGTGCCCTCGGAGGGATGTCCGCACCACCACCACACGA
TCCCGGGGCCCACGATACCGTTCGGCATGGGTGGCGTGGAACTGCCGACG
CGATACGGCGGAAAGTCGAGGTTCGTGAACGCCCTGGGTGCTATCGCCAC
CGCCGCCGCCGCAGGAGCTGGGGGAGGAGGGGGCGGCAGCTTGGCGGGCC
ACGGGGGGCCGATCGCCCCGGGTTCTCCTCACCATGGAGGCGGGTCGACC
CTCCAGAACGCGCAGCCGGCTTGCAGCATGGGAGGGCTCTTCTGGCCAAC
TCTCTACGACTTCACTATCGCGAAGAGGCGGCAGCGCGAGCGGCTGCGCG
ACTCCTTCCGCAAGTTCTCTCGCGGACAGAAGCTGGACGTGCGAGACCCC
TCCGGGGTGTGGATGGGCGCCGAGGTTGTGTGGGCTCCTAGAGAGGACAG
CGGTGGCGGGTCTACTGCTACTGCAGCTGCTGCGGCCGCCGCCGCTGGTG
CTGCTGGTGCTGCTGGTGCTGCTGGCGACGGTGGGGCCGGGGCCGCCCAC
GGCGGCGGCCAGCATGGAGTCTTGGGGGGAGGGGCTGACCCCGGGACTCC
CGAGTGGCGCCGACTGCTGCAGATGGGGCTCATGGTCGACGGTGGGCACA
TGGGAATGCATGCGAATCCCCAGGCTGTGTTTGCTGCTGCTAACGCCGCC
GCCGCTAACGCTGACGCCGTTGCCGCCGTTGCCGCCGCCGACGCCGCCGC
CACCGCCGCCGCCACCGCCGCCAACGCTGCCGCAGCAATGCACCCCGGGG
CCGGAGCGAACAACGGCCACGTAGCCAACGATCAAGGGGCATCGTCCGTG
GCCATGAGCGACAGCGGCGACTGGGTCACCACTGGAGCGGTCGACATCGC
GCAGGTCCACCTTACCTCGGCCGTCACCGCCGCCGCCGACTCCCGCGGCT
TGTCCACGTGGTCCCGCAAGAAGGCCGGAGCGTCTTCCTCGACGGCTCCG
TTTTCTTCCACACCCCCGGCGCCGGGGAACGGGATGACACCGAACCCGGT
CGAGGCGGTGCCCGCCGGGAACTCGAGGAAGTCGATCCTGGTCCACTACG
AGGGGCACAAGAGCAAATACGACGAGTGGATCAACGTGCAGTCGCCGAGG
CTGGCGCCGTTCCGGTCGCGCACGACCCGGCCGCTTAGCGTGACGATGCA
GTCGGTGGAGAGGGTGGTCAATGGCGCGTCAGTCAGGTGCGCTTTTTCGG
CGTGGCGCGGCCGGCGTGTGGGTTTTGGTTTAGCTGTTTACAAGGCGTGT
TGAGAATGGCGTTCATGCGTGCGCGCTGCTTGAGTCGGATTTTGTTCGTC
TTGCGGCCTTCGTGTGTGGTGTAGGCCGTAGTCGTCGTTCTGGTACATGC
CGGTATGTATGTAATCAAGGGACCCTTTTGTCCTGGAACGCCCACCACGT
CTGCGGCCGTAATTCCGTGGTGCCTCGTTTGTGTGAGTTGCCCTGTAAGC
ACGAAGTCGCCTGTCTCTCGCTTATTTAGGGCAACAATGTAAGCACGCAC
TTAATGAGGTTCTGGGTTTGTGGTCTGAGGACAATGCAGAAGCTCCAACT
CCAAATCACGCCGGAGTTTTCGACATAGGCTTGCACGTACAAAACGCTGG
CGTAAGTGCGCCCTTCCTTCCTCACCTCCTTTGGTTTTTCCTGCCTTTGA
CCCTTAACCGTGTCCTTGATCCGATGTACCGCACAGCTGTTCAAGGGGGG
TCCCTGCGCCTGACTGCGTTGAGATCTCCATGTCCTGCCCCTGGATCTCA
CACTGCGCGGGTGGCGGCGTGGTGACCTACCTCCTCCCAAGGTCGACCAT
CCTCGGCGCCGTCCTGGCCGACTTCTGCCACTTGGCAGGTCCGTTACATG
TGACGAGGGCGGGCGGGTCTACAGTAGGTAGAGTTGTAATGGCTGGGACT
GATCGCATCAATTGAGTGCGTATCTGGTCGGGCAACCACGATCCAGTCAC
ACCGCCAGAAACCCATCATGGTTTCTGGATGTTGCCGTGCAGCGAATCAG
ACAAGGTTGTGCAGCGAAGCGTTTTCAGCCTACGTGCGAGTGGTACGGCC
GCAAGGTGCCGAAGGTCCGCCTCACTTGCGGTTGGTTCCTGGTGTCGTAT
CGTGTCGCTCACCCATCGCCGCTCGTAGATTGGCGCTCTGGGAGAGGCCT
ATTTGTAGCGTTGTTGGAGAGGCGCCGAGAGTGGCGTCGTTCAAATCTTG
TAGGAGTGGGAACGTTCTCTAGCTGGAATCATCGGAACAGCAGCTGCTCT
ACGTGATCAGAGCATCTTTGTACCATGTTTAGTTTGAATCTTGTGGTTAC
ATGTAAGAAGAGACCAAAACAGTGCCTCTTCTGTAGCGGGAGGAGGGACG
AAGACGTACAACAGGCAAGCAAACTTACAGAACCCCCCCCCCCCGCGCGC
TTCCCACCCTGTTGCGTACCTGTGTTTCTCACACCATGACCCAGGCATAA
GCCTCTGGCGCTCTACCGTTCAGCGCGCGCGGCTCCACATGGCGGCCGAC
ATCCGCAATGGCTCCTGCGCCGTCGAGGAACTCGACGACCGCCGCACGCT
CGAGTACCTCGACATCAACTCCGGCGCCGTTCTCCTCGTGTGCGTGGCGC
CGGCGGCTAAGGACATCCTCCCTGCCGGTCGACAGTGCGTGCCCCCGCCC
CCCCGTGACAACGACGGGGATGGCGAGTTTTTCATGGCCCGGAGGCGGTG
GGCCAGCTCGGGTGAGGATGGCGATGGCGGCGCCGGCGATGATCTCGGTG
GTGATATCGGACAGCTACTATCTTCGGATGAAAATGGAGATGAAGATGAG
GAGGAGGAGGAGGAGGAGGACACTGAGCGGGAGGTGACGGAGGAGGATAG
TGATGTTGCTGACATTGAAGCTAAAACTTCTGTTTTTGGTGGTGGTGGTA
GTAGTGGTAGTGGTGGCGGCGGTCGTGGTAGTGGGGGAGCGTGAGGCGGC
GGTGGGGCGAGATGAATACAGGAGGGGGGCTGGCGCCGTAGGCCACCTCG
ACTCCCTGTGACGTTGAGCAAGAGTCACACCGCTGCCTGCCGTCGGCTTT
TGGTTTTCGACGTTCGGCGTTGTGCGGACGTCTCAGCGAGCAGCTCATCC
GATTGCTCCGCTACATAGGCCATTGATTAAGATGCTGCCGGGTCTGATGC
TGGTTTGCTCGCAGATGAGGGGTTGCGGCGCTCTGTTCATGTGTAGCCTG
GTTACCTTTGATGTACGTGTAAAGTTGGGCGGGCCTACCTGGGAAAATCT
GAGGCAGACAGCTTTCTTGTTCCCCGTTTGTCCGTTCGTGGTATTTCCCT
TTCTTTCGTGCGTTGACGTTTTTAGTGTTTTCTGTGCTCGGTTGGTTGTA
TTTTGGGCGGTTTTTCTCTCTACAATTGGTGCGTGGTGCCATTGTACGCT
GCCCCGGCGCGAGTTTTGTGGTTCACGAGTTTATTACGTTAAAATTGTTG
ACGCAGCAGGCCACACGGCGGTTGTGTTGTGTTTTTGTTTTTATTTACAG
AACGGTTGCGCTAAAACGAGTGTAGGGCGTCTCTAGTCCAGCAAGTCGCG
TTTGAAAGACATGTGGCTGATTCCATTGCATACTGTAGGAGTATAATTTA
GGTAAATCGAATGGAAGATGCAACAGAAAACTAACCCCTGATTCCATTTT
GTGAACACAGTTTTAAGTTTGGAATGGCTTTGTTAGTTGGGCTCACTAGG
TCTGTCGATCTGCGGACTTTTTTACACCGAACTTTGCCAAACCAAACTTA
GCTGCGTTTATCTTGCCTGTACCTGTAAGCTTTGCTGACAGTGGGGTGGC
GAAGAAAGTAAACGGCGGTATCATCGACGTCGGCGTATGAAACGTGGCCT
GTAGATCTCTGGCAATACAATAGGTGCTGGCGTGGGTAAGGTTTAGACGC
GAGCGACATCATTTTTGCTTCTGAAAAGCTTCCTTCGACCTCGGCTGTTC
AATGAGAGAGGACAGGAAAAAGCGAGGGGGTTCGTGCGCGGATTACATAA
CTGTCTTTCC
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Coding sequence (CDS) from alignment at C-linearis_contig112:395618..406127-

>mRNA_C-linearis_contig112.1547.1 ID=mRNA_C-linearis_contig112.1547.1|Name=mRNA_C-linearis_contig112.1547.1|organism=Chordaria linearis ClinC8C monoicous|type=CDS|length=6198bp|location=Sequence derived from alignment at C-linearis_contig112:395618..406127- (Chordaria linearis ClinC8C monoicous)
ATGGACGCTCTCAAGGAAACGCTCCTGAGAAGCGACTTTGATCGCGTTCG
ACAGCACCCCAAGTACAAGATGGACGCTCTCAAGGAAACGCTCCTGAGAA
GCGACTTTGATCGCGTTCGACAGCACCCCAAGTACAAGGGTGCCAACGTG
CAGACCAAGGATGGGAGCATCTTCAAGTGGGCACTCGCCGTGCCGGGCGG
CAGGGGCACTAGCTGGGAGGGCCTCGTGTACGACCTGGTGGTGACCTTCA
GCCGCAGGCACCCGTTCGAGCCGCCGAGAGTCGACTTCCCCCGCTCCCAC
CGCAATGTCTCCAACCCGACCCACCCGCTCATCGACGGGAGCGGGCGCCT
GCGCGTACAGAGGCTCAGCCCCGACAAGTGGCTGCCCACGATAGATGGTG
CCAACGTGCAGACCAAGGATGGGAGCATCTTCAAGTGGGCACTCGCCGTG
CCGGGCGGCAGGGGCACTAGCTGGGAGGGCCTCGTGTACGACCTGGTGGT
GACCTTCAGCCGCAGGCACCCGTTCGAGCCGCCGAGAGTCGACTTCCCCC
GCTCCCACCGCAATGTCTCCAACCCGACCCACCCGCTCATCGACGGGAGC
GGGCGCCTGCGCGTACAGAGGCTCAGCCCCGACAAGTGGCTGCCCACGAT
AGATGCGAGCCAGGTGGTTGGCTGGCTGTACCACTTGTTCGAGACGGAGC
CCCCGAGCGTTACGAGCGGCAACCGGTGCCCGTTCACCCACCTCTCTTCC
GAAACGGTTCTCCAGGCGAGCCAGGTGGTTGGCTGGCTGTACCACTTGTT
CGAGACGGAGCCCCCGAGCGTTACGAGCGGCAACCGGTGCCCGTTCACCC
ACCTCTCTTCCGAAACGGTTCTCCAGGTGCACACGTTTTTGGACGCCGAG
GACCTGGGGCGCCTCTCGCAGACCAGCAAGCACATGCTCTCCCTCTGCTT
TGACGAGGTGCACACGTTTTTGGACGCCGAGGACCTGGGGCGCCTCTCGC
AGACCAGCAAGCACATGCTCTCCCTCTGCTTTGACGAGGCGACGTGGGCG
AAGCTGTACTACCGCTCGTGCTCGTCGTTGGACGGCCTTCTGGGGGAGAA
GGAGGGTGGCGCCTGTCCCGTGCGCGTGATGGGCGTGTCCGGAAAGTGGT
TCTGGGAAGGCTCCAGGGAGGCGTTCATCCGGCGACGTGGGCGAAGCTGT
ACTACCGCTCGTGCTCGTCGTTGGACGGCCTTCTGGGGGAGAAGGAGGGT
GGCGCCTGTCCCGTGCGCGTGATGGGCGTGTCCGGAAAGTGGTTCTGGGA
AGGCTCCAGGGAGGCGTTCATCCGGTCGTGGGAGATGAGAAACGCATGCA
GCCGTCGCGCGTTCGCCTCGACCAAGACGCAAGAGCTGCACGTCCGCTGG
GAGCTCGGTGGCCTCATGACGGTGGCGGCAGGGCTGCTCTCTGACATCAC
CAGGTCGTGGGAGATGAGAAACGCATGCAGCCGTCGCGCGTTCGCCTCGA
CCAAGACGCAAGAGCTGCACGTCCGCTGGGAGCTCGGTGGCCTCATGACG
GTGGCGGCAGGGCTGCTCTCTGACATCACCAGCCGGCGGCAGAACACCAC
ACCCGCAGCAGGAGTCATGGCGCATTTGGGTCACATGGAGCACATTCTCG
ACAACCGGCGGCAGAACACCACACCCGCAGCAGGAGTCATGGCGCATTTG
GGTCACATGGAGCACATTCTCGACAACCTTACCATGAGGATCGCGAGCCT
GCAGCGGCTGATGGCGTGGCCGGGCGTCTGCCGCGGCCTCCTCCCCGAGA
ACGACGAAGACAGCTCGTTGCCGATCGGCCTTTGGGACCGTCCCGCCGGC
AGCGGCGGCGGCAGCGGCGGCAACGGCGGCGGCGGGGAGCTGAACGGGAG
GGAGGCGAGGCTGTCCCCCGAGCAGCGGGAAGCCCTGCGCATGCTCTTGG
GAAACCTCGCGTCTCACCCCGCCACGGCGAGGTCCCGGCGGTGGCGGCGC
CGCGGACGGGCGGCGGCGGCGGAGGTGGCGGGAGAGGGGGCGGGGGCGGC
AGCGGGAGCCGGCGTTGCTGCTGACGTGACCAGTCGGGTGCCCTCGGAGG
GATGTCCGCACCACCACCACACGATCCCGGGGCCCACGATACCGTTCGGC
ATGGGTGGCGTGGAACTGCCGACGCGATACGGCGGAAAGTCGAGGTTCGT
GAACGCCCTGGGTGCTATCGCCACCGCCGCCGCCGCAGGAGCTGGGGGAG
GAGGGGGCGGCAGCTTGGCGGGCCACGGGGGGCCGATCGCCCCGGGTTCT
CCTCACCATGGAGGCGGGTCGACCCTCCAGAACGCGCAGCCGGCTTGCAG
CATGGGAGGGCTCTTCTGGCCAACTCTCTACGACTTCACTATCGCGAAGA
GGCGGCAGCGCGAGCGGCTGCGCGACTCCTTCCGCAAGTTCTCTCGCGGA
CAGAAGCTGGACGTGCGAGACCCCTCCGGGGTGTGGATGGGCGCCGAGGT
TGTGTGGGCTCCTAGAGAGGACAGCGGTGGCGGGTCTACTGCTACTGCAG
CTGCTGCGGCCGCCGCCGCTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGC
GACGGTGGGGCCGGGGCCGCCCACGGCGGCGGCCAGCATGGAGTCTTGGG
GGGAGGGGCTGACCCCGGGACTCCCGAGTGGCGCCGACTGCTGCAGATGG
GGCTCATGGTCGACGGTGGGCACATGGGAATGCATGCGAATCCCCAGGCT
GTGTTTGCTGCTGCTAACGCCGCCGCCGCTAACGCTGACGCCGTTGCCGC
CGTTGCCGCCGCCGACGCCGCCGCCACCGCCGCCGCCACCGCCGCCAACG
CTGCCGCAGCAATGCACCCCGGGGCCGGAGCGAACAACGGCCACGTAGCC
AACGATCAAGGGGCATCGTCCGTGGCCATGAGCGACAGCGGCGACTGGGT
CACCACTGGAGCGGTCGACATCGCGCAGGTCCACCTTACCTCGGCCGTCA
CCGCCGCCGCCGACTCCCGCGGCTTGTCCACGTGGTCCCGCAAGAAGGCC
GGAGCGTCTTCCTCGACGGCTCCGTTTTCTTCCACACCCCCGGCGCCGGG
GAACGGGATGACACCGAACCCGGTCGAGGCGGTGCCCGCCGGGAACTCGA
GGAAGTCGATCCTGGTCCACTACGAGGGGCACAAGAGCAAATACGACGAG
TGGATCAACGTGCAGTCGCCGAGGCTGGCGCCGTTCCGGTCGCGCACGAC
CCGGCCGCTTAGCGTGACGATGCAGTCGGTGGAGAGGGTGGTCAATGGCG
CGTCAGTCAGCCTTACCATGAGGATCGCGAGCCTGCAGCGGCTGATGGCG
TGGCCGGGCGTCTGCCGCGGCCTCCTCCCCGAGAACGACGAAGACAGCTC
GTTGCCGATCGGCCTTTGGGACCGTCCCGCCGGCAGCGGCGGCGGCAGCG
GCGGCAACGGCGGCGGCGGGGAGCTGAACGGGAGGGAGGCGAGGCTGTCC
CCCGAGCAGCGGGAAGCCCTGCGCATGCTCTTGGGAAACCTCGCGTCTCA
CCCCGCCACGGCGAGGTCCCGGCGGTGGCGGCGCCGCGGACGGGCGGCGG
CGGCGGAGGTGGCGGGAGAGGGGGCGGGGGCGGCAGCGGGAGCCGGCGTT
GCTGCTGACGTGACCAGTCGGGTGCCCTCGGAGGGATGTCCGCACCACCA
CCACACGATCCCGGGGCCCACGATACCGTTCGGCATGGGTGGCGTGGAAC
TGCCGACGCGATACGGCGGAAAGTCGAGGTTCGTGAACGCCCTGGGTGCT
ATCGCCACCGCCGCCGCCGCAGGAGCTGGGGGAGGAGGGGGCGGCAGCTT
GGCGGGCCACGGGGGGCCGATCGCCCCGGGTTCTCCTCACCATGGAGGCG
GGTCGACCCTCCAGAACGCGCAGCCGGCTTGCAGCATGGGAGGGCTCTTC
TGGCCAACTCTCTACGACTTCACTATCGCGAAGAGGCGGCAGCGCGAGCG
GCTGCGCGACTCCTTCCGCAAGTTCTCTCGCGGACAGAAGCTGGACGTGC
GAGACCCCTCCGGGGTGTGGATGGGCGCCGAGGTTGTGTGGGCTCCTAGA
GAGGACAGCGGTGGCGGGTCTACTGCTACTGCAGCTGCTGCGGCCGCCGC
CGCTGGTGCTGCTGGTGCTGCTGGTGCTGCTGGCGACGGTGGGGCCGGGG
CCGCCCACGGCGGCGGCCAGCATGGAGTCTTGGGGGGAGGGGCTGACCCC
GGGACTCCCGAGTGGCGCCGACTGCTGCAGATGGGGCTCATGGTCGACGG
TGGGCACATGGGAATGCATGCGAATCCCCAGGCTGTGTTTGCTGCTGCTA
ACGCCGCCGCCGCTAACGCTGACGCCGTTGCCGCCGTTGCCGCCGCCGAC
GCCGCCGCCACCGCCGCCGCCACCGCCGCCAACGCTGCCGCAGCAATGCA
CCCCGGGGCCGGAGCGAACAACGGCCACGTAGCCAACGATCAAGGGGCAT
CGTCCGTGGCCATGAGCGACAGCGGCGACTGGGTCACCACTGGAGCGGTC
GACATCGCGCAGGTCCACCTTACCTCGGCCGTCACCGCCGCCGCCGACTC
CCGCGGCTTGTCCACGTGGTCCCGCAAGAAGGCCGGAGCGTCTTCCTCGA
CGGCTCCGTTTTCTTCCACACCCCCGGCGCCGGGGAACGGGATGACACCG
AACCCGGTCGAGGCGGTGCCCGCCGGGAACTCGAGGAAGTCGATCCTGGT
CCACTACGAGGGGCACAAGAGCAAATACGACGAGTGGATCAACGTGCAGT
CGCCGAGGCTGGCGCCGTTCCGGTCGCGCACGACCCGGCCGCTTAGCGTG
ACGATGCAGTCGGTGGAGAGGGTGGTCAATGGCGCGTCAGTCAGCTGTTC
AAGGGGGGTCCCTGCGCCTGACTGCGTTGAGATCTCCATGTCCTGCCCCT
GGATCTCACACTGCGCGGGTGGCGGCGTGGTGACCTACCTCCTCCCAAGG
TCGACCATCCTCGGCGCCGTCCTGGCCGACTTCTGCCACTTGGCAGCTGT
TCAAGGGGGGTCCCTGCGCCTGACTGCGTTGAGATCTCCATGTCCTGCCC
CTGGATCTCACACTGCGCGGGTGGCGGCGTGGTGACCTACCTCCTCCCAA
GGTCGACCATCCTCGGCGCCGTCCTGGCCGACTTCTGCCACTTGGCAGGC
ATAAGCCTCTGGCGCTCTACCGTTCAGCGCGCGCGGCTCCACATGGCGGC
CGACATCCGCAATGGCTCCTGCGCCGTCGAGGAACTCGACGACCGCCGCA
CGCTCGAGTACCTCGACATCAACTCCGGCGCCGTTCTCCTCGTGTGCGTG
GCGCCGGCGGCTAAGGACATCCTCCCTGCCGGTCGACAGTGCGTGCCCCC
GCCCCCCCGTGACAACGACGGGGATGGCGAGTTTTTCATGGCCCGGAGGC
GGTGGGCCAGCTCGGGTGAGGATGGCGATGGCGGCGCCGGCGATGATCTC
GGTGGTGATATCGGACAGCTACTATCTTCGGATGAAAATGGAGATGAAGA
TGAGGAGGAGGAGGAGGAGGAGGACACTGAGCGGGAGGTGACGGAGGAGG
ATAGTGATGTTGCTGACATTGAAGCTAAAACTTCTGTTTTTGGTGGTGGT
GGTAGTAGTGGTAGTGGTGGCGGCGGTCGTGGTAGTGGGGGAGCGTGAGC
ATAAGCCTCTGGCGCTCTACCGTTCAGCGCGCGCGGCTCCACATGGCGGC
CGACATCCGCAATGGCTCCTGCGCCGTCGAGGAACTCGACGACCGCCGCA
CGCTCGAGTACCTCGACATCAACTCCGGCGCCGTTCTCCTCGTGTGCGTG
GCGCCGGCGGCTAAGGACATCCTCCCTGCCGGTCGACAGTGCGTGCCCCC
GCCCCCCCGTGACAACGACGGGGATGGCGAGTTTTTCATGGCCCGGAGGC
GGTGGGCCAGCTCGGGTGAGGATGGCGATGGCGGCGCCGGCGATGATCTC
GGTGGTGATATCGGACAGCTACTATCTTCGGATGAAAATGGAGATGAAGA
TGAGGAGGAGGAGGAGGAGGAGGACACTGAGCGGGAGGTGACGGAGGAGG
ATAGTGATGTTGCTGACATTGAAGCTAAAACTTCTGTTTTTGGTGGTGGT
GGTAGTAGTGGTAGTGGTGGCGGCGGTCGTGGTAGTGGGGGAGCGTGA
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