prot_C-linearis_contig112.1540.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig112.1540.1
Unique Nameprot_C-linearis_contig112.1540.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length127
Homology
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BLAST of mRNA_C-linearis_contig112.1540.1 vs. uniprot
Match: D7FVS5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVS5_ECTSI)

HSP 1 Score: 215 bits (547), Expect = 4.000e-70
Identity = 109/127 (85.83%), Postives = 121/127 (95.28%), Query Frame = 0 
Query:    1 MTLDDKGRRLHGRVEFFDRNVTQLTKHVQQIIGHHQADGVKHGINFSAKIKTIAAQEPFADLQDRLVGLAELTERISLERKNIMIDRAKSQVLNKLAEIKKTVISPTQALLQDRESCVKALLKAQEK 127
            MTLD+KGRRLHGR+EFFDRNV QL +H+ Q +GHHQ DGVKHGI+FS KIKTIAAQEPFADLQDRLVGLAE+TERISLERKNIMIDRAKSQVLNKLA+IKKTVI+PTQALLQDR+SCVKAL+KA+EK
Sbjct:    1 MTLDEKGRRLHGRLEFFDRNVAQLIRHISQTVGHHQ-DGVKHGISFSTKIKTIAAQEPFADLQDRLVGLAEITERISLERKNIMIDRAKSQVLNKLADIKKTVIAPTQALLQDRDSCVKALVKAEEK 126
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BLAST of mRNA_C-linearis_contig112.1540.1 vs. uniprot
Match: A0A836CPR2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPR2_9STRA)

HSP 1 Score: 147 bits (372), Expect = 8.000e-42
Identity = 71/125 (56.80%), Postives = 101/125 (80.80%), Query Frame = 0 
Query:    1 MTLDDKGRRLHGRVEFFDRNVTQLTKHVQQIIGHHQADGVKHGINFSAKIKTIAAQEPFADLQDRLVGLAELTERISLERKNIMIDRAKSQVLNKLAEIKKTVISPTQALLQDRESCVKALLKAQ 125
            M LDDKGR + GR+EFF+RN+ +L+KH+  ++  H+A GV  G+ FS ++K +AAQEPFADLQDRLV L+E+TERI+LERK  + DRA+ QVL KL E++  VI+PT+ALL+DR+ C+++L+KA+
Sbjct:    1 MALDDKGRMMRGRIEFFERNIHKLSKHLTTMVAQHKA-GVDVGMKFSERVKDVAAQEPFADLQDRLVALSEVTERIALERKGALCDRAEQQVLAKLTEVQTRVIAPTKALLKDRDECIQSLVKAE 124
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig112.1540.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FVS5_ECTSI4.000e-7085.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CPR2_9STRA8.000e-4256.80Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig112contigC-linearis_contig112:353639..354998 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig112.1540.1mRNA_C-linearis_contig112.1540.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig112 353639..354998 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig112.1540.1 ID=prot_C-linearis_contig112.1540.1|Name=mRNA_C-linearis_contig112.1540.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=127bp
MTLDDKGRRLHGRVEFFDRNVTQLTKHVQQIIGHHQADGVKHGINFSAKI
KTIAAQEPFADLQDRLVGLAELTERISLERKNIMIDRAKSQVLNKLAEIK
KTVISPTQALLQDRESCVKALLKAQEK
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