prot_C-linearis_contig112.1530.1 (polypeptide) Chordaria linearis ClinC8C monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-linearis_contig112.1530.1
Unique Nameprot_C-linearis_contig112.1530.1
Typepolypeptide
OrganismChordaria linearis ClinC8C monoicous (Chordaria linearis ClinC8C monoicous)
Sequence length344
Homology
BLAST of mRNA_C-linearis_contig112.1530.1 vs. uniprot
Match: A0A835YY77_9STRA (Cytochrome c biogenesis protein, thiol reduction transmembrane region, CcdA n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY77_9STRA)

HSP 1 Score: 280 bits (715), Expect = 8.600e-91
Identity = 159/231 (68.83%), Postives = 177/231 (76.62%), Query Frame = 0
Query:  112 MYGTGLLMSLSPCALSLLPLTISYIAGSEAEGAAEEAAEGREKGGFESLRGGFIPSAAFAAGLATVLSFLGLSATYAGKVMGSTSTFGGELGATVLPLVASTFAVTMGLNVLELVKLDLPSFEGGLEYMTSLPKNARAYLLGASSALVASPCCTPVLASILGFIATSQDPALGLVLLLTYSAGYTTPLMAAGTASGVLSRLMTAKGLNWITPASGALLISYGTYNGLEAIF 342
            MYGTGLLMS SPCALSLLPLTI YI G+E EG         E+GG  +    F+PSAAFA GLATVLS LGLSATYAGK+ GST   GG+ G   LPLV+S  A+  GLN+LEL+   LPS+E G+E   SLP+  RAY LGASSALVASPCCTPVLASILGF+A+SQDPALGL LLL YS GYTTPLMAAGTASG LSR+M+A GL WITP S A LISYGT+ GL AIF
Sbjct:    1 MYGTGLLMSFSPCALSLLPLTIGYIIGTEKEG---------EEGGSSNA---FLPSAAFAGGLATVLSVLGLSATYAGKLFGSTG-LGGDTGGLALPLVSSVIAIAAGLNLLELLNFTLPSWEAGVESFNSLPRVGRAYALGASSALVASPCCTPVLASILGFVASSQDPALGLALLLAYSLGYTTPLMAAGTASGALSRIMSASGLTWITPVSAAALISYGTFTGLGAIF 218          
BLAST of mRNA_C-linearis_contig112.1530.1 vs. uniprot
Match: A0A4D9CLR8_9STRA (DsbD domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CLR8_9STRA)

HSP 1 Score: 219 bits (557), Expect = 1.120e-64
Identity = 131/259 (50.58%), Postives = 173/259 (66.80%), Query Frame = 0
Query:   86 LFQLQQWAGDISATELTHVSPVTIGVMYGTGLLMSLSPCALSLLPLTISYIAGSEAEGAAEEAAEGREKGGFESLRGGFIPSAAFAAGLATVLSFLGLSATYAGKVMGSTSTFGGELGATVLPLVASTFAVTMGLNVLELVKLDLPSFEGGLEYMTSLPKNARAYLLGASSALVASPCCTPVLASILGFIATSQDPALGLVLLLTYSAGYTTPLMAAGTASGVLSRLMTAKG--LNWITPASGALLISYGTYNGLEAIF 342
            L+ +Q WA  +  T+LTH++PV+  V+YG GLL SLSPCALSL+PLT++Y+     + A ++             R     +A F  GLAT LS LGLSAT AGK+ GS     G LGA  LPL AS  A+ MGLN+L+LV L LPSF+  L+ +   P + +A+LLGA+SAL+ASPC TPVLASILGF+A S +P LG  LL +YS GY+TPL+ AG  SG ++  +  +G   +W+TPA+GALLISYGTY+ L  +F
Sbjct:  151 LYDIQIWAKQLVDTQLTHLTPVSGAVLYGAGLLTSLSPCALSLVPLTMAYLTDDGTDPARDQ-------------RTLLFRAATFTVGLATSLSVLGLSATLAGKLFGSAGA--GALGAA-LPLTASAVAIVMGLNLLDLVSLRLPSFDAALQ-LERFPPSLQAFLLGATSALIASPCSTPVLASILGFVAASGEPYLGAGLLFSYSLGYSTPLLLAGLLSGTVTSFIAKRGDGFSWVTPATGALLISYGTYSSLATLF 392          
BLAST of mRNA_C-linearis_contig112.1530.1 vs. uniprot
Match: A0A0G4H6S3_VITBC (DsbD domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4H6S3_VITBC)

HSP 1 Score: 202 bits (514), Expect = 1.830e-59
Identity = 125/267 (46.82%), Postives = 174/267 (65.17%), Query Frame = 0
Query:   86 LFQLQQWAGDISATELTHVSPVTIGVMYGTGLLMSLSPCALSLLPLTISYIAGSEAEGAAEEAAEGREKGGFESLRGGFIP---SAAFAAGLATVLSFLGLSATYAGKVMGSTSTFGGELGAT--VLPLVASTFAVTMGLNVLELVKLDLPSFEGG-LEYMTSLPKNARAYLLGASSALVASPCCTPVLASILGFIATSQDPALGLVLLLTYSAGYTTPLMAAGTASGVLSRLMTA----KGLNWITPASGALLISYGTYNGLEAIF 342
            +F +QQ AGDI A +L+H++PV++ V+Y +GL+ SLSPCALSLLPLTI+Y+AG  +    + +            R   IP   S  FAAGLAT LS LGL A+  G  +     FG   G    ++P+ AS  AV MGLNVL LV +  P+F+GG L+    LPK  + +L G +SAL+A+PC TPVL ++LG++A++ DP LG  LL  Y+ GY +P++AAGTASG L++L+T     +GL WITP +G LL+ YGT++ L A+F
Sbjct:   46 IFDVQQTAGDIVAYQLSHLTPVSLAVLYLSGLVTSLSPCALSLLPLTIAYLAGDSSTPTDDPS------------RPPPIPLSSSLMFAAGLATALSSLGLGASLLGMGL-----FGQTSGPAERIVPVAASVLAVVMGLNVLNLVSISFPAFDGGELDEGRKLPKALQDFLFGVTSALIATPCSTPVLTALLGYVASTGDPLLGAALLFAYTLGYASPVVAAGTASGRLAQLLTQGEGREGLRWITPVTGGLLVGYGTFSTLNALF 295          
BLAST of mRNA_C-linearis_contig112.1530.1 vs. uniprot
Match: A0A8J7FT87_9CYAN (Sulfite exporter TauE/SafE family protein n=2 Tax=Pseudanabaenales TaxID=2881377 RepID=A0A8J7FT87_9CYAN)

HSP 1 Score: 195 bits (496), Expect = 2.100e-57
Identity = 119/267 (44.57%), Postives = 176/267 (65.92%), Query Frame = 0
Query:   80 MFDA--TDLFQLQQWAGDISATELTHVSPVTIGVMYGTGLLMSLSPCALSLLPLTISYIAGSEAEGAAEEAAEGREKGGFESLRGGFIPSAAFAAGLATVLSFLGLSATYAGKVMGSTSTFGGELGATVLPLVASTFAVTMGLNVLELVKLDLPSFEGGLEYMTS-LPKNARAYLLGASSALVASPCCTPVLASILGFIATSQDPALGLVLLLTYSAGYTTPLMAAGTASGVLSRLMTAKGLN-WITPASGALLISYGTYNGLEAIF 342
            M DA  T L+QL+ +A  + +T+LTH++P+++G+++G GLL SL+PC LS+LP+TI YI G EA+   + A                I S  FA GLAT L+ LG++A   GKV G        +G   LP+V S  A+ MGLN+LE + L LP++ GG+E++++ LP+  R+YL+G +  LVASPC TPVLA++L +I+T+QDPALG VLLL Y+ GY  PL+ AGT +  + +++  +  + WITPASGALL+ +G ++ L  +F
Sbjct:    1 MLDALQTTLYQLEHFADGLVSTQLTHLTPLSVGIIFGAGLLTSLTPCMLSMLPITIGYIGGYEAKTRWQAA----------------IQSTWFALGLATTLAGLGIAAAIVGKVYGQVG-----IG---LPIVVSVIAILMGLNLLEALPLRLPAW-GGMEWISNDLPEGVRSYLIGLTFGLVASPCSTPVLATLLAWISTTQDPALGSVLLLAYATGYVAPLILAGTFTASIKKILEVRRWSGWITPASGALLVGFGVFSLLFRLF 242          
BLAST of mRNA_C-linearis_contig112.1530.1 vs. uniprot
Match: B4VM33_9CYAN (Cytochrome C biogenesis protein transmembrane region n=1 Tax=Coleofasciculus chthonoplastes PCC 7420 TaxID=118168 RepID=B4VM33_9CYAN)

HSP 1 Score: 192 bits (487), Expect = 4.540e-56
Identity = 117/262 (44.66%), Postives = 170/262 (64.89%), Query Frame = 0
Query:   84 TDLFQLQQWAGDISATELTHVSPVTIGVMYGTGLLMSLSPCALSLLPLTISYIAGSEAEGAAEEAAEGREKGGFESLRGGFIPSAAFAAGLATVLSFLGLSATYAGKVMGSTSTFGGELGATVLPLVASTFAVTMGLNVLELVKLDLPSFEGGLEYMT-SLPKNARAYLLGASSALVASPCCTPVLASILGFIATSQDPALGLVLLLTYSAGYTTPLMAAGTASGVLSRLMTAKGLN-WITPASGALLISYGTYNGLEAIFG 343
            T L+QL+Q+A ++   +LTH+S ++IG+++  GLL SL+PC LS+LP+TI YI G EA+G  + A +                S  FA GLAT L+ LG+ A   G+V G        +G   LP++ S  A+ MGLN+LE + L LPSF GG+E+++  LPK  R+YL+G +  LVASPC TPVLA++L ++A++QD  LG VLLL+Y+AGY TPL+ AGT +  + +L+  +  + WITP SGALL+ +G ++ L  I G
Sbjct:    7 TQLYQLEQFADNLVGNQLTHLSALSIGIIFAAGLLTSLTPCMLSMLPITIGYIGGYEAKGRLQAATQ----------------STWFALGLATTLAGLGILAASVGRVYGQVG-----IG---LPIIVSLIAIIMGLNLLEALPLQLPSF-GGMEWISPDLPKGIRSYLIGLTFGLVASPCSTPVLATLLAWVASTQDWVLGGVLLLSYTAGYVTPLIVAGTFTASIKKLLEVRQWSSWITPVSGALLVGFGVFSLLSRIPG 243          
BLAST of mRNA_C-linearis_contig112.1530.1 vs. uniprot
Match: UPI0019F72B38 (Sulfite exporter TauE/SafE family protein n=1 Tax=Synechococcales cyanobacterium C42_A2020_086 TaxID=2774344 RepID=UPI0019F72B38)

HSP 1 Score: 188 bits (477), Expect = 1.470e-54
Identity = 118/261 (45.21%), Postives = 168/261 (64.37%), Query Frame = 0
Query:   84 TDLFQLQQWAGDISATELTHVSPVTIGVMYGTGLLMSLSPCALSLLPLTISYIAGSEAEGAAEEAAEGREKGGFESLRGGFIPSAAFAAGLATVLSFLGLSATYAGKVMGSTSTFGGELGATVLPLVASTFAVTMGLNVLELVKLDLPSFEGGLEYM-TSLPKNARAYLLGASSALVASPCCTPVLASILGFIATSQDPALGLVLLLTYSAGYTTPLMAAGTASGVLSRLMTAKGLN-WITPASGALLISYGTYNGLEAIF 342
            T L+ L ++A  + + +LTH+S V+IGV++  GLL SL+PC LS+LP+TI YI G E +   + A                + S  FA GLAT L+ LG++AT  GKV G        LG   LP+V S  A+ MGLN+LE+V L LPS+ GG++++ T LP+  R+Y +G +  LVASPC TPVLA++L +++T+QDP LG VLLL Y+AGY  PL+ AGT +  + +L+  +  + WITPASGALLI +G ++ L  +F
Sbjct:    7 TGLYHLGRFADTLVSHQLTHLSLVSIGVIFLAGLLTSLTPCMLSMLPITIGYIGGYETKTRLQAA----------------VQSTWFALGLATTLAALGIAATVVGKVYGQVG-----LG---LPIVVSAIAILMGLNLLEIVPLRLPSW-GGMDWISTDLPEGVRSYFIGLTFGLVASPCSTPVLATLLAWVSTTQDPLLGSVLLLAYTAGYVAPLILAGTFTASIKKLLELRRWSGWITPASGALLIGFGVFSLLFRLF 242          
BLAST of mRNA_C-linearis_contig112.1530.1 vs. uniprot
Match: UPI001685ED0B (sulfite exporter TauE/SafE family protein n=2 Tax=unclassified Microcoleus TaxID=2642155 RepID=UPI001685ED0B)

HSP 1 Score: 187 bits (475), Expect = 2.750e-54
Identity = 113/255 (44.31%), Postives = 167/255 (65.49%), Query Frame = 0
Query:   84 TDLFQLQQWAGDISATELTHVSPVTIGVMYGTGLLMSLSPCALSLLPLTISYIAGSEAEGAAEEAAEGREKGGFESLRGGFIPSAAFAAGLATVLSFLGLSATYAGKVMGSTSTFGGELGATVLPLVASTFAVTMGLNVLELVKLDLPSFEGGLEYMTS-LPKNARAYLLGASSALVASPCCTPVLASILGFIATSQDPALGLVLLLTYSAGYTTPLMAAGTASGVLSRLMTAKGLN-WITPASGALLISYGTYN 336
            T L+QLQQ A  + +T+LTH+S +++G+++  GLL SL+PC LS+LP+TI YI G EA+   + AA+                S  F+ GLAT L+ LG+ A  AG+V G        +G   LP++ S  A+ MGLN+LE + L LPSF GG+E+++  LP+  R+YL+G +  +VASPC TPVLA++L +I+T++DP LG VLLL Y+AGY  PL+ AGT +  + +L+  +  + WITP SGALL+ +G ++
Sbjct:    7 TQLYQLQQLADQLVSTQLTHLSWMSVGIIFIAGLLTSLTPCMLSMLPITIGYIGGYEAKSRIQAAAQ----------------STWFSLGLATTLAALGILAAIAGQVYGQVG-----IG---LPIIVSIIAIIMGLNLLEALPLQLPSF-GGMEWISKDLPEGVRSYLIGLTFGIVASPCSTPVLATLLAWISTTKDPILGSVLLLFYTAGYVAPLILAGTFTASIKKLLELRRWSAWITPVSGALLVGFGVFS 236          
BLAST of mRNA_C-linearis_contig112.1530.1 vs. uniprot
Match: A0A1Z4JP11_LEPBY (Cytochrome c biogenesis protein, transmembrane region n=1 Tax=Leptolyngbya boryana NIES-2135 TaxID=1973484 RepID=A0A1Z4JP11_LEPBY)

HSP 1 Score: 187 bits (474), Expect = 3.660e-54
Identity = 114/261 (43.68%), Postives = 165/261 (63.22%), Query Frame = 0
Query:   80 MFDA--TDLFQLQQWAGDISATELTHVSPVTIGVMYGTGLLMSLSPCALSLLPLTISYIAGSEAEGAAEEAAEGREKGGFESLRGGFIPSAAFAAGLATVLSFLGLSATYAGKVMGSTSTFGGELGATVLPLVASTFAVTMGLNVLELVKLDLPSFEGGLEYMTS-LPKNARAYLLGASSALVASPCCTPVLASILGFIATSQDPALGLVLLLTYSAGYTTPLMAAGTASGVLSRLMTAKGLN-WITPASGALLISYGTYN 336
            MFD   T L++L Q+A  + +++LTH++PV+IGV++  GLL SL+PC LS+LP+T+ YI G EA+   + AA+                S  FA GLAT L+ LG++AT  G+V G   T         LP+V S  A+ MGLN+LE + L +P+  GG ++++  LP   R+YLLG    LVASPC TPVLA+IL +I+T++DP LG  LLL Y+AGY  PL+ AGT +  + +L+  +  + WITP SG LL+ +G ++
Sbjct:    1 MFDTFQTQLYELSQFADRLVSSQLTHITPVSIGVIFAAGLLTSLTPCTLSMLPITVGYIGGYEAKSRVQAAAQ----------------STWFALGLATTLAGLGIAATLFGRVYGQVGTG--------LPIVISVVAIIMGLNLLEALPLQMPTI-GGTDWISEELPTGVRSYLLGVMFGLVASPCSTPVLATILAWISTTKDPILGGSLLLCYTAGYVAPLIIAGTFTAAIKKLLELRRWSGWITPTSGVLLVGFGVFS 236          
BLAST of mRNA_C-linearis_contig112.1530.1 vs. uniprot
Match: A0A0S3U077_9CYAN (Cytochrome C biogenesis protein, transmembrane region n=5 Tax=Cyanobacteria TaxID=1117 RepID=A0A0S3U077_9CYAN)

HSP 1 Score: 186 bits (473), Expect = 5.160e-54
Identity = 114/255 (44.71%), Postives = 162/255 (63.53%), Query Frame = 0
Query:   84 TDLFQLQQWAGDISATELTHVSPVTIGVMYGTGLLMSLSPCALSLLPLTISYIAGSEAEGAAEEAAEGREKGGFESLRGGFIPSAAFAAGLATVLSFLGLSATYAGKVMGSTSTFGGELGATVLPLVASTFAVTMGLNVLELVKLDLPSFEGGLEYMTS-LPKNARAYLLGASSALVASPCCTPVLASILGFIATSQDPALGLVLLLTYSAGYTTPLMAAGTASGVLSRLMTAKGLN-WITPASGALLISYGTYN 336
            T L++L Q+A  + +++L H++PV+IGV++  GLL SL+PC LS+LP+TI YI G EA+   + AA+                S  F+ GLAT L+ LG+ AT  GKV G   T         LP+V S  A+ MGLN+LE +   +PS  GG E++++ LP   R+YLLG +  LVASPC TPVLA+IL +IA++ DP LG  LLL Y+AGY  PL+ AGT +  + +L+  +  + WITPASGALL+ +G ++
Sbjct:    7 TQLYELSQFADRLVSSQLAHITPVSIGVIFAAGLLTSLTPCTLSMLPITIGYIGGYEAKSRLQAAAQ----------------STWFSLGLATTLAGLGIGATLLGKVYGQVGTG--------LPIVVSVVAILMGLNLLEALPFAMPSI-GGTEWISNELPAGVRSYLLGVTFGLVASPCSTPVLATILAWIASTGDPILGGSLLLCYTAGYVAPLILAGTFTAAIKKLLELRRWSAWITPASGALLVGFGVFS 236          
BLAST of mRNA_C-linearis_contig112.1530.1 vs. uniprot
Match: A0A7C3VSL6_9CYAN (Cytochrome c biogenesis protein CcdA n=1 Tax=Planktothricoides sp. SpSt-374 TaxID=2282167 RepID=A0A7C3VSL6_9CYAN)

HSP 1 Score: 186 bits (473), Expect = 5.480e-54
Identity = 114/254 (44.88%), Postives = 162/254 (63.78%), Query Frame = 0
Query:   84 TDLFQLQQWAGDISATELTHVSPVTIGVMYGTGLLMSLSPCALSLLPLTISYIAGSEAEGAAEEAAEGREKGGFESLRGGFIPSAAFAAGLATVLSFLGLSATYAGKVMGSTSTFGGELGATVLPLVASTFAVTMGLNVLELVKLDLPSFEGGLEYMTSLPKNARAYLLGASSALVASPCCTPVLASILGFIATSQDPALGLVLLLTYSAGYTTPLMAAGTASGVLSRLMTAKGLN-WITPASGALLISYGTYN 336
            T L+QLQQ+A  I + +LTH++ V+IG+++  GLL SL+PC LS+LP+TI YI GSE +   + A                + S  FA GLAT L+ LG++A + GKV G        LG   LP+V S  A+ MGLN+LE + L LPSF+G      +L   AR+YLLG +  LVASPC TPVLA++L ++AT++D  LG  LLL+Y+AGY  PL+ AGT +G + +L+  +  + WI+PASG LL+ +G ++
Sbjct:    7 TTLYQLQQFANTIVSGQLTHITIVSIGLIFIAGLLTSLTPCMLSMLPITIGYIGGSETKSRTQAA----------------LQSTWFALGLATTLAGLGIAAAFLGKVYGQIG-----LG---LPIVVSVVAIIMGLNLLEALPLQLPSFDGMQFLPANLSGGARSYLLGLTFGLVASPCSTPVLATLLAWVATTKDLILGAALLLSYTAGYVAPLILAGTFTGTIKKLLEWRRWSAWISPASGVLLVGFGVFS 236          
The following BLAST results are available for this feature:
BLAST of mRNA_C-linearis_contig112.1530.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YY77_9STRA8.600e-9168.83Cytochrome c biogenesis protein, thiol reduction t... [more]
A0A4D9CLR8_9STRA1.120e-6450.58DsbD domain-containing protein n=2 Tax=Monodopsida... [more]
A0A0G4H6S3_VITBC1.830e-5946.82DsbD domain-containing protein n=1 Tax=Vitrella br... [more]
A0A8J7FT87_9CYAN2.100e-5744.57Sulfite exporter TauE/SafE family protein n=2 Tax=... [more]
B4VM33_9CYAN4.540e-5644.66Cytochrome C biogenesis protein transmembrane regi... [more]
UPI0019F72B381.470e-5445.21Sulfite exporter TauE/SafE family protein n=1 Tax=... [more]
UPI001685ED0B2.750e-5444.31sulfite exporter TauE/SafE family protein n=2 Tax=... [more]
A0A1Z4JP11_LEPBY3.660e-5443.68Cytochrome c biogenesis protein, transmembrane reg... [more]
A0A0S3U077_9CYAN5.160e-5444.71Cytochrome C biogenesis protein, transmembrane reg... [more]
A0A7C3VSL6_9CYAN5.480e-5444.88Cytochrome c biogenesis protein CcdA n=1 Tax=Plank... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003834Cytochrome C biogenesis protein, transmembrane domainPFAMPF02683DsbDcoord: 113..335
e-value: 2.8E-32
score: 112.4
NoneNo IPR availablePANTHERPTHR31272FAMILY NOT NAMEDcoord: 86..341
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 164..187
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 336..343
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 188..206
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 107..129
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 130..163
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 249..276
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 277..281
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..106
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 229..248
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 317..335
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 306..316
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 282..305
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 207..228
NoneNo IPR availableTMHMMTMhelixcoord: 320..342
NoneNo IPR availableTMHMMTMhelixcoord: 163..185
NoneNo IPR availableTMHMMTMhelixcoord: 283..305
NoneNo IPR availableTMHMMTMhelixcoord: 198..220
NoneNo IPR availableTMHMMTMhelixcoord: 254..276

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-linearis_contig112contigC-linearis_contig112:278430..280958 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Chordaria linearis ClinC8C monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-linearis_contig112.1530.1mRNA_C-linearis_contig112.1530.1Chordaria linearis ClinC8C monoicousmRNAC-linearis_contig112 278395..281447 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-linearis_contig112.1530.1 ID=prot_C-linearis_contig112.1530.1|Name=mRNA_C-linearis_contig112.1530.1|organism=Chordaria linearis ClinC8C monoicous|type=polypeptide|length=344bp
MRTFVAGTVAALATLRADSFSVRAGVPQSSLQVTVHHSFCSTASGSSVAA
SSSSRPWARNIKRPRAGRSIGKGAAGSLSMFDATDLFQLQQWAGDISATE
LTHVSPVTIGVMYGTGLLMSLSPCALSLLPLTISYIAGSEAEGAAEEAAE
GREKGGFESLRGGFIPSAAFAAGLATVLSFLGLSATYAGKVMGSTSTFGG
ELGATVLPLVASTFAVTMGLNVLELVKLDLPSFEGGLEYMTSLPKNARAY
LLGASSALVASPCCTPVLASILGFIATSQDPALGLVLLLTYSAGYTTPLM
AAGTASGVLSRLMTAKGLNWITPASGALLISYGTYNGLEAIFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003834Cyt_c_assmbl_TM_dom